CuGenDBv2

Gene ID	Spg038413
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	importin-11
Genome location	scaffold12:2602426..2605477
RNA-Seq Expression	Spg038413
Synteny	Spg038413
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0031267 - small GTPase binding (molecular function)
InterPro domains	IPR001494 - Importin-beta, N-terminal domain IPR011989 - Armadillo-like helical IPR016024 - Armadillo-type fold

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6607016.1 Importin-11, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-63

95.52

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Query:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR
        MGMSSSDMAAMYTLLMNSMSGD GVRKQAELALS TDSRSGFCSCLLELITSPDLVSQ DIRLMASVYLKNSINRYWRTSSRR+IPDTCG+ NDEKVHIR
Subjt:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR

Query:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
        KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
Subjt:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW

XP_022948499.1 importin-11 [Cucurbita moschata]

6.8e-64

96.27

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Query:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR
        MGMSSSDMAAMYTLLMNSMSGD GVRKQAELALS TDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRR+IPDTCG+ NDEKVHIR
Subjt:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR

Query:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
        KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
Subjt:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW

XP_022998015.1 importin-11 [Cucurbita maxima]

2.0e-63

95.52

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Query:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR
        MGMSSSDMAAMYTLL+NSMSGD GVRKQAELALS TDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRR+IPDTCG+ NDEKVHIR
Subjt:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR

Query:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
        KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
Subjt:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW

XP_023524707.1 importin-11 [Cucurbita pepo subsp. pepo]

6.8e-64

96.27

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Query:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR
        MGMSSSDMAAMYTLLMNSMSGD GVRKQAELALS TDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRR+IPDTCG+ NDEKVHIR
Subjt:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR

Query:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
        KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
Subjt:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW

XP_038883899.1 importin-11 [Benincasa hispida]

1.9e-61

93.28

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Query:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR
        MGMSSSDMAAMYTLLMNSMSGDEGVRKQAE ALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINR+WR +SRR IP+ CGISNDEK HIR
Subjt:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR

Query:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
        KKLLSHLREPDYKIAAILAVIISK+ARIDYPREW
Subjt:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C5V8 importin-11

4.5e-61

91.04

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Query:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR
        MGMSSSDMAAMYTLLMNSMSGDEGVRKQAE ALS+TDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWR+++RR IP+ CGI+NDEK HIR
Subjt:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR

Query:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
        KKLLSHLREPDYKIAAILAVIISK+ARIDYP+EW
Subjt:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW

A0A5D3BRZ8 Importin-11

4.5e-61

91.04

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Query:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR
        MGMSSSDMAAMYTLLMNSMSGDEGVRKQAE ALS+TDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWR+++RR IP+ CGI+NDEK HIR
Subjt:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR

Query:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
        KKLLSHLREPDYKIAAILAVIISK+ARIDYP+EW
Subjt:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW

A0A6J1CNW0 importin-11

4.5e-61

92.54

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Query:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR
        MGMSSSDMAAMYTLLMNSMSGDEGVRKQAE ALS+TDSRSGFCSCLLELITSPDL S+ADIRLMASVYLKNSINRYWR+SSRR+IPD  GISN+EK HIR
Subjt:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR

Query:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
        KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
Subjt:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW

A0A6J1GA09 importin-11

3.3e-64

96.27

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Query:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR
        MGMSSSDMAAMYTLLMNSMSGD GVRKQAELALS TDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRR+IPDTCG+ NDEKVHIR
Subjt:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR

Query:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
        KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
Subjt:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW

A0A6J1K935 importin-11

9.6e-64

95.52

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Query:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR
        MGMSSSDMAAMYTLL+NSMSGD GVRKQAELALS TDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRR+IPDTCG+ NDEKVHIR
Subjt:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR

Query:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
        KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
Subjt:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW

SwissProt top hits

e value

%identity

Alignment

Q02932 Importin beta-like protein KAP120

2.7e-07

31.82

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Query:  VRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIRKKLLSHLREPDYKIAAILAVIISK
        V+K AE  L   ++++GF   L  +    +L +   IR +A +  KN +++YWR++   AIP       DEK  IR +L   + E + ++    A   ++
Subjt:  VRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIRKKLLSHLREPDYKIAAILAVIISK

Query:  IARIDYPREW
        IAR+D+P EW
Subjt:  IARIDYPREW

Q8K2V6 Importin-11

9.7e-13

34.62

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Query:  SSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIRKKLL
        +S  + +  +L  + S D  V K AE  L   +++ GF S LL + T+  L    ++R +A +Y K+ I+RYWR  +  A      +S +EK  +R  L+
Subjt:  SSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIRKKLL

Query:  SHLREPDYKIAAILAVIISKIARIDYPREW
        ++  EP  +IA  +AV+I+K+AR+D PR+W
Subjt:  SHLREPDYKIAAILAVIISKIARIDYPREW

Q9UI26 Importin-11

7.4e-13

34.62

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Query:  SSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIRKKLL
        +S    +  +L  + S D  V K AE  L   +++ GF S LL + T+  L    ++R +A +Y K+ I+RYWR  +  A      +S +EK  +R  L+
Subjt:  SSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIRKKLL

Query:  SHLREPDYKIAAILAVIISKIARIDYPREW
        ++  EP  +IA  +AV+I+K+AR+D PR+W
Subjt:  SHLREPDYKIAAILAVIISKIARIDYPREW

Arabidopsis top hits

e value

%identity

Alignment

AT3G08960.1 ARM repeat superfamily protein

1.2e-42

66.42

Show/hide

Query:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR
        M +S+SD+ AMYTLL NSMSGDE VR+ AE ALS ++SR GFCSCL+E+I S DLVS  D+RLMASVY KNSINR+W+  SRR   ++  +SN+EK H+R
Subjt:  MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIR

Query:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW
        +KLLSHLRE +Y+IA +LAV+ISKIAR DYPREW
Subjt:  KKLLSHLREPDYKIAAILAVIISKIARIDYPREW

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGAATGTCAAGCTCAGATATGGCGGCGATGTACACGCTGCTTATGAATTCAATGAGTGGCGATGAGGGTGTTCGTAAACAGGCTGAGTTGGCGCTATCTGACACTGA
TAGTCGGTCTGGGTTTTGCTCTTGTCTATTGGAGCTGATCACTTCGCCGGATTTAGTTTCTCAAGCAGATATTCGTCTTATGGCGTCCGTTTATTTGAAGAACAGTATTA
ATCGTTATTGGAGGACTAGTAGTAGACGTGCAATCCCGGATACTTGTGGGATTAGCAATGATGAGAAGGTTCATATCAGGAAAAAGCTCTTGTCCCACTTGAGAGAACCA
GATTATAAGATAGCAGCAATTTTGGCAGTCATCATATCTAAAATCGCCCGCATTGATTATCCCAGGGAATGGAAAGGAAGACAAGGTAATAGTGTTCTAGGGGAAGAAGG
AGCTCAGAAATCGGCCTTATTTGTTGTTAAGGACTCCTTTCCGTTTGTGCGGAGTTACTCTGCTCTAGAAATTCTTGCTTTGGCCCCAAAGAAGAGACCACGTAGCACAT
CTCCGAAGGACTTTCCCCTTCCTGCTAAACATCCACCTGCTAGAGTAATTGTGAGTAAATACGACGCTCATCCTTTCGAGTGGTTGTTGGGTGGGGTTAGAGGTACTTCC
AGAAATCCTTGGAAAGATATTGTCATGGAGCTCTCCTCTTTCTCTAGCCTTGTTCATTGTGTGGTGGGGGACAGGAAATACACATTCTTTTGCGAGGATAAGTGGGTGGG
GGATAGATCCCTCTACTTGAAGTTCCCCAATATATACCTTCTTTCGTCCATGAGAAACCGTTCGGTTGCCGATGTCTTGATTCATTCAGGGAGCTCCCCTTCGTTGTTGT
TTGGGTTCTGTTGCACTTTGTTTGATAGGGAAGCGATGGATGTCACGACTCTTCTTTCTTTGATTGAGGAGTTTAAGTTGAGGTTGAGGAGGAGAGATAGTCGTTGTTAG

mRNA sequence

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Protein sequence

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MGMSSSDMAAMYTLLMNSMSGDEGVRKQAELALSDTDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRTSSRRAIPDTCGISNDEKVHIRKKLLSHLREP
DYKIAAILAVIISKIARIDYPREWKGRQGNSVLGEEGAQKSALFVVKDSFPFVRSYSALEILALAPKKRPRSTSPKDFPLPAKHPPARVIVSKYDAHPFEWLLGGVRGTS
RNPWKDIVMELSSFSSLVHCVVGDRKYTFFCEDKWVGDRSLYLKFPNIYLLSSMRNRSVADVLIHSGSSPSLLFGFCCTLFDREAMDVTTLLSLIEEFKLRLRRRDSRC

Spg038413 (gene) of Sponge gourd (cylindrica) v1 genome