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Spg038481 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038481
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold12:6826252..6828326
RNA-Seq ExpressionSpg038481
SyntenySpg038481
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152177.2 uncharacterized protein LOC101209077 isoform X1 [Cucumis sativus]2.4e-4271.23Show/hide
Query:  ATATRALNIGVPAP----------AKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGG
        ATAT  L IGVPAP          AK  + PTNF  LT RYPN  L+T  KF AVRAL     GQGG  SG  D DAGGFINQEDV+FLLKL AGSIAGG
Subjt:  ATATRALNIGVPAP----------AKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGG

Query:  AGIKYGSIIFPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS
         GIKYGSIIFPEITKPNIVQALIMISTPV+VAIWLLIKQ REE QS
Subjt:  AGIKYGSIIFPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS

XP_008454177.1 PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo]5.8e-4172.46Show/hide
Query:  ATATRALNIGVPAP--AKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKYGSI
        ATAT  L  G PAP  AK  +  TNF RLT RYPN  L+T  KF A+RAL     GQGG  SG  D DAGGFINQEDV+F LKL AGSIAGG GIKYGSI
Subjt:  ATATRALNIGVPAP--AKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKYGSI

Query:  IFPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS
        IFPEITKPNIVQALIMISTPV+VAIWLLIKQ REE QS
Subjt:  IFPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS

XP_022153461.1 uncharacterized protein LOC111020963 [Momordica charantia]2.7e-5480.29Show/hide
Query:  AATATRALNIGVPAPAKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKYGSII
        AATAT AL IG+PAP KPEKK TNFTRLT RYPN  L+TWPK SA+RALDP++RG+GG SSG  D  AG FINQEDVQFLLKLVAGSIAGGAGIKYGSII
Subjt:  AATATRALNIGVPAPAKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKYGSII

Query:  FPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS
        FP+I KPN+VQALIMISTPV++AIWLLIKQ REE+QS
Subjt:  FPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS

XP_022955512.1 uncharacterized protein LOC111457518 isoform X1 [Cucurbita moschata]9.3e-3970.21Show/hide
Query:  MAAT--ATRALNIGVPAPAKPEKK-PTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKY
        MAAT  AT A  IGVPAP K EKK PTNFTRLT RYPN  L+T PK  A+RAL     GQ G SSGG D D G  I+QEDVQF+LK+ AGSIA G GIKY
Subjt:  MAAT--ATRALNIGVPAPAKPEKK-PTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKY

Query:  GSIIFPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS
        GSIIFPE+TKPNIVQALIM+STPV+VAIWLLI Q R+++QS
Subjt:  GSIIFPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS

XP_038902938.1 uncharacterized protein LOC120089511 [Benincasa hispida]5.4e-4775.91Show/hide
Query:  AATATRALNIGVPAPAKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKYGSII
        A T T AL IG+PAPAK EKKPTNF RLT RYPN  L+T  KF A+RAL     GQGG  SG  D DAGGFINQEDVQFLLKL AGSIAGG GIKYGSII
Subjt:  AATATRALNIGVPAPAKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKYGSII

Query:  FPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS
        FPE+TKPNIVQALIMIS PV+VAIWLLI Q REE+QS
Subjt:  FPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ3 Uncharacterized protein1.1e-4271.23Show/hide
Query:  ATATRALNIGVPAP----------AKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGG
        ATAT  L IGVPAP          AK  + PTNF  LT RYPN  L+T  KF AVRAL     GQGG  SG  D DAGGFINQEDV+FLLKL AGSIAGG
Subjt:  ATATRALNIGVPAP----------AKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGG

Query:  AGIKYGSIIFPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS
         GIKYGSIIFPEITKPNIVQALIMISTPV+VAIWLLIKQ REE QS
Subjt:  AGIKYGSIIFPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS

A0A1S4E0N1 uncharacterized protein LOC1034946602.8e-4172.46Show/hide
Query:  ATATRALNIGVPAP--AKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKYGSI
        ATAT  L  G PAP  AK  +  TNF RLT RYPN  L+T  KF A+RAL     GQGG  SG  D DAGGFINQEDV+F LKL AGSIAGG GIKYGSI
Subjt:  ATATRALNIGVPAP--AKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKYGSI

Query:  IFPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS
        IFPEITKPNIVQALIMISTPV+VAIWLLIKQ REE QS
Subjt:  IFPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS

A0A6J1DKQ3 uncharacterized protein LOC1110209631.3e-5480.29Show/hide
Query:  AATATRALNIGVPAPAKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKYGSII
        AATAT AL IG+PAP KPEKK TNFTRLT RYPN  L+TWPK SA+RALDP++RG+GG SSG  D  AG FINQEDVQFLLKLVAGSIAGGAGIKYGSII
Subjt:  AATATRALNIGVPAPAKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKYGSII

Query:  FPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS
        FP+I KPN+VQALIMISTPV++AIWLLIKQ REE+QS
Subjt:  FPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS

A0A6J1GTV4 uncharacterized protein LOC111457518 isoform X14.5e-3970.21Show/hide
Query:  MAAT--ATRALNIGVPAPAKPEKK-PTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKY
        MAAT  AT A  IGVPAP K EKK PTNFTRLT RYPN  L+T PK  A+RAL     GQ G SSGG D D G  I+QEDVQF+LK+ AGSIA G GIKY
Subjt:  MAAT--ATRALNIGVPAPAKPEKK-PTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKY

Query:  GSIIFPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS
        GSIIFPE+TKPNIVQALIM+STPV+VAIWLLI Q R+++QS
Subjt:  GSIIFPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS

A0A6J1GU58 uncharacterized protein LOC111457518 isoform X25.5e-3768.09Show/hide
Query:  MAAT--ATRALNIGVPAPAKPEKK-PTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKY
        MAAT  AT A  IGVPAP K EKK PTNFTRLT RYPN  L+T PK  A+RAL     GQ G SSGG D D G     +DVQF+LK+ AGSIA G GIKY
Subjt:  MAAT--ATRALNIGVPAPAKPEKK-PTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKY

Query:  GSIIFPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS
        GSIIFPE+TKPNIVQALIM+STPV+VAIWLLI Q R+++QS
Subjt:  GSIIFPEITKPNIVQALIMISTPVIVAIWLLIKQGREEKQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15900.1 unknown protein7.9e-1242.42Show/hide
Query:  TFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKYGSIIFPEITKPNIVQALIMISTPVIVAIWLL
        +FR P++   T   F  V A D +S          + AD G  I QED+ +LLK+  GS+AG A IKYGS++FP+IT+PN+  AL +I  PV++++ LL
Subjt:  TFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKYGSIIFPEITKPNIVQALIMISTPVIVAIWLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGACGGCGACCAGAGCCTTGAATATCGGCGTTCCGGCTCCGGCCAAACCAGAGAAGAAGCCGACGAACTTCACAAGGCTCACATTTCGCTATCCAAATAGCCT
TCTCCATACGTGGCCGAAATTTTCTGCCGTTCGAGCACTCGACCCCCAAAGCAGAGGACAAGGAGGGACTTCGAGCGGCGGCCAAGATGCCGACGCCGGCGGTTTCATCA
ATCAGGAGGATGTGCAATTTTTGTTGAAACTAGTGGCAGGTTCCATAGCAGGAGGAGCTGGAATAAAGTATGGAAGCATAATCTTTCCAGAGATAACCAAACCCAACATT
GTACAGGCTCTTATTATGATATCAACTCCTGTTATTGTAGCCATATGGCTTTTGATAAAGCAGGGTCGTGAAGAGAAACAAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCGACGGCGACCAGAGCCTTGAATATCGGCGTTCCGGCTCCGGCCAAACCAGAGAAGAAGCCGACGAACTTCACAAGGCTCACATTTCGCTATCCAAATAGCCT
TCTCCATACGTGGCCGAAATTTTCTGCCGTTCGAGCACTCGACCCCCAAAGCAGAGGACAAGGAGGGACTTCGAGCGGCGGCCAAGATGCCGACGCCGGCGGTTTCATCA
ATCAGGAGGATGTGCAATTTTTGTTGAAACTAGTGGCAGGTTCCATAGCAGGAGGAGCTGGAATAAAGTATGGAAGCATAATCTTTCCAGAGATAACCAAACCCAACATT
GTACAGGCTCTTATTATGATATCAACTCCTGTTATTGTAGCCATATGGCTTTTGATAAAGCAGGGTCGTGAAGAGAAACAAAGCTGA
Protein sequenceShow/hide protein sequence
MAATATRALNIGVPAPAKPEKKPTNFTRLTFRYPNSLLHTWPKFSAVRALDPQSRGQGGTSSGGQDADAGGFINQEDVQFLLKLVAGSIAGGAGIKYGSIIFPEITKPNI
VQALIMISTPVIVAIWLLIKQGREEKQS