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Spg038380 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038380
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPHD-type domain-containing protein
Genome locationscaffold1:56934929..56936525
RNA-Seq ExpressionSpg038380
SyntenySpg038380
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9585175.1 putative chromatin regulator PHD family [Lupinus albus]2.2e-0972.5Show/hide
Query:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
        DGFGDE G +GHLLGP  DR+GI R+WVH  C VWSPEVY
Subjt:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
KAF3665249.1 hypothetical protein FXO38_09699 [Capsicum annuum]3.8e-0972.5Show/hide
Query:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
        DGFGDE G +G LLGPI DR+GI  +WVH QC VWSPEVY
Subjt:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
THU63554.1 hypothetical protein C4D60_Mb01t17050 [Musa balbisiana]1.0e-0975Show/hide
Query:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
        DGFGDE G +G LLGPI DR GIPR+WVH  C VWSPEVY
Subjt:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
XP_009402652.1 PREDICTED: uncharacterized protein LOC103986378 [Musa acuminata subsp. malaccensis]1.0e-0975Show/hide
Query:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
        DGFGDE G +G LLGPI DR GIPR+WVH  C VWSPEVY
Subjt:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
XP_022156988.1 uncharacterized protein LOC111023817 [Momordica charantia]2.8e-1272.09Show/hide
Query:  ENDGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVYI
        +NDGFGDE+G +G LLGP  D N IPRLWVHYQC++WSPEVY+
Subjt:  ENDGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVYI
TrEMBL top hitse value%identityAlignment
A0A1U8HJ21 uncharacterized protein LOC107878633 isoform X11.9e-0972.5Show/hide
Query:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
        DGFGDE G +G LLGPI DR+GI  +WVH QC VWSPEVY
Subjt:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
A0A4S8JPV4 PHD-type domain-containing protein4.9e-1075Show/hide
Query:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
        DGFGDE G +G LLGPI DR GIPR+WVH  C VWSPEVY
Subjt:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
A0A6A4MZU2 Putative chromatin regulator PHD family1.1e-0972.5Show/hide
Query:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
        DGFGDE G +GHLLGP  DR+GI R+WVH  C VWSPEVY
Subjt:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
A0A6J1DS84 uncharacterized protein LOC1110238171.4e-1272.09Show/hide
Query:  ENDGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVYI
        +NDGFGDE+G +G LLGP  D N IPRLWVHYQC++WSPEVY+
Subjt:  ENDGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVYI
M0RZP5 PHD-type domain-containing protein4.9e-1075Show/hide
Query:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
        DGFGDE G +G LLGPI DR GIPR+WVH  C VWSPEVY
Subjt:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15120.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.0e-1167.5Show/hide
Query:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY
        DGFGD+ G +G LLGPI DR GI   WVH  C VWSPEVY
Subjt:  DGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATCATAAGCTTGAGAATGATGGATTTGGTGATGAAGAAGGATGTATAGGTCATCTTTTAGGCCCCATTCAGGATCGTAATGGCATCCCTCGGCTATGGGTCCA
TTATCAATGTGTTGTTTGGAGTCCAGAGGTATATATATACACTTTTTATTTTAGCATAACAAACAAAAGAGTGGAAATTTCAACATTCGACTTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGATCATAAGCTTGAGAATGATGGATTTGGTGATGAAGAAGGATGTATAGGTCATCTTTTAGGCCCCATTCAGGATCGTAATGGCATCCCTCGGCTATGGGTCCA
TTATCAATGTGTTGTTTGGAGTCCAGAGGTATATATATACACTTTTTATTTTAGCATAACAAACAAAAGAGTGGAAATTTCAACATTCGACTTCAAGTGA
Protein sequenceShow/hide protein sequence
MKDHKLENDGFGDEEGCIGHLLGPIQDRNGIPRLWVHYQCVVWSPEVYIYTFYFSITNKRVEISTFDFK