CuGenDBv2

Gene ID	Spg038442
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	UBA domain-containing protein
Genome location	scaffold12:1323009..1325651
RNA-Seq Expression	Spg038442
Synteny	Spg038442
Gene Ontology terms	GO:0043162 - ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (biological process) GO:0000813 - ESCRT I complex (cellular component) GO:0043130 - ubiquitin binding (molecular function)
InterPro domains	IPR009060 - UBA-like superfamily IPR015940 - Ubiquitin-associated domain IPR038870 - Ubiquitin-associated protein 1 IPR042575 - Ubiquitin-associated protein 1, C-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6605766.1 Ubiquitin-conjugating enzyme E2 10, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-110

91.07

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Query:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP +Y+AHPPMYGP ASSSPSPS+HPMY QSMYPRIGQQ HSPAPPVAR+SSHHHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+
Subjt:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GDIPRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLGG
        NKVVEALLMYDNDTDKAVAHFLGG
Subjt:  NKVVEALLMYDNDTDKAVAHFLGG

KAG7035731.1 hypothetical protein SDJN02_02529 [Cucurbita argyrosperma subsp. argyrosperma]

2.3e-111

91.15

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Query:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP +Y+AHPPMYGP ASSSPSPS+HPMY QSMYPRIGQQ HSPAPPVAR+SSHHHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+
Subjt:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GDIPRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLGGTS
        NKVVEALLMYDNDTDKAVAHFLGGTS
Subjt:  NKVVEALLMYDNDTDKAVAHFLGGTS

XP_022958203.1 uncharacterized protein LOC111459499 [Cucurbita moschata]

2.3e-111

91.15

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Query:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP +Y+AHPPMYGP ASSSPSPS+HPMY QSMYPRIGQQ HSPAPPVAR+SSHHHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+
Subjt:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GDIPRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLGGTS
        NKVVEALLMYDNDTDKAVAHFLGGTS
Subjt:  NKVVEALLMYDNDTDKAVAHFLGGTS

XP_022995350.1 velvet complex subunit B [Cucurbita maxima]

1.9e-110

90.27

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Query:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP +Y+AHPPMYGP ASSSPSPS+HPMY QSMYPRIGQQ HSPAPPV R+SSHHHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+
Subjt:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GDIPRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVV+KYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLGGTS
        NKVVEALLMYDNDTDKAVAHFLGGTS
Subjt:  NKVVEALLMYDNDTDKAVAHFLGGTS

XP_023534738.1 uncharacterized protein LOC111796216 [Cucurbita pepo subsp. pepo]

5.1e-111

90.71

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Query:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP +Y+AHPPMYGP ASSSPSPS+HPMY QSMYPRIGQQ HSPAPPVAR+SSHHHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+
Subjt:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GDIPRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVV+KYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLGGTS
        NKVVEALLMYDNDTDKAVAHFLGGTS
Subjt:  NKVVEALLMYDNDTDKAVAHFLGGTS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KNB8 Uncharacterized protein

3.7e-107

89.73

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Query:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGD
        MAYD+RN   HYD+H PMY  TASSSPSPS HPMY+ SMYPRIGQQA S  PPVARLSSHH+SSSPSPSP SSSGLGIRVTIKPEY IT PPQLSPQ+GD
Subjt:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGD

Query:  IPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSNK
        IPRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPP KPVESTSSMGSIGDPVVSKYVASGL+REAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS K
Subjt:  IPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSNK

Query:  VVEALLMYDNDTDKAVAHFLGGTS
        VVEALLMYDNDTDKAVAHFLGGTS
Subjt:  VVEALLMYDNDTDKAVAHFLGGTS

A0A1S3AUG0 uncharacterized protein LOC103482940 isoform X1

3.2e-103

87.95

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Query:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGD
        MAYD+RN   HYD+H PMY  TASS+PSPS HPMY+QSMYPRIGQQA S  PPVARLSSHHHSSSPS SP SSSGLGIRVTIKPEY IT PPQLSPQ+GD
Subjt:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGD

Query:  IPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSNK
        IPRSNF FDFEFEKKVLAEAEKE PNWNRFGLE  P KPVESTSSMGSIGDP VSKYVASGL+REAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS K
Subjt:  IPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSNK

Query:  VVEALLMYDNDTDKAVAHFLGGTS
        VVEALLMYDNDTDKAVAHFLGGTS
Subjt:  VVEALLMYDNDTDKAVAHFLGGTS

A0A6J1DVL2 uncharacterized protein LOC111023918 isoform X2

9.3e-103

85.4

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Query:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSM--YPRIGQQAHSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP HYD+HPPMYGP AS+SPSPSLHPMY  SM  YPRIGQQ HSPAPPVAR+SSHHHSS  SPSPPSSSGLGI VTIKPEY IT PPQLSPQI
Subjt:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSM--YPRIGQQAHSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
         DIPRSNFQFDFEFEKKVLAEAEKE  NW+RFGL++ P+KP E TS+MGS+GDPV SKY+ASGL+REAV FAVANYGDNPTKVQEF KGYTLLREMGFSS
Subjt:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLGGTS
        NKVVEALLMYDNDTDKAVAHFL GTS
Subjt:  NKVVEALLMYDNDTDKAVAHFLGGTS

A0A6J1H2H7 uncharacterized protein LOC111459499

1.1e-111

91.15

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Query:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP +Y+AHPPMYGP ASSSPSPS+HPMY QSMYPRIGQQ HSPAPPVAR+SSHHHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+
Subjt:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GDIPRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLGGTS
        NKVVEALLMYDNDTDKAVAHFLGGTS
Subjt:  NKVVEALLMYDNDTDKAVAHFLGGTS

A0A6J1K3U0 velvet complex subunit B

9.3e-111

90.27

Show/hide

Query:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI
        MAYDYRNKP +Y+AHPPMYGP ASSSPSPS+HPMY QSMYPRIGQQ HSPAPPV R+SSHHHSSS  PSPS PSSSGLGIRVTIKPEY IT PPQLSPQ+
Subjt:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSS--PSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQI

Query:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GDIPRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEHPPS+PVES+SSMGS GDPVV+KYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  NKVVEALLMYDNDTDKAVAHFLGGTS
        NKVVEALLMYDNDTDKAVAHFLGGTS
Subjt:  NKVVEALLMYDNDTDKAVAHFLGGTS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G53330.1 Ubiquitin-associated/translation elongation factor EF1B protein

1.4e-63

59.91

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Query:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSL-HPMYAQSMYPRIGQQAHSPAP----PVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLS
        M YDYRNK        PMYGP  S+SPSPS  HPMY    YP+IGQQ   P P    P  R SS  H++SP      SSG+GIRV +KPEY IT PPQL 
Subjt:  MAYDYRNKPAHYDAHPPMYGPTASSSPSPSL-HPMYAQSMYPRIGQQAHSPAP----PVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLS

Query:  PQIGDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVE-STSSMGSIG--DPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLR
        P++GDI RS+FQFDF  E+KVLAEAEK+NP+W++FG E+PP+K  E S SS+G +   D VV KY ASGL+REAV+ AVANYGDNPTKVQEF  G+T +R
Subjt:  PQIGDIPRSNFQFDFEFEKKVLAEAEKENPNWNRFGLEHPPSKPVE-STSSMGSIG--DPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLR

Query:  EMGFSSNKVVEALLMYDNDTDKAVAHFLGGTS
        EMGF +N V +AL M++NDTDKA+AH L G+S
Subjt:  EMGFSSNKVVEALLMYDNDTDKAVAHFLGGTS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGTACGATTACAGAAACAAGCCCGCCCACTACGACGCTCATCCGCCGATGTACGGCCCAACCGCTTCATCCTCCCCATCTCCGTCACTCCATCCCATGTATGCACA
GTCTATGTACCCGAGGATCGGTCAACAAGCTCATTCACCGGCGCCTCCGGTCGCCAGACTCTCATCCCACCACCATTCTTCTTCCCCTTCTCCCTCTCCTCCCTCCTCTT
CAGGATTGGGCATCAGGGTTACCATTAAACCGGAATATCTGATTACTCTGCCGCCTCAATTGTCGCCACAAATTGGAGATATTCCTCGGAGCAATTTCCAATTTGATTTT
GAGTTTGAGAAAAAGGTTTTAGCTGAAGCAGAGAAAGAAAATCCGAATTGGAATCGGTTTGGGTTGGAACATCCTCCTTCTAAACCAGTAGAGTCGACATCTTCAATGGG
TTCTATTGGAGATCCAGTTGTGAGCAAGTATGTTGCATCTGGCTTGAGTCGGGAAGCTGTTTCATTTGCAGTTGCTAATTATGGAGACAATCCCACCAAGGTTCAGGAAT
TTGTGAAAGGCTACACACTCCTACGAGAAATGGGATTCTCATCCAACAAGGTGGTCGAGGCATTACTCATGTATGACAATGACACTGATAAGGCTGTAGCTCATTTTCTT
GGCGGTACGTCTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAYDYRNKPAHYDAHPPMYGPTASSSPSPSLHPMYAQSMYPRIGQQAHSPAPPVARLSSHHHSSSPSPSPPSSSGLGIRVTIKPEYLITLPPQLSPQIGDIPRSNFQFDF
EFEKKVLAEAEKENPNWNRFGLEHPPSKPVESTSSMGSIGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSNKVVEALLMYDNDTDKAVAHFL
GGTS

Spg038442 (gene) of Sponge gourd (cylindrica) v1 genome