; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038438 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038438
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationscaffold12:1048712..1070804
RNA-Seq ExpressionSpg038438
SyntenySpg038438
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR025525 - hAT-like transposase, RNase-H fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN61798.1 hypothetical protein VITISV_044291 [Vitis vinifera]8.6e-0536.73Show/hide
Query:  DPNQSEDIKYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNMENE-ASCKSMDQPSVRDSGGEDD
        D  Q+   KY+ +  + +R+N LLY+ +VLDPRYKLKFV F     Y+ E + ++  ++ D+ R LY+EY      NE    +   QP   + G +DD
Subjt:  DPNQSEDIKYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNMENE-ASCKSMDQPSVRDSGGEDD

KAA0042176.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]7.3e-0439.02Show/hide
Query:  KYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSHYEAERSDEIRKKIEDM-TRSLYNEYETSNMENEASCKSMDQPSVR
        K+E +  +NER N LLY+ IVLDPR KL+FVSF L ++      E    +E+   R L++EY T+   +   C S    S +
Subjt:  KYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSHYEAERSDEIRKKIEDM-TRSLYNEYETSNMENEASCKSMDQPSVR

KAA0057700.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.5e-0436.73Show/hide
Query:  KYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSL-SHYEAERSDEIRKKIEDMTRSLYNEYETSNMENEASCKSMDQPSVRDSGGEDDDLVAQSSSS
        K+E +L +NE+ N LLY+ IVLDPR KLKFVSF L + +  E ++ +   +E   R L++EY T+   +   C S    S +   G D ++   S+ +
Subjt:  KYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSL-SHYEAERSDEIRKKIEDMTRSLYNEYETSNMENEASCKSMDQPSVRDSGGEDDDLVAQSSSS

KZV38952.1 hypothetical protein F511_41435 [Dorcoceras hygrometricum]5.6e-0442.17Show/hide
Query:  SNKDPNQSE-----DIKYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNM
        + KDP  S      + K+  +  D E+ N LL++ IVLDPRYKLKF  + LSH YE E  DE+ + ++   R LY+EY  S++
Subjt:  SNKDPNQSE-----DIKYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNM

TYK28895.1 putative transposase [Cucumis melo var. makuwa]7.3e-0434.69Show/hide
Query:  KYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNMENEASCKSMDQPSVRDSGGEDDDLVAQSSSS
        K+E +  +NE+ N LLY+ IVLDPR KL+FVSF L + +  E ++ +   +E   R L++EY T+   +   C S    S +   G D ++   S+ +
Subjt:  KYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNMENEASCKSMDQPSVRDSGGEDDDLVAQSSSS

TrEMBL top hitse value%identityAlignment
A0A2Z7BWC4 DUF4413 domain-containing protein2.7e-0442.17Show/hide
Query:  SNKDPNQSE-----DIKYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNM
        + KDP  S      + K+  +  D E+ N LL++ IVLDPRYKLKF  + LSH YE E  DE+ + ++   R LY+EY  S++
Subjt:  SNKDPNQSE-----DIKYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNM

A0A5A7SX87 Thiamine biosynthetic bifunctional enzyme TH12.7e-0433.67Show/hide
Query:  KYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNMENEASCKSMDQPSVRDSGGEDDDLVAQSSSS
        K+E + E+NE+ N LLY+ I+LDPR KL+FVSF L + +  E ++ +   +E   R L++EY T+   +   C +    S +   G D ++   S+ +
Subjt:  KYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNMENEASCKSMDQPSVRDSGGEDDDLVAQSSSS

A0A5A7UFZ0 Zinc finger BED domain-containing protein RICESLEEPER 3-like3.5e-0434.69Show/hide
Query:  KYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNMENEASCKSMDQPSVRDSGGEDDDLVAQSSSS
        K+E +  +NE+ N LLY+ IVLDPR KL+FVSF L + +  E ++ +   +E   R L++EY T+   +   C S    S +   G D ++   S+ +
Subjt:  KYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNMENEASCKSMDQPSVRDSGGEDDDLVAQSSSS

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like3.5e-0434.69Show/hide
Query:  KYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNMENEASCKSMDQPSVRDSGGEDDDLVAQSSSS
        K+E +  +NE+ N LLY+ IVLDPR KL+FVSF L + +  E ++ +   +E   R L++EY T+   +   C S    S +   G D ++   S+ +
Subjt:  KYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNMENEASCKSMDQPSVRDSGGEDDDLVAQSSSS

A5BUV6 BED-type domain-containing protein4.2e-0536.73Show/hide
Query:  DPNQSEDIKYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNMENE-ASCKSMDQPSVRDSGGEDD
        D  Q+   KY+ +  + +R+N LLY+ +VLDPRYKLKFV F     Y+ E + ++  ++ D+ R LY+EY      NE    +   QP   + G +DD
Subjt:  DPNQSEDIKYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSH-YEAERSDEIRKKIEDMTRSLYNEYETSNMENE-ASCKSMDQPSVRDSGGEDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGCCTCGGCCCAATACCGAGGCCGACCCAGGCCAAGGTTCCGAGGGCTTCCCTGGTGGTGACTTTGAGCCCGGCAGCAGTGGAAACCCTAAGGGGAGCCTATAA
AAGGAAAGACCACACGCATGATTCAGAAAACCATTCTCCAGAATCGGGGATGCGGGGCGGGGATGGCAGCCGACGGCCCCGCCCCGCCACGTTCCTGTTTGAAATTGGGT
TAACTCTATTTAACTTGCCCAGTATGGATCCTAGCAAAACTGGGGAGGACCCTAACATTGCAAAGAAATGTGAGTCAAATCCATCAAGTCCGATGAGGGAAAACAAGCGT
ATTAAAACTTCTGGGGCTCAGGATCATTTTAATGAAGTTGATATTGGGGATTCTGATTGTCCAAAGCCAACAGGTAAGTGTAATGTCATTGTAAATGCATGCGATGACGA
ACAAAAGAAAAACACCACCAAAGTAGAGCAGATAGTACTTAACTGTGAAAAGGATCCAAGTAGAACGTGTGGCTCGAAGCAAAAGGGGTTGATGGATTGTCAGTCAGAGG
CTTGGCTTGGGTCTGAGACTCTGAACCGAACTATGCACGATCCTAATGGTAGTAAGTTTGCTTCTGAGTTTCTGTCTAAAACTGTGATAGTGCCAGATTTTTGTGCTGAT
ATTCAGCTTATTTTTGTTTTCTTAATATGGTTTCCTTGGGTCAAGTTCCTGTTTGAAACTGGGCTGATTCTGCTTCGCTTGTTTGGCTTGCCAAGCATGGATCTTAGCCA
TGGTGGGGAGCAGGATTCTAACATAGGAAAGAAACATGACTCTAATCCATCAAATCCAATAAGAAAGAACAAGCGAAGCAAGATTGAAGTTGATAGAGGGAATTTGGATA
CTGGTGATGGTGGGGACTCTGATGAATCTGATGCAAGAAAGAACAGCACCACCAATATGAAGCAAATGGAACTTAACTGCAAAAAGGATCCCAATCACCGCTCAATCTTC
TTCTTTCTCTCTAACTTCATCTTCCAACTTCGACGCCGGCCGCCGCATTTCTCTCTCCCGGCGTCGGCCCTCGCCGCTCGGACCTCCGCAGTCGCCTTCCGTCGTCGGCG
CCTCCGTGAGAATCTATTCCTTTCGCTCTCATCAACTCGGTTTGGCTTGCCAAGTATGGATCCTTGCCATACTAAGGAGGAGGATTCTAACATTGGAAAGAAACGTGAGT
CTGATGACTCTGATCCATCAAATCCAACAAGAATGAACAAGAGAAGTAAGGCTGAAGTAGATAGAGAGAATTCTGATACTGATAGTGGAGATTCTGATAGTGTTAGGTGT
TCTGATGAATCTGATGCACGAGAAAACAACACCACCAAGATGAACCAAATGGAACTTGACTCCAACAAGGATCCTAATCAATCAGAGGATATCAAGTACGAAACATTTTT
GGAGGACAATGAAAGGACTAATTTTCTCTTGTATATTCCCATTGTACTCGACCCTCGATACAAGCTAAAATTTGTATCGTTCTCCCTCTCACATTATGAGGCAGAAAGGT
CAGATGAAATTAGAAAGAAAATCGAGGATATGACAAGAAGTTTATATAATGAATACGAAACTTCAAACATGGAGAATGAGGCTTCATGTAAATCTATGGATCAACCATCA
GTGAGGGATTCAGGAGGAGAAGATGATGATCTGGTCGCTCAATCTTCTTCTTCCTCTCTAACTTTTCATTCTTCCGACTTTGCCGCCGGCCGGATCTCTGCACATTCGCC
TTCCGTTCCCTCTTCGTCGCCGCCGTCGGACTCTGTTTTTCTCGCTCTCATTAGCTCGACAGATTTATCTTCCCAAAGCATGGATTCTCCCCATACTGGGGAAGAGGATT
CTAACATTGCCAAGAAATGTGAGTCAAATCCATCAACTCCACCAAGAAAAAAGAACAAACAAAGTATGTCTTCTATGGCTTTCAATCATTTCAATGAAGTTGAAAATGAG
GATTCTGATTCTGATTCTGATTCTGAGTATAGAATGGAAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGCCTCGGCCCAATACCGAGGCCGACCCAGGCCAAGGTTCCGAGGGCTTCCCTGGTGGTGACTTTGAGCCCGGCAGCAGTGGAAACCCTAAGGGGAGCCTATAA
AAGGAAAGACCACACGCATGATTCAGAAAACCATTCTCCAGAATCGGGGATGCGGGGCGGGGATGGCAGCCGACGGCCCCGCCCCGCCACGTTCCTGTTTGAAATTGGGT
TAACTCTATTTAACTTGCCCAGTATGGATCCTAGCAAAACTGGGGAGGACCCTAACATTGCAAAGAAATGTGAGTCAAATCCATCAAGTCCGATGAGGGAAAACAAGCGT
ATTAAAACTTCTGGGGCTCAGGATCATTTTAATGAAGTTGATATTGGGGATTCTGATTGTCCAAAGCCAACAGGTAAGTGTAATGTCATTGTAAATGCATGCGATGACGA
ACAAAAGAAAAACACCACCAAAGTAGAGCAGATAGTACTTAACTGTGAAAAGGATCCAAGTAGAACGTGTGGCTCGAAGCAAAAGGGGTTGATGGATTGTCAGTCAGAGG
CTTGGCTTGGGTCTGAGACTCTGAACCGAACTATGCACGATCCTAATGGTAGTAAGTTTGCTTCTGAGTTTCTGTCTAAAACTGTGATAGTGCCAGATTTTTGTGCTGAT
ATTCAGCTTATTTTTGTTTTCTTAATATGGTTTCCTTGGGTCAAGTTCCTGTTTGAAACTGGGCTGATTCTGCTTCGCTTGTTTGGCTTGCCAAGCATGGATCTTAGCCA
TGGTGGGGAGCAGGATTCTAACATAGGAAAGAAACATGACTCTAATCCATCAAATCCAATAAGAAAGAACAAGCGAAGCAAGATTGAAGTTGATAGAGGGAATTTGGATA
CTGGTGATGGTGGGGACTCTGATGAATCTGATGCAAGAAAGAACAGCACCACCAATATGAAGCAAATGGAACTTAACTGCAAAAAGGATCCCAATCACCGCTCAATCTTC
TTCTTTCTCTCTAACTTCATCTTCCAACTTCGACGCCGGCCGCCGCATTTCTCTCTCCCGGCGTCGGCCCTCGCCGCTCGGACCTCCGCAGTCGCCTTCCGTCGTCGGCG
CCTCCGTGAGAATCTATTCCTTTCGCTCTCATCAACTCGGTTTGGCTTGCCAAGTATGGATCCTTGCCATACTAAGGAGGAGGATTCTAACATTGGAAAGAAACGTGAGT
CTGATGACTCTGATCCATCAAATCCAACAAGAATGAACAAGAGAAGTAAGGCTGAAGTAGATAGAGAGAATTCTGATACTGATAGTGGAGATTCTGATAGTGTTAGGTGT
TCTGATGAATCTGATGCACGAGAAAACAACACCACCAAGATGAACCAAATGGAACTTGACTCCAACAAGGATCCTAATCAATCAGAGGATATCAAGTACGAAACATTTTT
GGAGGACAATGAAAGGACTAATTTTCTCTTGTATATTCCCATTGTACTCGACCCTCGATACAAGCTAAAATTTGTATCGTTCTCCCTCTCACATTATGAGGCAGAAAGGT
CAGATGAAATTAGAAAGAAAATCGAGGATATGACAAGAAGTTTATATAATGAATACGAAACTTCAAACATGGAGAATGAGGCTTCATGTAAATCTATGGATCAACCATCA
GTGAGGGATTCAGGAGGAGAAGATGATGATCTGGTCGCTCAATCTTCTTCTTCCTCTCTAACTTTTCATTCTTCCGACTTTGCCGCCGGCCGGATCTCTGCACATTCGCC
TTCCGTTCCCTCTTCGTCGCCGCCGTCGGACTCTGTTTTTCTCGCTCTCATTAGCTCGACAGATTTATCTTCCCAAAGCATGGATTCTCCCCATACTGGGGAAGAGGATT
CTAACATTGCCAAGAAATGTGAGTCAAATCCATCAACTCCACCAAGAAAAAAGAACAAACAAAGTATGTCTTCTATGGCTTTCAATCATTTCAATGAAGTTGAAAATGAG
GATTCTGATTCTGATTCTGATTCTGAGTATAGAATGGAAACATGA
Protein sequenceShow/hide protein sequence
MVGLGPIPRPTQAKVPRASLVVTLSPAAVETLRGAYKRKDHTHDSENHSPESGMRGGDGSRRPRPATFLFEIGLTLFNLPSMDPSKTGEDPNIAKKCESNPSSPMRENKR
IKTSGAQDHFNEVDIGDSDCPKPTGKCNVIVNACDDEQKKNTTKVEQIVLNCEKDPSRTCGSKQKGLMDCQSEAWLGSETLNRTMHDPNGSKFASEFLSKTVIVPDFCAD
IQLIFVFLIWFPWVKFLFETGLILLRLFGLPSMDLSHGGEQDSNIGKKHDSNPSNPIRKNKRSKIEVDRGNLDTGDGGDSDESDARKNSTTNMKQMELNCKKDPNHRSIF
FFLSNFIFQLRRRPPHFSLPASALAARTSAVAFRRRRLRENLFLSLSSTRFGLPSMDPCHTKEEDSNIGKKRESDDSDPSNPTRMNKRSKAEVDRENSDTDSGDSDSVRC
SDESDARENNTTKMNQMELDSNKDPNQSEDIKYETFLEDNERTNFLLYIPIVLDPRYKLKFVSFSLSHYEAERSDEIRKKIEDMTRSLYNEYETSNMENEASCKSMDQPS
VRDSGGEDDDLVAQSSSSSLTFHSSDFAAGRISAHSPSVPSSSPPSDSVFLALISSTDLSSQSMDSPHTGEEDSNIAKKCESNPSTPPRKKNKQSMSSMAFNHFNEVENE
DSDSDSDSEYRMET