CuGenDBv2

Gene ID	Spg038268
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	microspore-specific promoter 2
Genome location	scaffold12:40787096..40789236
RNA-Seq Expression	Spg038268
Synteny	Spg038268
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6606250.1 hypothetical protein SDJN03_03567, partial [Cucurbita argyrosperma subsp. sororia]

2.4e-71

70.82

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Query:  MEDYAK-LPPHPQH-SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSS
        MEDYAK LP HPQH SSSSSMTLFSRLD++D+VMK LEKKQRLER+GG       +E++CISLDVALKDTYFKGSLLDRVA+LEHRLFQLCLEMDSGSSS
Subjt:  MEDYAK-LPPHPQH-SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSS

Query:  NPSSLTSTQTSAEISCSS--PKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQL
        NPSSL STQTSA+IS SS  PKQF R E SSSYP FHYP+HGGTSKISQ+Q                          EK Q TQRH+QKKKQ SP K QL
Subjt:  NPSSLTSTQTSAEISCSS--PKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQL

Query:  GKTRTGKDEVGSCKNVKKGIPPPKWPHLRMFGC
        GKTR+GKDE GSCKNVKKGI PPKW HLRM  C
Subjt:  GKTRTGKDEVGSCKNVKKGIPPPKWPHLRMFGC

XP_022930921.1 uncharacterized protein LOC111437264 [Cucurbita moschata]

7.3e-73

71.67

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Query:  MEDYAK-LPPHPQH-SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSS
        MEDYAK LP HPQH SSSSSMTLFSRLD++D+VMK LEKKQRLER+GG       +E++CISLDVALKDTYFKGSLLDRVA+LEHRLFQLCLEMDSGSSS
Subjt:  MEDYAK-LPPHPQH-SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSS

Query:  NPSSLTSTQTSAEISCSS--PKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQL
        NPSSL STQTSA+IS SS  PKQF R E SSSYP FHYP+HGGTSKISQ+Q                          EK Q TQRH+QKKKQ SP K QL
Subjt:  NPSSLTSTQTSAEISCSS--PKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQL

Query:  GKTRTGKDEVGSCKNVKKGIPPPKWPHLRMFGC
        GKTR+GKDE GSCKNVKKGI PPKW HLRMFGC
Subjt:  GKTRTGKDEVGSCKNVKKGIPPPKWPHLRMFGC

XP_022996286.1 uncharacterized protein LOC111491560 [Cucurbita maxima]

6.6e-74

72.1

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Query:  MEDYAKLPP-HPQH-SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSS
        MEDYAKL P HPQH SSSSSMTLFSRLD++D+VMK LEKKQRLER+GG       +E++CISLDVALKDTYFKGSLLDRVA+LEHRLFQLCLEMDSGSSS
Subjt:  MEDYAKLPP-HPQH-SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSS

Query:  NPSSLTSTQTSAEISCSS--PKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQL
        NPSSL STQTSA+IS SS  PKQF R E SSSYP FHYP+HGGTSKISQ+Q                          EKPQ TQRH+QKKKQ SP K QL
Subjt:  NPSSLTSTQTSAEISCSS--PKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQL

Query:  GKTRTGKDEVGSCKNVKKGIPPPKWPHLRMFGC
        GKTR+GKDE GSCKNVKKGI PPKW HLRMFGC
Subjt:  GKTRTGKDEVGSCKNVKKGIPPPKWPHLRMFGC

XP_023532991.1 uncharacterized protein LOC111795001 [Cucurbita pepo subsp. pepo]

8.6e-74

72.1

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Query:  MEDYAK-LPPHPQH-SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSS
        MEDYAK LP HPQH SSSSSMTLFSRLD++D+VMK LEKKQRLER+GG       +E++CISLDVALKDTYFKGSLLDRVA+LEHRLFQLCLEMDSGSSS
Subjt:  MEDYAK-LPPHPQH-SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSS

Query:  NPSSLTSTQTSAEISCSS--PKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQL
        NPSSL STQTSA+IS SS  PKQF R E SSSYP FHYP+HGGTSKISQ+Q                          EKPQ TQRH+QKKKQ SP K QL
Subjt:  NPSSLTSTQTSAEISCSS--PKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQL

Query:  GKTRTGKDEVGSCKNVKKGIPPPKWPHLRMFGC
        GKTR+GKDE GSCKNVKKGI PPKW HLRMFGC
Subjt:  GKTRTGKDEVGSCKNVKKGIPPPKWPHLRMFGC

XP_038888525.1 uncharacterized protein LOC120078343 [Benincasa hispida]

1.4e-71

71.55

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Query:  EDYAKLPPHPQH--SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSSN
        ++ AKL  HPQH  SSSSSMTLFSRLDHLD VMKDLEKKQRL R GGS N EE ME+RCISLDVALKDTYFKGSLLDRVA LE+RLFQLCLEMDSG+SSN
Subjt:  EDYAKLPPHPQH--SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSSN

Query:  PSSLTSTQTSAEI-SCSSPKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQ-LG
        PSSLTS+QTS EI S SSPKQF R + SSSYPTFHYPNHG TS+ISQ+Q                          EKP   QR QQKK Q S SKGQ +G
Subjt:  PSSLTSTQTSAEI-SCSSPKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQ-LG

Query:  KTRTGKDEVGSCKNVKKGIPPPKWPHLRMFGC
        KTRT KDEVGSCKNVKKGIP  KWPHLRMFGC
Subjt:  KTRTGKDEVGSCKNVKKGIPPPKWPHLRMFGC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LEC6 Uncharacterized protein

6.9e-61

64.44

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Query:  EDYAKLPPHPQH--SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSSN
        +D  KL PHPQ   SSSSSMTLFSRLDHLD VMK+LEKKQRLER+ G +N EE M  R IS+DVALKDTY KGSLLDRVAALEHRL QLCLEM+SGSSSN
Subjt:  EDYAKLPPHPQH--SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSSN

Query:  PSSL-TSTQTSAEI---SCSSPKQF-SRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKG
        PSSL TS+QTS+ +   S SSPK+F + + SSSSYPTFHYPN+G TS++SQ Q                          EKP   QR QQKKKQ S  KG
Subjt:  PSSL-TSTQTSAEI---SCSSPKQF-SRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKG

Query:  Q--LGKTRTGKDEVGSCKNVKKGIPPP--KWPHLRMFGC
        Q  +GKT T KDEVGSCKNVKKG  P   KWPHLRMFGC
Subjt:  Q--LGKTRTGKDEVGSCKNVKKGIPPP--KWPHLRMFGC

A0A1S3CRK1 uncharacterized protein LOC103503541

2.9e-43

72.26

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Query:  PHPQHSSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDS-GSSSNPSSLT-ST
        P    SSSSSMTLFSRLDHLD VMKDLEKKQRLER+ G +N EE M  R IS+DVALKDTYFKGSLLDRVAALEHRL QLCLEM+S GSSSNPSSLT S+
Subjt:  PHPQHSSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDS-GSSSNPSSLT-ST

Query:  QTSAEI--SCSSPKQFSRRESS--SSYPTFHYPNHGGTSKISQVQLMSFELLNIL
        QTS EI  S SSPK F   +SS  SSYPTFHYPN+G TS+ISQ Q+  F+   I+
Subjt:  QTSAEI--SCSSPKQFSRRESS--SSYPTFHYPNHGGTSKISQVQLMSFELLNIL

A0A6J1DZI5 uncharacterized protein LOC111026052

2.5e-71

70.13

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Query:  MEDYAKLPPHPQHSSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSSNP
        MED AKL   PQHSSSSSMTL SRLDHLD VMK LE+KQ L             ERRC+SLDVALKDTYFKGSLLDRVAALEHRLFQLCL+MDSGSS+NP
Subjt:  MEDYAKLPPHPQHSSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSSNP

Query:  SSLTSTQTSAEI-SCSSPKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQLGKT
        SS TST+ S EI S SSPKQF R E SSSYPTFHYP+HGGTS+ISQVQ                          EKP   QRHQQKKKQ SPSKGQLGKT
Subjt:  SSLTSTQTSAEI-SCSSPKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQLGKT

Query:  RTG-KDEVGSCKNVKKGIPPPKWPHLRMFGC
        R+G KDE GSCKNVKKGIPPPKWPHLRMFGC
Subjt:  RTG-KDEVGSCKNVKKGIPPPKWPHLRMFGC

A0A6J1ES90 uncharacterized protein LOC111437264

3.5e-73

71.67

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Query:  MEDYAK-LPPHPQH-SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSS
        MEDYAK LP HPQH SSSSSMTLFSRLD++D+VMK LEKKQRLER+GG       +E++CISLDVALKDTYFKGSLLDRVA+LEHRLFQLCLEMDSGSSS
Subjt:  MEDYAK-LPPHPQH-SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSS

Query:  NPSSLTSTQTSAEISCSS--PKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQL
        NPSSL STQTSA+IS SS  PKQF R E SSSYP FHYP+HGGTSKISQ+Q                          EK Q TQRH+QKKKQ SP K QL
Subjt:  NPSSLTSTQTSAEISCSS--PKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQL

Query:  GKTRTGKDEVGSCKNVKKGIPPPKWPHLRMFGC
        GKTR+GKDE GSCKNVKKGI PPKW HLRMFGC
Subjt:  GKTRTGKDEVGSCKNVKKGIPPPKWPHLRMFGC

A0A6J1K4A8 uncharacterized protein LOC111491560

3.2e-74

72.1

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Query:  MEDYAKLPP-HPQH-SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSS
        MEDYAKL P HPQH SSSSSMTLFSRLD++D+VMK LEKKQRLER+GG       +E++CISLDVALKDTYFKGSLLDRVA+LEHRLFQLCLEMDSGSSS
Subjt:  MEDYAKLPP-HPQH-SSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSS

Query:  NPSSLTSTQTSAEISCSS--PKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQL
        NPSSL STQTSA+IS SS  PKQF R E SSSYP FHYP+HGGTSKISQ+Q                          EKPQ TQRH+QKKKQ SP K QL
Subjt:  NPSSLTSTQTSAEISCSS--PKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQL

Query:  GKTRTGKDEVGSCKNVKKGIPPPKWPHLRMFGC
        GKTR+GKDE GSCKNVKKGI PPKW HLRMFGC
Subjt:  GKTRTGKDEVGSCKNVKKGIPPPKWPHLRMFGC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G46795.1 microspore-specific promoter 2

3.9e-16

31.05

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Query:  QHSSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSSNPSSLTSTQTSAE
        Q  S SS+ + SRL+HLD V+K+LE++Q L +     +      R  I    A+++ YFKGSLLDR+AALE RLFQ+CLE++S S S+ S+  S +TS+ 
Subjt:  QHSSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSSNPSSLTSTQTSAE

Query:  ISCSSPKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQLGKTRTGKDEVGSCK-
               Q  +R+ + + P F       +S I+   +      ++   E       +  ++ EKP + +++++ KK                D   +CK 
Subjt:  ISCSSPKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQLGKTRTGKDEVGSCK-

Query:  NVKKGIPPPKWPHLRMFGC
          KK   P KW    + GC
Subjt:  NVKKGIPPPKWPHLRMFGC

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAGATTATGCAAAGTTACCCCCTCATCCACAGCATTCCTCCTCTTCCTCAATGACCCTTTTTTCTAGATTGGATCATTTGGATATTGTTATGAAGGATTTGGAGAA
AAAACAGAGGTTGGAAAGAATTGGAGGCAGTAATAATTCAGAAGAAAGGATGGAAAGAAGGTGCATATCTTTGGATGTTGCACTAAAAGATACTTACTTTAAAGGTTCAT
TGTTGGATAGAGTGGCAGCTCTTGAGCATAGACTTTTTCAGCTATGTTTGGAGATGGATTCTGGTAGTTCCTCAAATCCTTCATCATTAACTTCAACACAAACATCAGCA
GAGATCAGTTGTTCTTCTCCAAAACAGTTTAGTAGAAGGGAATCATCTTCTTCATATCCCACATTCCACTATCCCAACCATGGAGGAACCTCAAAAATTTCTCAAGTTCA
GTTGATGTCCTTTGAGCTATTGAATATTTTAACTGATGAGATGTCGAGTTCATGGCGATACCAAGCGTCGGTAGATTCGGAGAAGCCTCAAATAACTCAAAGACATCAAC
AGAAAAAGAAGCAACTGAGTCCTTCAAAAGGGCAACTTGGAAAGACAAGGACTGGAAAGGATGAAGTGGGATCTTGCAAAAATGTCAAGAAAGGGATTCCTCCTCCCAAA
TGGCCACACTTGAGGATGTTTGGTTGCTAA

mRNA sequence

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Protein sequence

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MEDYAKLPPHPQHSSSSSMTLFSRLDHLDIVMKDLEKKQRLERIGGSNNSEERMERRCISLDVALKDTYFKGSLLDRVAALEHRLFQLCLEMDSGSSSNPSSLTSTQTSA
EISCSSPKQFSRRESSSSYPTFHYPNHGGTSKISQVQLMSFELLNILTDEMSSSWRYQASVDSEKPQITQRHQQKKKQLSPSKGQLGKTRTGKDEVGSCKNVKKGIPPPK
WPHLRMFGC

Spg038268 (gene) of Sponge gourd (cylindrica) v1 genome