; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038280 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038280
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionexosome complex component RRP4 homolog
Genome locationscaffold12:43408433..43414938
RNA-Seq ExpressionSpg038280
SyntenySpg038280
Gene Ontology termsGO:0000178 - exosome (RNase complex) (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004088 - K Homology domain, type 1
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1
IPR026699 - Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606437.1 Exosome complex component RRP4-like protein, partial [Cucurbita argyrosperma subsp. sororia]7.9e-17294.58Show/hide
Query:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV
        MRGLQ+SLNQTQKIRLQRALETLESISSKANSDASV++ADTIPLNYED VLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRAR     YKPEVGDI+
Subjt:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV

Query:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
        VGRVTEVAPKRWRLDINYSQ+AVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
Subjt:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH

Query:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS
        FHHLEQYGIDLILGCNGFIWIGEHVDP EDMM+ED +NKSEQKGSKFEGS GNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS
Subjt:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS

Query:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG
        LNIDVHEMLGSEFCVLTAEKEA RRTSSKKRG
Subjt:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG

KAG7036378.1 Exosome complex component RRP4-like protein [Cucurbita argyrosperma subsp. argyrosperma]6.0e-17292.65Show/hide
Query:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTL--------Y
        MRGLQ+SLNQTQKIRLQRALETLESISSKANSDASV++ADTIPLNYED VLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRAR S  +        Y
Subjt:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTL--------Y

Query:  KPEVGDIVVGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
        KPEVGDI+VGRVTEVAPKRWRLDINYSQ+AVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY
Subjt:  KPEVGDIVVGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPY

Query:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
        LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDP EDMM+ED +NKSEQKGSKFEGS GNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM
Subjt:  LVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIM

Query:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG
        ETVSLSISLNIDVHEMLGSEFCVLTAEKEA RRTSSKKRG
Subjt:  ETVSLSISLNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG

XP_022931250.1 exosome complex component RRP4 homolog [Cucurbita moschata]1.1e-17094.55Show/hide
Query:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV
        MRGLQ+SLNQTQKIRLQRALETLESISSKANSDASV++ADTIPLNYED VLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRAR     YKPEVGDI+
Subjt:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV

Query:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
        VGRVTEVAPKRWRLDINYSQ+AVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
Subjt:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH

Query:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS
        FHHLEQYGIDLILGCNGFIWIGEHVDP EDMM+ED +NKSEQKGSKFEGS GNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS
Subjt:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS

Query:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKK
        LNIDVHEMLGSEFCVLTAEKEA RRTSSKK
Subjt:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKK

XP_022995373.1 exosome complex component RRP4 homolog [Cucurbita maxima]6.7e-17194.28Show/hide
Query:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV
        MRGLQ+SLNQTQKIRLQRALETLESISSKANSDASV++ADTIPLNYED VLKGHGTLDL GEVVATICGVVERVNKLIYVRALRAR     YKPEVGDI+
Subjt:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV

Query:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
        VGRVTEVAPKRWRLDINYSQ+AVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
Subjt:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH

Query:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS
        FHHLEQYGIDLILGCNGFIWIGEHVDP EDMM+ED +NKSEQKGSKFEGS GNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS
Subjt:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS

Query:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG
        LNIDVHEMLGSEFCVLTAEKEA RRTSSKKRG
Subjt:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG

XP_023533481.1 exosome complex component RRP4 homolog [Cucurbita pepo subsp. pepo]5.1e-17193.98Show/hide
Query:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV
        MRGLQ+SLNQTQKIRLQRALETLESISSKANSDASV++ADTIPLNYED VLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRAR     YKPEVGDI+
Subjt:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV

Query:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
        VGRVTEVAPKRWRLDINYSQ+AVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
Subjt:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH

Query:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS
        FHHLEQYGIDLILGCNGFIWIGEHVDP EDMM+ED +NKSEQKGSKFEG+ GNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSL IS
Subjt:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS

Query:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG
        LNIDVHEMLGSEFCVLTAEKEA RRTSSKKRG
Subjt:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG

TrEMBL top hitse value%identityAlignment
A0A6J1DQ00 exosome complex component RRP4 homolog isoform X14.0e-16187.83Show/hide
Query:  LNADMRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEV
        L  DMRGLQISLNQTQKIRLQ ALE+LESIS KANSDASVI+ADTIP+NYED +LKGHGT DL+GEVVAT+CGVVERVNKLIYVRALRAR     YKPEV
Subjt:  LNADMRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEV

Query:  GDIVVGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKR
        GDIVVGRV EVAPKRWRLDINYSQ AVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKR
Subjt:  GDIVVGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKR

Query:  RKQHFHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGN-QVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETV
        RKQHFHHLEQYGIDLILGCNGFIWIGEHVDPAEDMM+EDQVNK EQKG K EG+ GN + QER+YTPLETR+NICR ANA+RVLS LGFI++VEVIMETV
Subjt:  RKQHFHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGN-QVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETV

Query:  SLSISLNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG
        +LS+SLNIDVHEMLGSEFCVL AE E  RRTSSKKRG
Subjt:  SLSISLNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG

A0A6J1EXY1 exosome complex component RRP4 homolog5.5e-17194.55Show/hide
Query:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV
        MRGLQ+SLNQTQKIRLQRALETLESISSKANSDASV++ADTIPLNYED VLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRAR     YKPEVGDI+
Subjt:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV

Query:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
        VGRVTEVAPKRWRLDINYSQ+AVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
Subjt:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH

Query:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS
        FHHLEQYGIDLILGCNGFIWIGEHVDP EDMM+ED +NKSEQKGSKFEGS GNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS
Subjt:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS

Query:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKK
        LNIDVHEMLGSEFCVLTAEKEA RRTSSKK
Subjt:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKK

A0A6J1HGD9 exosome complex component RRP4 homolog isoform X15.7e-16892.77Show/hide
Query:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV
        MR LQISLNQTQKIRLQRALE LESISSKANSDASVI+ADTIPLNY+D VLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRAR     YKPEVGDI+
Subjt:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV

Query:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
        VGRVTEVAPKRWRL+INYSQ+AVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
Subjt:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH

Query:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS
        FHHLEQYGIDLI GCNGFIWIGEHVDP EDMM+EDQVNKSEQKGSKFEG+ GNQVQER+YTPLETRQNICRTANAIRVLS LGFIM+VEVIMETVSLS S
Subjt:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS

Query:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG
        LNI+VHEMLGSEFCVLTAEKEA RRTSSKKRG
Subjt:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG

A0A6J1HVC7 exosome complex component RRP4 homolog isoform X11.5e-16390.66Show/hide
Query:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV
        MR LQISLNQTQ+IRLQRALE LESISSKANSDASVI+ADTIPLNY+D VLKGHGTLDLNGEVVATICGVVER+NKLIYVRALRAR     YKPEVGDI+
Subjt:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV

Query:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
        VGRVTEVAPKRWRL+INYSQ+AVLMLSSMNLPDGIQRR+TA DELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGK+ERGQLLTVSPYLVKRRKQH
Subjt:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH

Query:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS
        FHHLEQYGIDLI GCNGFI IGE VDP EDMM+EDQVNKSEQKGSKFEG+ GNQVQER+YTPLETRQNICRTANAIRVLS LGFIM+VEVIMETVSLS+S
Subjt:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS

Query:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG
        LNI+VHEMLGSEFCVLTAEKEA RRTSSKKRG
Subjt:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG

A0A6J1K7S0 exosome complex component RRP4 homolog3.2e-17194.28Show/hide
Query:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV
        MRGLQ+SLNQTQKIRLQRALETLESISSKANSDASV++ADTIPLNYED VLKGHGTLDL GEVVATICGVVERVNKLIYVRALRAR     YKPEVGDI+
Subjt:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV

Query:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
        VGRVTEVAPKRWRLDINYSQ+AVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH
Subjt:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQH

Query:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS
        FHHLEQYGIDLILGCNGFIWIGEHVDP EDMM+ED +NKSEQKGSKFEGS GNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS
Subjt:  FHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSIS

Query:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG
        LNIDVHEMLGSEFCVLTAEKEA RRTSSKKRG
Subjt:  LNIDVHEMLGSEFCVLTAEKEAGRRTSSKKRG

SwissProt top hitse value%identityAlignment
Q09704 Exosome complex component rrp48.5e-4441.44Show/hide
Query:  LKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIVVGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSI
        ++GHGT   +G + A++ G V+RVNKLI V+ LR++     Y PE+GD+++G++ EV PKRW++DI   QNAVLMLSS+NLP GIQRR+   DEL MRS 
Subjt:  LKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIVVGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSI

Query:  FEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEG
        F+E D++ AEV+ +  DG + +  RS KYGKL  G  L V P LV R K H + L   G+D+IL  NG++W+ +H    E+      + + E++ S+   
Subjt:  FEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEG

Query:  SLGNQVQERI--YTPLE-TRQNICRTANAIRVL-----SILGFIMSVEVIMETVSLSISLNID
        S+ +   + I  YT L  +R +IC    A R L     SI  F  S  V      L++  N+D
Subjt:  SLGNQVQERI--YTPLE-TRQNICRTANAIRVL-----SILGFIMSVEVIMETVSLSISLNID

Q13868 Exosome complex component RRP46.7e-4148.57Show/hide
Query:  KIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIVVGRVTEVAPKRW
        ++RL  A + L     +      V+  DTI    +   ++GHGT     +++A++ G VERVNKLI V+AL+ R     Y  EVGDIVVGR+TEV  KRW
Subjt:  KIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIVVGRVTEVAPKRW

Query:  RLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDL
        +++ N   ++VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +
Subjt:  RLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDL

Query:  ILGCNGFIWI
        ILG NGFIWI
Subjt:  ILGCNGFIWI

Q2KID0 Exosome complex component RRP47.9e-4247.03Show/hide
Query:  KIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIVVGRVTEVAPKRW
        ++RL  A + L     + +    V+  DTI    +   ++GHGT     +++A++ G VERVNKLI V+AL+ R     Y  EVGDIVVGR+TEV  KRW
Subjt:  KIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIVVGRVTEVAPKRW

Query:  RLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDL
        +++ N   ++VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +
Subjt:  RLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDL

Query:  ILGCNGFIWIGEHVDPAED
        ILG NGFIW+    +  ED
Subjt:  ILGCNGFIWIGEHVDPAED

Q8VBV3 Exosome complex component RRP43.6e-4248.17Show/hide
Query:  KIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIVVGRVTEVAPKRW
        ++RL +A + L     + +    V+  DTI    +   ++GHGT     +++A++ G VERVNKLI V+AL+ R     Y  EVGDIVVGR+TEV  KRW
Subjt:  KIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIVVGRVTEVAPKRW

Query:  RLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDL
        +++ N   ++VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +
Subjt:  RLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDL

Query:  ILGCNGFIWI---GEHVD
        ILG NGFIWI    EH D
Subjt:  ILGCNGFIWI---GEHVD

Q9ZVT7 Exosome complex component RRP4 homolog4.4e-11765.66Show/hide
Query:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV
        MR LQ+ L+QTQK+R +RA+E L+S+SS ANSDASVI+ D+IP+N++D  LKGHGT +++GE++AT+CGVVERV+KL+YVR LRAR     YKPEVGDIV
Subjt:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV

Query:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQ
        VGRV EVA KRWR+++N++Q+ VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K 
Subjt:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQ

Query:  HFHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSI
        HFH++E  GIDLI+GCNGFIW+GEHV+  + M ++DQ  K E+  S    S G   +E+ + PLETRQ ICR  NAIRVLS LGF +++EVIMETV+LS 
Subjt:  HFHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSI

Query:  SLNIDVHEMLGSEFCVLTAEKEAGRRTSSKKR
        S NID+H+MLGSEF V+ AE EA RR + +K+
Subjt:  SLNIDVHEMLGSEFCVLTAEKEAGRRTSSKKR

Arabidopsis top hitse value%identityAlignment
AT1G03360.1 ribosomal RNA processing 43.1e-11865.66Show/hide
Query:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV
        MR LQ+ L+QTQK+R +RA+E L+S+SS ANSDASVI+ D+IP+N++D  LKGHGT +++GE++AT+CGVVERV+KL+YVR LRAR     YKPEVGDIV
Subjt:  MRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDIV

Query:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQ
        VGRV EVA KRWR+++N++Q+ VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K 
Subjt:  VGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQ

Query:  HFHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSI
        HFH++E  GIDLI+GCNGFIW+GEHV+  + M ++DQ  K E+  S    S G   +E+ + PLETRQ ICR  NAIRVLS LGF +++EVIMETV+LS 
Subjt:  HFHHLEQYGIDLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSI

Query:  SLNIDVHEMLGSEFCVLTAEKEAGRRTSSKKR
        S NID+H+MLGSEF V+ AE EA RR + +K+
Subjt:  SLNIDVHEMLGSEFCVLTAEKEAGRRTSSKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCAACCTTCAAATTTTCTAAATGCAGATATGAGAGGATTACAGATTTCCTTGAATCAAACTCAGAAGATTCGGCTTCAAAGAGCCCTAGAAACGCTCGAGTCTAT
CTCTTCAAAGGCCAATTCCGATGCTTCTGTTATAATTGCCGATACTATTCCTCTCAATTACGAGGATTTCGTCCTCAAGGGACACGGGACCCTTGACTTGAATGGAGAAG
TAGTTGCCACTATTTGTGGAGTGGTTGAGCGAGTCAATAAGCTTATCTATGTACGTGCCTTACGTGCCAGGTTGTCCATGACTTTATATAAACCGGAGGTTGGTGATATC
GTAGTGGGGCGTGTTACAGAGGTTGCTCCAAAACGTTGGAGGTTGGATATAAATTATAGCCAAAATGCTGTTTTGATGCTTTCTTCAATGAACTTGCCTGATGGTATTCA
GAGGAGGCGAACTGCAGTGGATGAACTCAACATGCGGAGCATTTTTGAAGAAAATGATGTTATTTGTGCAGAAGTTCGTGGTTTTCAACATGATGGCTTGCATCTTCAAG
CAAGAAGCCAGAAATATGGGAAGCTTGAAAGAGGTCAGCTGCTTACAGTGTCACCATATCTAGTAAAGAGACGCAAACAACACTTCCATCATTTGGAGCAGTATGGTATT
GATTTAATACTCGGATGTAATGGATTTATCTGGATTGGGGAGCATGTTGATCCCGCAGAGGATATGATGTTAGAAGATCAGGTTAATAAATCTGAACAAAAGGGTTCAAA
ATTTGAAGGAAGTTTGGGTAACCAAGTGCAAGAAAGAATATATACTCCATTAGAGACACGTCAGAATATATGCAGAACTGCAAATGCCATTCGAGTATTGTCTATCTTAG
GTTTCATCATGTCAGTAGAAGTCATAATGGAGACAGTTAGTTTAAGTATTTCTCTGAACATCGACGTGCATGAAATGCTTGGTTCGGAGTTCTGTGTTCTCACTGCGGAA
AAAGAGGCTGGACGGCGGACTTCAAGTAAGAAGAGGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCAACCTTCAAATTTTCTAAATGCAGATATGAGAGGATTACAGATTTCCTTGAATCAAACTCAGAAGATTCGGCTTCAAAGAGCCCTAGAAACGCTCGAGTCTAT
CTCTTCAAAGGCCAATTCCGATGCTTCTGTTATAATTGCCGATACTATTCCTCTCAATTACGAGGATTTCGTCCTCAAGGGACACGGGACCCTTGACTTGAATGGAGAAG
TAGTTGCCACTATTTGTGGAGTGGTTGAGCGAGTCAATAAGCTTATCTATGTACGTGCCTTACGTGCCAGGTTGTCCATGACTTTATATAAACCGGAGGTTGGTGATATC
GTAGTGGGGCGTGTTACAGAGGTTGCTCCAAAACGTTGGAGGTTGGATATAAATTATAGCCAAAATGCTGTTTTGATGCTTTCTTCAATGAACTTGCCTGATGGTATTCA
GAGGAGGCGAACTGCAGTGGATGAACTCAACATGCGGAGCATTTTTGAAGAAAATGATGTTATTTGTGCAGAAGTTCGTGGTTTTCAACATGATGGCTTGCATCTTCAAG
CAAGAAGCCAGAAATATGGGAAGCTTGAAAGAGGTCAGCTGCTTACAGTGTCACCATATCTAGTAAAGAGACGCAAACAACACTTCCATCATTTGGAGCAGTATGGTATT
GATTTAATACTCGGATGTAATGGATTTATCTGGATTGGGGAGCATGTTGATCCCGCAGAGGATATGATGTTAGAAGATCAGGTTAATAAATCTGAACAAAAGGGTTCAAA
ATTTGAAGGAAGTTTGGGTAACCAAGTGCAAGAAAGAATATATACTCCATTAGAGACACGTCAGAATATATGCAGAACTGCAAATGCCATTCGAGTATTGTCTATCTTAG
GTTTCATCATGTCAGTAGAAGTCATAATGGAGACAGTTAGTTTAAGTATTTCTCTGAACATCGACGTGCATGAAATGCTTGGTTCGGAGTTCTGTGTTCTCACTGCGGAA
AAAGAGGCTGGACGGCGGACTTCAAGTAAGAAGAGGGGATGA
Protein sequenceShow/hide protein sequence
MFQPSNFLNADMRGLQISLNQTQKIRLQRALETLESISSKANSDASVIIADTIPLNYEDFVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARLSMTLYKPEVGDI
VVGRVTEVAPKRWRLDINYSQNAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGI
DLILGCNGFIWIGEHVDPAEDMMLEDQVNKSEQKGSKFEGSLGNQVQERIYTPLETRQNICRTANAIRVLSILGFIMSVEVIMETVSLSISLNIDVHEMLGSEFCVLTAE
KEAGRRTSSKKRG