| GenBank top hits | e value | %identity | Alignment |
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| KAF8401625.1 hypothetical protein HHK36_012571 [Tetracentron sinense] | 1.1e-32 | 37.21 | Show/hide |
Query: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLNLIFESVEGMLVSLGRLLKLLDVSGCFFIKESFSYYIRKVTASTWE
LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHM ++ +G F + I V +
Subjt: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLNLIFESVEGMLVSLGRLLKLLDVSGCFFIKESFSYYIRKVTASTWE
Query: IRLKLASKLRHGVRCPSIIQPSLFRSFSLIGMLSFLHPKSSLFFYGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRF
LK +LI+ L + ++R M
Subjt: IRLKLASKLRHGVRCPSIIQPSLFRSFSLIGMLSFLHPKSSLFFYGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRF
Query: EELKEKLGGVVEDGVVYGSLIKVVKMSAVSCDGHGIHKNEFEVCRNLLCSQPLVYVCRGMGFLSVRNCFIRGSVVRYVQLPPDGVDIELLHDATRREARG
+EK G + + G G + ++A D G + L ++ + + +G LSVRNCFIRGSVVRYVQLPP+GVDIELLHDATRREARG
Subjt: EELKEKLGGVVEDGVVYGSLIKVVKMSAVSCDGHGIHKNEFEVCRNLLCSQPLVYVCRGMGFLSVRNCFIRGSVVRYVQLPPDGVDIELLHDATRREARG
Query: G
G
Subjt: G
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| KAG6576653.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] | 6.5e-28 | 84.62 | Show/hide |
Query: YGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
Y +LI GL D+NKLERAMELK EMT KGFVPDP+IYHYLMVG VRSSDPDGVFK FEELKEKLGG VEDGVVYGSL+K
Subjt: YGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
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| RVX20646.1 Sm-like protein LSM2 [Vitis vinifera] | 7.1e-35 | 40.62 | Show/hide |
Query: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLNLIFESVEGMLVSLG---RLLKLLDVSGCFFIKESFSYYIRKVTAS
LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHM ++ + +SLG R L +L +S C ++ S
Subjt: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLNLIFESVEGMLVSLG---RLLKLLDVSGCFFIKESFSYYIRKVTAS
Query: TWEIRLKLASKLRH-----GVRCPSIIQPSLFRSFSLIGMLSFLHPKSSLFFYGVLIIGLADDNK-------------LERAMELKVEMTLKGFVPDPII
W L+L K+ + G+ I R ++L+ FL+ +L+ D K LER M + L + +
Subjt: TWEIRLKLASKLRH-----GVRCPSIIQPSLFRSFSLIGMLSFLHPKSSLFFYGVLIIGLADDNK-------------LERAMELKVEMTLKGFVPDPII
Query: YHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIKVVKMSAVSCDGHGI--HKNEFEVCRNLLCSQPLVYVCRG-MGFLSVRNCFIRGSVVR
+V +S + + +E +E + + +G ++ KM +C I H++ EV +PL + LSVRNCFIRGSVVR
Subjt: YHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIKVVKMSAVSCDGHGI--HKNEFEVCRNLLCSQPLVYVCRG-MGFLSVRNCFIRGSVVR
Query: YVQLPPDGVDIELLHDATRREARGG
YVQLPP+GVDIELLHDATRREARGG
Subjt: YVQLPPDGVDIELLHDATRREARGG
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| XP_022922766.1 pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Cucurbita moschata] | 6.5e-28 | 84.62 | Show/hide |
Query: YGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
Y +LI GL D+NKLERAMELK EMT KGFVPDP+IYHYLMVG VRSSDPDGVFK FEELKEKLGG VEDGVVYGSL+K
Subjt: YGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
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| XP_023553006.1 pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like [Cucurbita pepo subsp. pepo] | 2.9e-28 | 84.62 | Show/hide |
Query: YGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
Y +LI GL D+NKLERAMELK EMT+KGFVPDP+IYHYLMVG VRSSDPDGVFK FEELKEKLGG VEDGVVYGSL+K
Subjt: YGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438KHH3 Sm-like protein LSM2 | 3.5e-35 | 40.62 | Show/hide |
Query: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLNLIFESVEGMLVSLG---RLLKLLDVSGCFFIKESFSYYIRKVTAS
LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHM ++ + +SLG R L +L +S C ++ S
Subjt: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLNLIFESVEGMLVSLG---RLLKLLDVSGCFFIKESFSYYIRKVTAS
Query: TWEIRLKLASKLRH-----GVRCPSIIQPSLFRSFSLIGMLSFLHPKSSLFFYGVLIIGLADDNK-------------LERAMELKVEMTLKGFVPDPII
W L+L K+ + G+ I R ++L+ FL+ +L+ D K LER M + L + +
Subjt: TWEIRLKLASKLRH-----GVRCPSIIQPSLFRSFSLIGMLSFLHPKSSLFFYGVLIIGLADDNK-------------LERAMELKVEMTLKGFVPDPII
Query: YHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIKVVKMSAVSCDGHGI--HKNEFEVCRNLLCSQPLVYVCRG-MGFLSVRNCFIRGSVVR
+V +S + + +E +E + + +G ++ KM +C I H++ EV +PL + LSVRNCFIRGSVVR
Subjt: YHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIKVVKMSAVSCDGHGI--HKNEFEVCRNLLCSQPLVYVCRG-MGFLSVRNCFIRGSVVR
Query: YVQLPPDGVDIELLHDATRREARGG
YVQLPP+GVDIELLHDATRREARGG
Subjt: YVQLPPDGVDIELLHDATRREARGG
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| A0A6J1CK90 pentatricopeptide repeat-containing protein At3g49240 | 2.7e-27 | 83.33 | Show/hide |
Query: YGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
Y +LI GL D+NKLERAMELK EMT+KGFVPDPIIYHYLMVG VR+SD DGVFK FEELKEKLGG VEDGVVYGSL+K
Subjt: YGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
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| A0A6J1E509 pentatricopeptide repeat-containing protein At3g49240, mitochondrial | 3.1e-28 | 84.62 | Show/hide |
Query: YGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
Y +LI GL D+NKLERAMELK EMT KGFVPDP+IYHYLMVG VRSSDPDGVFK FEELKEKLGG VEDGVVYGSL+K
Subjt: YGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
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| A0A6J1G012 pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like | 4.5e-27 | 82.05 | Show/hide |
Query: YGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
Y +LI GL D+NKLERAMELK EMT+KGFV DPIIYHYLMVG +++SDPDGVFK FEELKEKLGG VEDGVVYGSLIK
Subjt: YGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
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| A0A6J1JB23 pentatricopeptide repeat-containing protein At3g49240, mitochondrial | 2.7e-27 | 83.33 | Show/hide |
Query: YGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
Y +LI GL D+NKLERAMELK EMT+KGFVPDP+IY YLMVG VRSSDPDGVFK FEELKEKLGG VEDGVVYGSL+K
Subjt: YGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O35900 U6 snRNA-associated Sm-like protein LSm2 | 2.2e-15 | 62.12 | Show/hide |
Query: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLNLIFESVEGMLV
LF+S+FK LVG++V VELKNDL+I GTLHSVDQYLNIKL + V D +KYPHML++ + G +V
Subjt: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLNLIFESVEGMLV
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| O94408 U6 snRNA-associated Sm-like protein LSm2 | 4.2e-14 | 69.81 | Show/hide |
Query: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHM
LF+S+FK L+ EVTVELKND++IRG L SVDQ+LN+KLEN VVD KYPHM
Subjt: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHM
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| Q1H595 Sm-like protein LSM2 | 1.7e-23 | 78.08 | Show/hide |
Query: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLNLIFESVEGMLVSLGRLLK
LFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHML++ + G +V +L K
Subjt: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLNLIFESVEGMLVSLGRLLK
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| Q1H595 Sm-like protein LSM2 | 3.6e-13 | 89.74 | Show/hide |
Query: LSVRNCFIRGSVVRYVQLPPDGVDIELLHDATRREARGG
LSVRNCFIRGSVVRYVQLP DGVD++LLHDA RREARGG
Subjt: LSVRNCFIRGSVVRYVQLPPDGVDIELLHDATRREARGG
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| Q9M3A8 Pentatricopeptide repeat-containing protein At3g49240, mitochondrial | 1.4e-20 | 56.1 | Show/hide |
Query: SLFFYGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
S+ + +L+ GL ++ LE+AME+K +M +KGFV DP++Y YLM+G V++SD DGV K ++ELKEKLGG V+DGVVYG L+K
Subjt: SLFFYGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
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| Q9Y333 U6 snRNA-associated Sm-like protein LSm2 | 2.2e-15 | 62.12 | Show/hide |
Query: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLNLIFESVEGMLV
LF+S+FK LVG++V VELKNDL+I GTLHSVDQYLNIKL + V D +KYPHML++ + G +V
Subjt: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLNLIFESVEGMLV
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G03330.1 Small nuclear ribonucleoprotein family protein | 1.2e-24 | 78.08 | Show/hide |
Query: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLNLIFESVEGMLVSLGRLLK
LFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHML++ + G +V +L K
Subjt: LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLNLIFESVEGMLVSLGRLLK
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| AT1G03330.1 Small nuclear ribonucleoprotein family protein | 2.5e-14 | 89.74 | Show/hide |
Query: LSVRNCFIRGSVVRYVQLPPDGVDIELLHDATRREARGG
LSVRNCFIRGSVVRYVQLP DGVD++LLHDA RREARGG
Subjt: LSVRNCFIRGSVVRYVQLPPDGVDIELLHDATRREARGG
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| AT1G22960.1 Pentatricopeptide repeat (PPR) superfamily protein | 8.2e-05 | 35.37 | Show/hide |
Query: LHPKSSLFFYGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVY
+HP S+ Y LI GL + LE A LK EMT + PD I Y L+ G V++ + + ++E+ K G+ DG Y
Subjt: LHPKSSLFFYGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVY
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| AT3G16010.1 Pentatricopeptide repeat (PPR-like) superfamily protein | 8.2e-05 | 36.59 | Show/hide |
Query: SLFFYGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
S F Y +LI G N++E+A+ L EM KGF P P Y L+ ++ + + F+ELKE G V VY +IK
Subjt: SLFFYGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
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| AT3G49240.1 Pentatricopeptide repeat (PPR) superfamily protein | 9.6e-22 | 56.1 | Show/hide |
Query: SLFFYGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
S+ + +L+ GL ++ LE+AME+K +M +KGFV DP++Y YLM+G V++SD DGV K ++ELKEKLGG V+DGVVYG L+K
Subjt: SLFFYGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLIK
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| AT5G61990.1 Pentatricopeptide repeat (PPR) superfamily protein | 3.3e-06 | 33.33 | Show/hide |
Query: SLFFYGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLI
++ Y +L+ G ++E+A EL EM++KG P+ + Y ++ G +S D F+ F+E+ KL G+V D VY +L+
Subjt: SLFFYGVLIIGLADDNKLERAMELKVEMTLKGFVPDPIIYHYLMVGGVRSSDPDGVFKRFEELKEKLGGVVEDGVVYGSLI
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