; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038532 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038532
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCoat protein
Genome locationscaffold12:2786707..2790738
RNA-Seq ExpressionSpg038532
SyntenySpg038532
Gene Ontology termsGO:0016075 - rRNA catabolic process (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR004902 - Rhabdovirus nucleoprotein
IPR011907 - Ribonuclease III
IPR014720 - Double-stranded RNA-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAF42361.1 TPA_asm: N [Lolium perenne virus 1]5.7e-4232.52Show/hide
Query:  WTDGELMLKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDL-SGIP
        WTD  +M      L +   D+L          L+  VT +    +M  A+N+    S +  +F+  +    P  ++   L + + F G     D+   I 
Subjt:  WTDGELMLKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDL-SGIP

Query:  KESLVISSCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLDADKGICTMLFEQHV
        +E    + CY AAS LRLFTK  +++ KA   H+K  Y +FYK  +P++ +     C+E + +   N  VFK  L  FLY++  L   KG+C +L+EQH+
Subjt:  KESLVISSCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLDADKGICTMLFEQHV

Query:  RLTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICELLGLA
         LTGMH+++LFV+     H   +EL+S   HR T + LR I DIL   V +   E T  ++ TW Y+R+  +  F  IQ+  C  L+C LA + + +G+A
Subjt:  RLTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICELLGLA

Query:  ENQNIMDIASVKRLPASTQEIYKLWGKRI
         NQN+M+I  ++ + A+ + I   W +R+
Subjt:  ENQNIMDIASVKRLPASTQEIYKLWGKRI

KGN63419.1 hypothetical protein Csa_021883 [Cucumis sativus]4.7e-3628.71Show/hide
Query:  TKKDNSCKGSPTEEVEKIPVPEIVKGVKPTVPLTSVAAPSKIGTMFPNVAGEEKNPLDLIKGLKLVIRNDLPDIGFLTLDGIEEKEWTDGELMLKGGLKL
        T  D S K   +++      P++   V   VP    A P+ +G + P + G  +  +  I+G++LV R +LPD+G+L    I E EW+DG L   GG +L
Subjt:  TKKDNSCKGSPTEEVEKIPVPEIVKGVKPTVPLTSVAAPSKIGTMFPNVAGEEKNPLDLIKGLKLVIRNDLPDIGFLTLDGIEEKEWTDGELMLKGGLKL

Query:  SIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDLSGIPKESLVISSCYTAASL
        SI    +L + A+  W  L+ + T R  G  ML                    Y S                    EPP                     
Subjt:  SIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDLSGIPKESLVISSCYTAASL

Query:  LRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLDADKGICTMLFEQHVRLTGMHSLSLFVRAA
          + +    SW+KA+   LKE Y K YK  +PI   + S AC++      QN+ + KGTLG                                    R A
Subjt:  LRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLDADKGICTMLFEQHVRLTGMHSLSLFVRAA

Query:  AGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICELLGLAENQNIMDIASVKRLP
        + L+ S ++L  AC H+ T   L +++ IL  V     + G  + RGTWKY+R+FG+EYF+ IQSK+C  L C LA ICE +G   NQ+          P
Subjt:  AGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICELLGLAENQNIMDIASVKRLP

Query:  ASTQEIYKLWGKRIHTYF
          T+ IY+ W  RI  ++
Subjt:  ASTQEIYKLWGKRIHTYF

XP_008358190.2 uncharacterized protein LOC103421926 isoform X1 [Malus domestica]4.7e-3628.57Show/hide
Query:  LIKGLKLVIRNDLPDIGFLTLDGIEEK-EWTDGELMLKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFST
        L++  ++ +R  L  +  +T   +E K +W D + +   G+ L +   + L          L+  +T R  G +++L WN+RS +  +  IF  +S   +
Subjt:  LIKGLKLVIRNDLPDIGFLTLDGIEEK-EWTDGELMLKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFST

Query:  PDDVDIVTLRNAMIFGGKTEPPDLSGIPKESLVIS-----SCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQN
           +D+  L + ++    T P  LS     S  ++      C+ AASLL+LF K   SW KA + H++  Y+ + K P+P+K      + V  +    + 
Subjt:  PDDVDIVTLRNAMIFGGKTEPPDLSGIPKESLVIS-----SCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQN

Query:  LPVFKGTLGRFLYNYHYLDADKGICTMLFEQHVRLTGMHSLSLFVRAAAGLHASTQELASACQ-HRQTSNGLRTILDILGNVVPNQ-GVEGTAHERGTWK
          +F+ TLG  LY+   L+  +G+ TMLF  H+  TGMH + LF RA  GL     +L  A   H  TS   ++ILD L  ++ +  G E    +R T++
Subjt:  LPVFKGTLGRFLYNYHYLDADKGICTMLFEQHVRLTGMHSLSLFVRAAAGLHASTQELASACQ-HRQTSNGLRTILDILGNVVPNQ-GVEGTAHERGTWK

Query:  YSRIFGNEYFVKIQSKQCSALICTLATICELLGLAENQNIMDIASVKRLPASTQEIYKLWGKRIHTYFTSE
        Y+R+F ++ F  +QSK C+ L+C LA +C+  G A   +   IA +  +    ++  K     I+ Y  ++
Subjt:  YSRIFGNEYFVKIQSKQCSALICTLATICELLGLAENQNIMDIASVKRLPASTQEIYKLWGKRIHTYFTSE

XP_037459373.1 uncharacterized protein LOC119330369 [Triticum dicoccoides]1.0e-4328.79Show/hide
Query:  SCKGSPTEEVEKIPVPEIVKGVKPTVPLTSVAAPSKIGTMFPNVAGEEKNPLDLIKGLKLVIRNDLPDIGFLTLD--GIEEKEWTDGELMLKGGLKLSIK
        S KGSP    E     E+++         +   P    T   +V   E      +    LV+R++L +   +TL+  G+ EK W D  L     + L   
Subjt:  SCKGSPTEEVEKIPVPEIVKGVKPTVPLTSVAAPSKIGTMFPNVAGEEKNPLDLIKGLKLVIRNDLPDIGFLTLD--GIEEKEWTDGELMLKGGLKLSIK

Query:  TVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDL---SGIPKESLVISSCYTAASL
            L +  K+  + L+ ++T R    +MLLAWN+R        +F  ++  +   D+D+ TL        +T         GI  +  V +  Y +AS 
Subjt:  TVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDL---SGIPKESLVISSCYTAASL

Query:  LRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLDADKGICTMLFEQHVRLTGMHSLSLFVRAA
        LRLF+K PE++  A  +H+   + +FY   +P+  + P   C+E +    +    ++ TL  FLY +  L   K +C ML+EQ +  TG+H ++L++RA 
Subjt:  LRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLDADKGICTMLFEQHVRLTGMHSLSLFVRAA

Query:  AGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICELLGLAENQNIMDIASVKRLP
         GLHAS  +L +   H+ T N L ++  +    V N  VE   + R TWKY+R++G EYF  ++S +C+ L+C LA IC+ L +++NQ++M IA  ++  
Subjt:  AGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICELLGLAENQNIMDIASVKRLP

Query:  ASTQEIYK---LWGKRIHTYFTSEPVSCKDRLLEYTRRSRIPSP-VYQTVNEGSQSAPQYKS
           + I+K   +W  R   +F +       R  E + R    +P   +T  +G+Q     KS
Subjt:  ASTQEIYK---LWGKRIHTYFTSEPVSCKDRLLEYTRRSRIPSP-VYQTVNEGSQSAPQYKS

YP_009130617.1 polyprotein [Black grass varicosavirus-like virus]9.2e-4835.37Show/hide
Query:  WTDGELMLKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDLSGIPK
        WTD  ++ K   +L    ++EL D   N    L+  VT +   ++M+ A+N+ S     +    R      P +++   L   + F G  E      + +
Subjt:  WTDGELMLKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDLSGIPK

Query:  ESLVISSCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLDADKGICTMLFEQHVR
        E  V   CY AAS LRLFTK  E++ +AF E +K  Y +FYK  +P+ +  P   C+E + +   N  V++  L  FLY++  L   KG+C +L+EQH+ 
Subjt:  ESLVISSCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLDADKGICTMLFEQHVR

Query:  LTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICELLGLAE
        LTGMH++SLFV+   G H   +EL+S   HR T + LR I DIL +     G++G   E+GTW Y+R+  + YF +IQ+K C  L+C LA +  L+G+A 
Subjt:  LTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICELLGLAE

Query:  NQNIMDIASVKRLPASTQEIYKLWGKRI
        NQNIM I  ++R+    + I   W  R+
Subjt:  NQNIMDIASVKRLPASTQEIYKLWGKRI

TrEMBL top hitse value%identityAlignment
A0A024HA00 Coat protein4.4e-4835.37Show/hide
Query:  WTDGELMLKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDLSGIPK
        WTD  ++ K   +L    ++EL D   N    L+  VT +   ++M+ A+N+ S     +    R      P +++   L   + F G  E      + +
Subjt:  WTDGELMLKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDLSGIPK

Query:  ESLVISSCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLDADKGICTMLFEQHVR
        E  V   CY AAS LRLFTK  E++ +AF E +K  Y +FYK  +P+ +  P   C+E + +   N  V++  L  FLY++  L   KG+C +L+EQH+ 
Subjt:  ESLVISSCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLDADKGICTMLFEQHVR

Query:  LTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICELLGLAE
        LTGMH++SLFV+   G H   +EL+S   HR T + LR I DIL +     G++G   E+GTW Y+R+  + YF +IQ+K C  L+C LA +  L+G+A 
Subjt:  LTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICELLGLAE

Query:  NQNIMDIASVKRLPASTQEIYKLWGKRI
        NQNIM I  ++R+    + I   W  R+
Subjt:  NQNIMDIASVKRLPASTQEIYKLWGKRI

A0A0A0LR10 Uncharacterized protein2.3e-3628.71Show/hide
Query:  TKKDNSCKGSPTEEVEKIPVPEIVKGVKPTVPLTSVAAPSKIGTMFPNVAGEEKNPLDLIKGLKLVIRNDLPDIGFLTLDGIEEKEWTDGELMLKGGLKL
        T  D S K   +++      P++   V   VP    A P+ +G + P + G  +  +  I+G++LV R +LPD+G+L    I E EW+DG L   GG +L
Subjt:  TKKDNSCKGSPTEEVEKIPVPEIVKGVKPTVPLTSVAAPSKIGTMFPNVAGEEKNPLDLIKGLKLVIRNDLPDIGFLTLDGIEEKEWTDGELMLKGGLKL

Query:  SIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDLSGIPKESLVISSCYTAASL
        SI    +L + A+  W  L+ + T R  G  ML                    Y S                    EPP                     
Subjt:  SIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDLSGIPKESLVISSCYTAASL

Query:  LRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLDADKGICTMLFEQHVRLTGMHSLSLFVRAA
          + +    SW+KA+   LKE Y K YK  +PI   + S AC++      QN+ + KGTLG                                    R A
Subjt:  LRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLDADKGICTMLFEQHVRLTGMHSLSLFVRAA

Query:  AGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICELLGLAENQNIMDIASVKRLP
        + L+ S ++L  AC H+ T   L +++ IL  V     + G  + RGTWKY+R+FG+EYF+ IQSK+C  L C LA ICE +G   NQ+          P
Subjt:  AGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICELLGLAENQNIMDIASVKRLP

Query:  ASTQEIYKLWGKRIHTYF
          T+ IY+ W  RI  ++
Subjt:  ASTQEIYKLWGKRIHTYF

A0A0D6DU22 Polyprotein4.4e-4835.37Show/hide
Query:  WTDGELMLKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDLSGIPK
        WTD  ++ K   +L    ++EL D   N    L+  VT +   ++M+ A+N+ S     +    R      P +++   L   + F G  E      + +
Subjt:  WTDGELMLKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDLSGIPK

Query:  ESLVISSCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLDADKGICTMLFEQHVR
        E  V   CY AAS LRLFTK  E++ +AF E +K  Y +FYK  +P+ +  P   C+E + +   N  V++  L  FLY++  L   KG+C +L+EQH+ 
Subjt:  ESLVISSCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLDADKGICTMLFEQHVR

Query:  LTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICELLGLAE
        LTGMH++SLFV+   G H   +EL+S   HR T + LR I DIL +     G++G   E+GTW Y+R+  + YF +IQ+K C  L+C LA +  L+G+A 
Subjt:  LTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICELLGLAE

Query:  NQNIMDIASVKRLPASTQEIYKLWGKRI
        NQNIM I  ++R+    + I   W  R+
Subjt:  NQNIMDIASVKRLPASTQEIYKLWGKRI

A0A2R6QI64 Nucleoprotein7.3e-3529.67Show/hide
Query:  EWTDGELMLKGGLKL----SIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDL
        EW D +L+ K  L L     ++T  +     ++    L K+V+   VG ++ LAWN+ SP     A+F R   +    D  + TL   +I   K+ P   
Subjt:  EWTDGELMLKGGLKL----SIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIFGGKTEPPDL

Query:  SGIPKESLVISSCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLD-ADKGICTML
             E    +  Y A S LRL TK  E++   F  H+   Y  FY+  +PI+  +  + CV      L+ + + K ++  FLY++  L+  DK +C  L
Subjt:  SGIPKESLVISSCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNYHYLD-ADKGICTML

Query:  FEQHVRLTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICE
        FEQH+  TG+H+  LF+ AA  L     EL +   +R T N +  I  IL N     G     H + TWKY+R+F    F ++Q+K C+ L+  LA +  
Subjt:  FEQHVRLTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTLATICE

Query:  LLGLAENQNIMDIASVKRLPASTQEIYKLWGKRIHTY
        +LG +  +N++ I  ++ +  +   +Y+   K I+ +
Subjt:  LLGLAENQNIMDIASVKRLPASTQEIYKLWGKRIHTY

A0A6P4B9M9 uncharacterized protein LOC1074294123.3e-3535.15Show/hide
Query:  GFLTLDGIEEK-EWTDGELM-LKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIF
        GF    G E + +WTD  L+ LKG +     T  +L    K   + L   V+ R +G +M+ AWN+     + + +F      +TPDD+D   LR     
Subjt:  GFLTLDGIEEK-EWTDGELM-LKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDIVTLRNAMIF

Query:  GGKTE----PPDLSGIPKESLVIS-SCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNY
        GG  E    P D      +S+  +   Y AA LLRL TK   ++  A++ H+K  YS+   RP+ I+   P +  ++ I   LQ  PVF  TL RFLY++
Subjt:  GGKTE----PPDLSGIPKESLVIS-SCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLYNY

Query:  HYLDAD-KGICTMLFEQHVRLTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSK
        + L    KG     FEQH+ LTG+HS  LF R A  L+A+  +L+ A  HR T  GL  +  IL N             R TWKY+R+F  E FV + +K
Subjt:  HYLDAD-KGICTMLFEQHVRLTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSK

Query:  QCSALICTLATICELLGLAENQNIMDIASV
         C  L   LA I E +G  E+Q   +I S+
Subjt:  QCSALICTLATICELLGLAENQNIMDIASV

SwissProt top hitse value%identityAlignment
O04492 Double-stranded RNA-binding protein 13.1e-0639.44Show/hide
Query:  KDRLLEYTRRSRIPSPVYQTVNEGSQSAPQYKSTVLVDEVCYASLIHSVTEGGAEQDAARIALEYISKKAK
        K RL EY ++ ++P+PVY+ V EG      ++STV++D V Y SL        AEQ AA +AL  ++K ++
Subjt:  KDRLLEYTRRSRIPSPVYQTVNEGSQSAPQYKSTVLVDEVCYASLIHSVTEGGAEQDAARIALEYISKKAK

Q0DJA3 Double-stranded RNA-binding protein 34.5e-0538.16Show/hide
Query:  KDRLLEYTRRSRIPSPVYQTVNEGSQSAPQYKSTVLVDEVCYASLIHSVTEGGAEQDAARIALEYISKKAKDDAFI
        K RL EY +++ + +P Y T  EG    P +KSTV+++   Y SL        AEQ AA +AL  I K    +A I
Subjt:  KDRLLEYTRRSRIPSPVYQTVNEGSQSAPQYKSTVLVDEVCYASLIHSVTEGGAEQDAARIALEYISKKAKDDAFI

Q0IQN6 Double-stranded RNA-binding protein 84.5e-0538.16Show/hide
Query:  KDRLLEYTRRSRIPSPVYQTVNEGSQSAPQYKSTVLVDEVCYASLIHSVTEGGAEQDAARIALEYISKKAKDDAFI
        K RL EY +++ + +P Y T  EG    P +KSTV+++   Y SL        AEQ AA +AL  I K    +A I
Subjt:  KDRLLEYTRRSRIPSPVYQTVNEGSQSAPQYKSTVLVDEVCYASLIHSVTEGGAEQDAARIALEYISKKAKDDAFI

Q0IV63 Double-stranded RNA-binding protein 74.5e-0538.16Show/hide
Query:  KDRLLEYTRRSRIPSPVYQTVNEGSQSAPQYKSTVLVDEVCYASLIHSVTEGGAEQDAARIALEYISKKAKDDAFI
        K RL EY +++ + +P Y T  EG    P +KSTV+++   Y SL        AEQ AA +AL  I K    +A I
Subjt:  KDRLLEYTRRSRIPSPVYQTVNEGSQSAPQYKSTVLVDEVCYASLIHSVTEGGAEQDAARIALEYISKKAKDDAFI

Q91QN9 Nucleoprotein6.8e-3026.37Show/hide
Query:  KLVIRNDLPDIGFLTLDGIEEKEWTDGELMLKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDI
        KL + +   D+  +T     ++ W D   +     KLS+ +  +     K F + L    + R +   +++ WN+RS       IF  +       DVD+
Subjt:  KLVIRNDLPDIGFLTLDGIEEKEWTDGELMLKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYFSTPDDVDI

Query:  VTLR-------NAMIFGGKTEPPDLSGIPKESLVISSCYTAASLLRLFTKRPESWKKAF-REHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPV
          L        +AM+   +T   D S I    ++ +  + AAS L++F K    W +A+  +H+++ Y+ F K  YP K +  ++ C E +++  Q   +
Subjt:  VTLR-------NAMIFGGKTEPPDLSGIPKESLVISSCYTAASLLRLFTKRPESWKKAF-REHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPV

Query:  FKGTLGRFLYNYHYLDADKGICTMLFEQHVRLTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIF
        ++GTLGR LY    + AD     MLF+QH+  TGMH +  F  A   + A+T  L SA  + Q    L  +  ++   +           R TW+++RIF
Subjt:  FKGTLGRFLYNYHYLDADKGICTMLFEQHVRLTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIF

Query:  GNEYFVKIQSKQCSALICTLATICELLGLA-ENQNIMDIASVKRLPASTQEIYKLWGKRIHTYF
            F  +Q+K C+  +  LA I  +  L+ E  N ++IA +K++    +   +   K I+ +F
Subjt:  GNEYFVKIQSKQCSALICTLATICELLGLA-ENQNIMDIASVKRLPASTQEIYKLWGKRIHTYF

Arabidopsis top hitse value%identityAlignment
AT1G09700.1 dsRNA-binding domain-like superfamily protein2.2e-0739.44Show/hide
Query:  KDRLLEYTRRSRIPSPVYQTVNEGSQSAPQYKSTVLVDEVCYASLIHSVTEGGAEQDAARIALEYISKKAK
        K RL EY ++ ++P+PVY+ V EG      ++STV++D V Y SL        AEQ AA +AL  ++K ++
Subjt:  KDRLLEYTRRSRIPSPVYQTVNEGSQSAPQYKSTVLVDEVCYASLIHSVTEGGAEQDAARIALEYISKKAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGGTGGAGGATGGCAGAGGCGGGGATAGTGATAGTGAGTGTGTAAGTTCAAATTCCAAGTGCGGCTCCAGCGTCCGTTCCACCCCGAAGCCCTCTGATTCGAC
TCGTAAGTCTACGATATTGTTGCCTGTTATCGTTTTTGGGAATGCGTTCTTCCTATTCTCTTGCGAGTCAGAATACTGGCAGTTCACTAAAAAAGACAATAGCTGCAAAG
GTAGCCCTACTGAGGAGGTGGAAAAAATTCCGGTGCCTGAAATAGTAAAAGGAGTGAAACCCACTGTCCCTCTAACTTCTGTAGCTGCTCCATCTAAAATTGGTACAATG
TTCCCAAATGTCGCAGGGGAGGAAAAAAATCCATTAGATCTTATCAAAGGATTAAAACTAGTGATAAGGAACGACCTTCCAGATATAGGCTTTTTGACTCTGGATGGAAT
TGAGGAAAAAGAGTGGACTGATGGGGAATTGATGCTCAAAGGGGGTTTAAAGCTCAGTATAAAGACAGTTGATGAGCTTTATGACACTGCTAAAAACTTCTGGAGTTTAC
TATCAAAGGAAGTGACTGTCAGGGGTGTTGGAGAAATGATGCTACTGGCTTGGAATATCAGGTCTCCCACGTCGCAGACAGAAGCTATTTTCAGAAGGGAAAGTTATTTC
TCTACTCCTGATGATGTAGACATTGTAACCTTGCGCAATGCTATGATATTTGGGGGGAAAACAGAACCTCCTGACCTATCTGGAATCCCCAAGGAAAGTCTTGTGATAAG
CTCGTGTTATACTGCCGCTAGCCTGCTTCGTCTCTTTACCAAAAGACCTGAAAGTTGGAAAAAGGCATTCCGCGAGCATCTAAAGGAAGGCTACTCTAAGTTTTATAAAA
GACCATATCCTATCAAGCATTATATGCCGAGTGATGCCTGTGTTGAGAGGATATGGCAAACCCTGCAAAACCTTCCTGTGTTCAAAGGTACGCTGGGGAGATTCCTATAC
AATTACCATTACCTAGATGCTGATAAGGGTATATGTACCATGCTGTTTGAGCAACATGTAAGGCTTACCGGAATGCATTCATTAAGCTTGTTTGTTAGGGCTGCTGCAGG
ACTACATGCGTCCACTCAGGAGTTAGCATCAGCTTGTCAGCATAGGCAAACATCTAATGGGCTCAGAACAATTTTGGATATCTTAGGGAATGTAGTGCCCAATCAAGGAG
TAGAAGGAACAGCACACGAGCGGGGGACCTGGAAATATTCAAGAATCTTTGGAAATGAGTACTTTGTAAAGATCCAGTCCAAACAATGTAGTGCGTTAATCTGTACCCTG
GCTACTATCTGCGAACTTCTAGGACTGGCAGAAAATCAGAACATCATGGACATAGCTAGTGTTAAGAGGCTCCCGGCTAGCACCCAAGAAATTTATAAACTATGGGGGAA
ACGAATTCACACATACTTCACATCAGAACCAGTCTCATGCAAAGATCGTTTGCTTGAGTACACTCGAAGGTCAAGGATCCCATCACCTGTGTATCAGACTGTTAATGAAG
GATCCCAAAGTGCACCTCAATATAAGTCAACTGTCTTGGTTGATGAGGTATGTTATGCGTCTCTAATACATTCCGTAACTGAAGGGGGAGCTGAACAAGATGCTGCAAGA
ATTGCTCTCGAGTACATATCAAAAAAGGCAAAGGATGATGCCTTTATTCTCCTTCATAAGTTAGGACTTAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGATGGTGGAGGATGGCAGAGGCGGGGATAGTGATAGTGAGTGTGTAAGTTCAAATTCCAAGTGCGGCTCCAGCGTCCGTTCCACCCCGAAGCCCTCTGATTCGAC
TCGTAAGTCTACGATATTGTTGCCTGTTATCGTTTTTGGGAATGCGTTCTTCCTATTCTCTTGCGAGTCAGAATACTGGCAGTTCACTAAAAAAGACAATAGCTGCAAAG
GTAGCCCTACTGAGGAGGTGGAAAAAATTCCGGTGCCTGAAATAGTAAAAGGAGTGAAACCCACTGTCCCTCTAACTTCTGTAGCTGCTCCATCTAAAATTGGTACAATG
TTCCCAAATGTCGCAGGGGAGGAAAAAAATCCATTAGATCTTATCAAAGGATTAAAACTAGTGATAAGGAACGACCTTCCAGATATAGGCTTTTTGACTCTGGATGGAAT
TGAGGAAAAAGAGTGGACTGATGGGGAATTGATGCTCAAAGGGGGTTTAAAGCTCAGTATAAAGACAGTTGATGAGCTTTATGACACTGCTAAAAACTTCTGGAGTTTAC
TATCAAAGGAAGTGACTGTCAGGGGTGTTGGAGAAATGATGCTACTGGCTTGGAATATCAGGTCTCCCACGTCGCAGACAGAAGCTATTTTCAGAAGGGAAAGTTATTTC
TCTACTCCTGATGATGTAGACATTGTAACCTTGCGCAATGCTATGATATTTGGGGGGAAAACAGAACCTCCTGACCTATCTGGAATCCCCAAGGAAAGTCTTGTGATAAG
CTCGTGTTATACTGCCGCTAGCCTGCTTCGTCTCTTTACCAAAAGACCTGAAAGTTGGAAAAAGGCATTCCGCGAGCATCTAAAGGAAGGCTACTCTAAGTTTTATAAAA
GACCATATCCTATCAAGCATTATATGCCGAGTGATGCCTGTGTTGAGAGGATATGGCAAACCCTGCAAAACCTTCCTGTGTTCAAAGGTACGCTGGGGAGATTCCTATAC
AATTACCATTACCTAGATGCTGATAAGGGTATATGTACCATGCTGTTTGAGCAACATGTAAGGCTTACCGGAATGCATTCATTAAGCTTGTTTGTTAGGGCTGCTGCAGG
ACTACATGCGTCCACTCAGGAGTTAGCATCAGCTTGTCAGCATAGGCAAACATCTAATGGGCTCAGAACAATTTTGGATATCTTAGGGAATGTAGTGCCCAATCAAGGAG
TAGAAGGAACAGCACACGAGCGGGGGACCTGGAAATATTCAAGAATCTTTGGAAATGAGTACTTTGTAAAGATCCAGTCCAAACAATGTAGTGCGTTAATCTGTACCCTG
GCTACTATCTGCGAACTTCTAGGACTGGCAGAAAATCAGAACATCATGGACATAGCTAGTGTTAAGAGGCTCCCGGCTAGCACCCAAGAAATTTATAAACTATGGGGGAA
ACGAATTCACACATACTTCACATCAGAACCAGTCTCATGCAAAGATCGTTTGCTTGAGTACACTCGAAGGTCAAGGATCCCATCACCTGTGTATCAGACTGTTAATGAAG
GATCCCAAAGTGCACCTCAATATAAGTCAACTGTCTTGGTTGATGAGGTATGTTATGCGTCTCTAATACATTCCGTAACTGAAGGGGGAGCTGAACAAGATGCTGCAAGA
ATTGCTCTCGAGTACATATCAAAAAAGGCAAAGGATGATGCCTTTATTCTCCTTCATAAGTTAGGACTTAAATAG
Protein sequenceShow/hide protein sequence
MMMVEDGRGGDSDSECVSSNSKCGSSVRSTPKPSDSTRKSTILLPVIVFGNAFFLFSCESEYWQFTKKDNSCKGSPTEEVEKIPVPEIVKGVKPTVPLTSVAAPSKIGTM
FPNVAGEEKNPLDLIKGLKLVIRNDLPDIGFLTLDGIEEKEWTDGELMLKGGLKLSIKTVDELYDTAKNFWSLLSKEVTVRGVGEMMLLAWNIRSPTSQTEAIFRRESYF
STPDDVDIVTLRNAMIFGGKTEPPDLSGIPKESLVISSCYTAASLLRLFTKRPESWKKAFREHLKEGYSKFYKRPYPIKHYMPSDACVERIWQTLQNLPVFKGTLGRFLY
NYHYLDADKGICTMLFEQHVRLTGMHSLSLFVRAAAGLHASTQELASACQHRQTSNGLRTILDILGNVVPNQGVEGTAHERGTWKYSRIFGNEYFVKIQSKQCSALICTL
ATICELLGLAENQNIMDIASVKRLPASTQEIYKLWGKRIHTYFTSEPVSCKDRLLEYTRRSRIPSPVYQTVNEGSQSAPQYKSTVLVDEVCYASLIHSVTEGGAEQDAAR
IALEYISKKAKDDAFILLHKLGLK