CuGenDBv2

Gene ID	Spg038275
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ferredoxin
Genome location	scaffold12:40619855..40621384
RNA-Seq Expression	Spg038275
Synteny	Spg038275
Gene Ontology terms	GO:0022900 - electron transport chain (biological process) GO:0009507 - chloroplast (cellular component) GO:0009055 - electron transfer activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAF7828558.1 ferredoxin isoform X1 [Senna tora]

3.5e-22

85.96

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Query:  FIGYWGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
        ++ + GYALLCVGFPTSD+EVETQDEDEVYWLQFGRYFARGP+ERDDYALELAM DE
Subjt:  FIGYWGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

KYP35983.1 Ferredoxin-2 [Cajanus cajan]

4.1e-23

89.66

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Query:  VFIGYWGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
        +FI + GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGP+ERDDYALELAM DE
Subjt:  VFIGYWGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

KZM87870.1 hypothetical protein DCAR_024971 [Daucus carota subsp. sativus]

7.0e-23

96.23

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Query:  WGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
        WGYALLCVGFPTSD+EVETQDEDEVYWLQFGRYFARGPIERDDYALELAM DE
Subjt:  WGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

TKY55562.1 Ferredoxin-2 protein [Spatholobus suberectus]

4.1e-23

89.66

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Query:  VFIGYWGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
        +FI + GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGP+ERDDYALELAM DE
Subjt:  VFIGYWGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

XP_022930965.1 uncharacterized protein LOC111437299 [Cucurbita moschata]

3.5e-22

100

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Query:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
        GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
Subjt:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

TrEMBL top hits

e value

%identity

Alignment

A0A151R0E4 Ferredoxin-2

2.0e-23

89.66

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Query:  VFIGYWGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
        +FI + GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGP+ERDDYALELAM DE
Subjt:  VFIGYWGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

A0A161ZNI2 2Fe-2S ferredoxin-type domain-containing protein

3.4e-23

96.23

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Query:  WGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
        WGYALLCVGFPTSD+EVETQDEDEVYWLQFGRYFARGPIERDDYALELAM DE
Subjt:  WGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

A0A6J1GKE0 Ferredoxin

1.7e-22

100

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Query:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
        GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
Subjt:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

A0A6J1I4R5 Ferredoxin

1.7e-22

100

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Query:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
        GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
Subjt:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

A0A6J1K5R4 Ferredoxin

1.7e-22

100

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Query:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
        GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
Subjt:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

SwissProt top hits

e value

%identity

Alignment

P08451 Ferredoxin-2

3.1e-05

61.29

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Query:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGR
        GY LLCV +P SD+++ET  EDE+Y LQFG+
Subjt:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGR

Q9C7Y4 Ferredoxin C 2, chloroplastic

2.9e-24

96.15

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Query:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
        GYALLCVGFPTSD+EVETQDEDEVYWLQFGRYFARGPIERDDYALELAM DE
Subjt:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

Arabidopsis top hits

e value

%identity

Alignment

AT1G32550.1 2Fe-2S ferredoxin-like superfamily protein

2.1e-25

96.15

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Query:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
        GYALLCVGFPTSD+EVETQDEDEVYWLQFGRYFARGPIERDDYALELAM DE
Subjt:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

AT1G32550.2 2Fe-2S ferredoxin-like superfamily protein

2.1e-25

96.15

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Query:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE
        GYALLCVGFPTSD+EVETQDEDEVYWLQFGRYFARGPIERDDYALELAM DE
Subjt:  GYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

Sequences

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CDS sequence

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ATGGCAAGGTTTGGTAGAAGCAAACTACTGCTCATTGAGGATGAGGATAACGTTGTTGAGTTTGTATTCATAGGTTACTGGGGGTATGCACTTCTTTGCGTAGGTTTTCC
AACCTCAGATGTTGAAGTAGAAACGCAAGATGAGGATGAGGTATATTGGCTTCAATTTGGAAGATATTTTGCTCGGGGACCAATTGAGAGAGATGACTATGCTCTGGAGT
TGGCCATGGCTGATGAGTAA

mRNA sequence

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Protein sequence

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MARFGRSKLLLIEDEDNVVEFVFIGYWGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMADE

Spg038275 (gene) of Sponge gourd (cylindrica) v1 genome