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Spg038475 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038475
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L36
Genome locationscaffold12:579095..580308
RNA-Seq ExpressionSpg038475
SyntenySpg038475
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000509 - Ribosomal protein L36e
IPR038097 - Ribosomal protein L36e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3946989.1 hypothetical protein CMV_026816, partial [Castanea mollissima]1.2e-4997.3Show/hide
Query:  VMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRK
        VMAPKQPNTGLFVG N+GHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRK
Subjt:  VMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRK

Query:  MRAGGGGEKKK
        MR+GGGGEKKK
Subjt:  MRAGGGGEKKK

KAG6579388.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia]2.5e-5099.1Show/hide
Query:  VMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRK
        VMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK SKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRK
Subjt:  VMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRK

Query:  MRAGGGGEKKK
        MRAGGGGEKKK
Subjt:  MRAGGGGEKKK

KAG7013242.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-4998.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

XP_010108352.1 60S ribosomal protein L36-2 [Morus notabilis]1.6e-4998.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKTSKRV FVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

XP_022922109.1 60S ribosomal protein L36-2-like [Cucurbita moschata]7.2e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK SKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

TrEMBL top hitse value%identityAlignment
A0A6J1E2F7 60S ribosomal protein L363.5e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK SKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1H2C5 60S ribosomal protein L361.0e-4998.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1IDA3 60S ribosomal protein L363.5e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK SKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1K6N3 60S ribosomal protein L361.0e-4998.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

W9SA20 60S ribosomal protein L367.8e-5098.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKTSKRV FVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

SwissProt top hitse value%identityAlignment
O80929 60S ribosomal protein L36-19.1e-4082.86Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGKTSKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGG--

Query:  -GEKK
          EKK
Subjt:  -GEKK

P52866 60S ribosomal protein L367.5e-3483.52Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKR  FVR+LIREVAGF PYEKRITELLKVGKDKRALKV + K+G H +  K+ E
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE

Q9LRB8 60S ribosomal protein L367.3e-2971.88Show/hide
Query:  VGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGGE
        VGLNKGH VTKK   PRPS RKG  S+RV  VR+++REVAG+APYE+R+ ELLKVGKDKRALK+ KRKLGTH R KKKREEM+ VLRKM+A   GE
Subjt:  VGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGGE

Q9LZ57 60S ribosomal protein L36-35.4e-4082.86Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGG-
        TGLFVGLNKGH+VTK+E  PRP++RKGKTSKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR+GG G 
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGG-

Query:  -EKKK
         EKKK
Subjt:  -EKKK

Q9M352 60S ribosomal protein L36-24.4e-4281.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGKTSKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

Arabidopsis top hitse value%identityAlignment
AT2G37600.1 Ribosomal protein L36e family protein6.5e-4182.86Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGKTSKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGG--

Query:  -GEKK
          EKK
Subjt:  -GEKK

AT3G53740.2 Ribosomal protein L36e family protein3.1e-4381.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGKTSKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT3G53740.3 Ribosomal protein L36e family protein3.1e-4381.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGKTSKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT3G53740.4 Ribosomal protein L36e family protein3.1e-4381.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGKTSKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT5G02450.1 Ribosomal protein L36e family protein3.8e-4182.86Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGG-
        TGLFVGLNKGH+VTK+E  PRP++RKGKTSKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR+GG G 
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGG-

Query:  -EKKK
         EKKK
Subjt:  -EKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAATGGCTCCAAAACAGCCGAATACAGGCCTTTTTGTTGGCCTGAACAAGGGCCATATAGTCACCAAGAAGGAGCTGGCCCCTCGGCCCTCTGATCGCAAAGGAAAAAC
GAGTAAAAGGGTTCTCTTTGTCCGGAGCTTGATCCGCGAAGTTGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTTGGAAAAGACAAGCGTGCTC
TGAAGGTAGCCAAGAGAAAGCTTGGAACTCACAAGAGAGCTAAGAAGAAGCGTGAGGAGATGTCTAACGTTCTAAGAAAGATGAGGGCTGGTGGAGGTGGTGAGAAGAAG
AAGTGA
mRNA sequenceShow/hide mRNA sequence
GTAATGGCTCCAAAACAGCCGAATACAGGCCTTTTTGTTGGCCTGAACAAGGGCCATATAGTCACCAAGAAGGAGCTGGCCCCTCGGCCCTCTGATCGCAAAGGAAAAAC
GAGTAAAAGGGTTCTCTTTGTCCGGAGCTTGATCCGCGAAGTTGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTTGGAAAAGACAAGCGTGCTC
TGAAGGTAGCCAAGAGAAAGCTTGGAACTCACAAGAGAGCTAAGAAGAAGCGTGAGGAGATGTCTAACGTTCTAAGAAAGATGAGGGCTGGTGGAGGTGGTGAGAAGAAG
AAGTGA
Protein sequenceShow/hide protein sequence
VMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGGEKK
K