CuGenDBv2

Gene ID	Spg038426
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Kinesin light chain 3 isoform X1
Genome location	scaffold12:3271836..3279266
RNA-Seq Expression	Spg038426
Synteny	Spg038426
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR026960 - Reverse transcriptase zinc-binding domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0047377.1 kinesin light chain 3 isoform X1 [Cucumis melo var. makuwa]

2.3e-25

65.71

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Query:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP
        +HMKSN+LL+AENVQRKILHIMELSK                               GWNSLETINSADGLASTLYANGCLKEAQ+LLERCLDARK+LLP
Subjt:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP

Query:  EDHIQ
        EDHIQ
Subjt:  EDHIQ

TYK14053.1 kinesin light chain 3 [Cucumis melo var. makuwa]

2.3e-25

65.71

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Query:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP
        +HMKSN+LL+AENVQRKILHIMELSK                               GWNSLETINSADGLASTLYANGCLKEAQ+LLERCLDARK+LLP
Subjt:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP

Query:  EDHIQ
        EDHIQ
Subjt:  EDHIQ

XP_008457118.2 PREDICTED: uncharacterized protein LOC103496867 [Cucumis melo]

2.3e-25

65.71

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Query:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP
        +HMKSN+LL+AENVQRKILHIMELSK                               GWNSLETINSADGLASTLYANGCLKEAQ+LLERCLDARK+LLP
Subjt:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP

Query:  EDHIQ
        EDHIQ
Subjt:  EDHIQ

XP_022143432.1 kinesin light chain 1 isoform X1 [Momordica charantia]

1.7e-25

64.22

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Query:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP
        IH+KSNHLL+AENVQRKILHIMELSK                               GWNSL+TINSADGLASTLYANGCLKEAQ+LLERCLDARKT+LP
Subjt:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP

Query:  EDHIQEVGA
        E HIQ +GA
Subjt:  EDHIQEVGA

XP_022143434.1 kinesin light chain 1 isoform X3 [Momordica charantia]

1.7e-25

64.22

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Query:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP
        IH+KSNHLL+AENVQRKILHIMELSK                               GWNSL+TINSADGLASTLYANGCLKEAQ+LLERCLDARKT+LP
Subjt:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP

Query:  EDHIQEVGA
        E HIQ +GA
Subjt:  EDHIQEVGA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C5G7 uncharacterized protein LOC103496867

1.1e-25

65.71

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Query:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP
        +HMKSN+LL+AENVQRKILHIMELSK                               GWNSLETINSADGLASTLYANGCLKEAQ+LLERCLDARK+LLP
Subjt:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP

Query:  EDHIQ
        EDHIQ
Subjt:  EDHIQ

A0A5A7TZJ1 Kinesin light chain 3 isoform X1

1.1e-25

65.71

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Query:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP
        +HMKSN+LL+AENVQRKILHIMELSK                               GWNSLETINSADGLASTLYANGCLKEAQ+LLERCLDARK+LLP
Subjt:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP

Query:  EDHIQ
        EDHIQ
Subjt:  EDHIQ

A0A5D3CQC2 Kinesin light chain 3

1.1e-25

65.71

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Query:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP
        +HMKSN+LL+AENVQRKILHIMELSK                               GWNSLETINSADGLASTLYANGCLKEAQ+LLERCLDARK+LLP
Subjt:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP

Query:  EDHIQ
        EDHIQ
Subjt:  EDHIQ

A0A6J1CPA5 kinesin light chain 1 isoform X3

8.4e-26

64.22

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Query:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP
        IH+KSNHLL+AENVQRKILHIMELSK                               GWNSL+TINSADGLASTLYANGCLKEAQ+LLERCLDARKT+LP
Subjt:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP

Query:  EDHIQEVGA
        E HIQ +GA
Subjt:  EDHIQEVGA

A0A6J1CQT4 kinesin light chain 1 isoform X1

8.4e-26

64.22

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Query:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP
        IH+KSNHLL+AENVQRKILHIMELSK                               GWNSL+TINSADGLASTLYANGCLKEAQ+LLERCLDARKT+LP
Subjt:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP

Query:  EDHIQEVGA
        E HIQ +GA
Subjt:  EDHIQEVGA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G37590.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.5e-14

42.86

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Query:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP
        I+++SN L +AE +QRK+LH+MELSK                               GWNS+E I +A+ LA TL  +G L EA +L E+CL+ARK LLP
Subjt:  IHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLWLVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLP

Query:  EDHIQ
        E HIQ
Subjt:  EDHIQ

Sequences

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CDS sequence

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ATGCCCAAAAAGGTCAAGTTTTTTATGTGGGAGCTCAGTCATGCTTGCATAAACACTGCTGATGTTGTCCAACGGAAAATGCCTATGATATCCTTATCCCCAAATTGCTG
CTGCCTTTGCTTAAAAGCTCCAGAAACACAAATTCACCTATTCAGCTGGTGTCCATATATACACATGAAGTCTAATCATCTTTTGAAGGCTGAGAATGTACAAAGAAAAA
TTTTGCACATTATGGAATTATCAAAGGTGATGGGTTTCCAAGACCACAAGGAGATGATTGAGGTGTTCCTCCTCCATCCATTGTGTCTCGGTAAGGGGAGGTTTTTATGG
CTTGTTGGGGGATGGAATTCTCTGGAAACTATAAATTCTGCTGATGGCCTGGCCTCAACATTATATGCCAATGGATGCCTGAAGGAAGCACAAGATCTTCTTGAAAGGTG
TCTTGATGCACGGAAAACTTTACTTCCTGAGGACCACATCCAGGAGGTAGGGGCGTTCAAGAAAACTGAGAAACCCGAACAACCCAACCCGAATAACAAGGGTTTGGTTG
GGTTAGGTAAACTTTCAGTTTGGGTTGAGTTGAAAATTTTAAGAACCGATATGTTCGGTTCATAG

mRNA sequence

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Protein sequence

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MPKKVKFFMWELSHACINTADVVQRKMPMISLSPNCCCLCLKAPETQIHLFSWCPYIHMKSNHLLKAENVQRKILHIMELSKVMGFQDHKEMIEVFLLHPLCLGKGRFLW
LVGGWNSLETINSADGLASTLYANGCLKEAQDLLERCLDARKTLLPEDHIQEVGAFKKTEKPEQPNPNNKGLVGLGKLSVWVELKILRTDMFGS

Spg038426 (gene) of Sponge gourd (cylindrica) v1 genome