; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038549 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038549
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold12:5293128..5294493
RNA-Seq ExpressionSpg038549
SyntenySpg038549
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7822363.1 auxin transport protein BIG [Senna tora]7.8e-1341.12Show/hide
Query:  FTLEGSGTFSVKSTLSAL--HTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVW
        + L+ SG+++  S    L   T R  +   L    W+ K P +VK F+WT AL+ INT D +Q+R P   +SPNVCVMC  N E+ + L +HCE A  +W
Subjt:  FTLEGSGTFSVKSTLSAL--HTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVW

Query:  NHFSGVF
        N   G F
Subjt:  NHFSGVF

OVA13883.1 Pectinesterase inhibitor domain [Macleaya cordata]3.0e-1236.97Show/hide
Query:  GTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVWNHFSGVF-
        G F+VKS   AL T  +         IW  K P R+ FF W ++LH I T+D +Q R  SL    N CV+C+K  ES   +L+HC F   +WN     F 
Subjt:  GTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVWNHFSGVF-

Query:  -------NIKLLASNWSAQ
               ++ LLA +WS++
Subjt:  -------NIKLLASNWSAQ

TYK07901.1 DUF21 domain-containing protein [Cucumis melo var. makuwa]4.9e-1538.32Show/hide
Query:  FTLEGSGTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVWNH
        +TL  +G+F++KST   L      +   L   IW+ K  K+VKFFLW+LA  ++NT  K+Q  F    +SP++C +C K EE+   L +HC F +K WN 
Subjt:  FTLEGSGTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVWNH

Query:  FSGVFNI
           +F++
Subjt:  FSGVFNI

TYK31299.1 protein FAM91A1 [Cucumis melo var. makuwa]7.1e-1438.83Show/hide
Query:  LEGSGTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVWNHFS
        LE SG FS K   S +         +    IW+ K  K+VKFFLW+LA  ++N  +K+Q +FP+  +SP++C +C+K  E+   L +HC+FA K WN   
Subjt:  LEGSGTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVWNHFS

Query:  GVF
         +F
Subjt:  GVF

VVA31005.1 Hypothetical predicted protein, partial [Prunus dulcis]1.3e-1239Show/hide
Query:  NFTLEGSGTFSVKSTLS-ALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVW
        ++ +E  G+FS KS  S  L T R +    +   IW+ KTP +++FF+W  A  NINT D +Q R P + +SP+ CV+C +N E+   L +HC ++ K+W
Subjt:  NFTLEGSGTFSVKSTLS-ALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVW

TrEMBL top hitse value%identityAlignment
A0A5D3C7R2 DUF21 domain-containing protein2.4e-1538.32Show/hide
Query:  FTLEGSGTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVWNH
        +TL  +G+F++KST   L      +   L   IW+ K  K+VKFFLW+LA  ++NT  K+Q  F    +SP++C +C K EE+   L +HC F +K WN 
Subjt:  FTLEGSGTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVWNH

Query:  FSGVFNI
           +F++
Subjt:  FSGVFNI

A0A5D3E632 Protein FAM91A13.4e-1438.83Show/hide
Query:  LEGSGTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVWNHFS
        LE SG FS K   S +         +    IW+ K  K+VKFFLW+LA  ++N  +K+Q +FP+  +SP++C +C+K  E+   L +HC+FA K WN   
Subjt:  LEGSGTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVWNHFS

Query:  GVF
         +F
Subjt:  GVF

A0A5E4FU23 zf-RVT domain-containing protein (Fragment)6.4e-1339Show/hide
Query:  NFTLEGSGTFSVKSTLS-ALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVW
        ++ +E  G+FS KS  S  L T R +    +   IW+ KTP +++FF+W  A  NINT D +Q R P + +SP+ CV+C +N E+   L +HC ++ K+W
Subjt:  NFTLEGSGTFSVKSTLS-ALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVW

M5VI38 zf-RVT domain-containing protein (Fragment)4.9e-1341.67Show/hide
Query:  LEGSGTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVW
        L+GSG FS KS  S L     +   +   QIW+ K P +VKF +W LAL  +NT D +Q + P + +SP+ C +C   +ESA  +L+HC F+ +VW
Subjt:  LEGSGTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVW

M5VS59 Reverse transcriptase domain-containing protein (Fragment)8.4e-1333.62Show/hide
Query:  NFTLEGSGTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVWN
        ++ +E  G+FS KS  S L +  R +       IW+ KTP +++FF+W  A   INT D +Q R P +++SP+ CV+C +N E+   L +HC ++ ++W 
Subjt:  NFTLEGSGTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASRLLVHCEFAEKVWN

Query:  HFSGVFNIKLLASNWS
           G   ++  + N+S
Subjt:  HFSGVFNIKLLASNWS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGGAACTCCTCGATCATCTCCTTGAGGCCTCGGGGCCTAGATGGGGCCCGTATTTGCTCACAAACTTCACCCTTGAGGGCTCTGGAACTTTTTCTGTCAAATC
TACCCTTTCGGCCTTGCACACGAAAAGAAGGATTCTGGAGGAAGCCTTATGTGGTCAGATCTGGGAAGGCAAAACTCCTAAAAGGGTGAAGTTTTTCTTATGGACTCTAG
CCCTTCACAACATTAATACAATGGACAAGGTTCAGAGCAGATTTCCTAGTCTCCAAGTTAGCCCCAACGTTTGTGTGATGTGTATGAAAAACGAAGAATCAGCTTCCCGC
CTCTTGGTTCACTGTGAGTTCGCCGAGAAGGTGTGGAACCACTTTTCTGGGGTTTTCAACATAAAGCTCTTGGCCTCTAATTGGAGTGCCCAAGATAGCGTTTTTTATGA
TTATTCTGCAGCCATGATCAACCTTCATTGGAAGACGTTTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGGAACTCCTCGATCATCTCCTTGAGGCCTCGGGGCCTAGATGGGGCCCGTATTTGCTCACAAACTTCACCCTTGAGGGCTCTGGAACTTTTTCTGTCAAATC
TACCCTTTCGGCCTTGCACACGAAAAGAAGGATTCTGGAGGAAGCCTTATGTGGTCAGATCTGGGAAGGCAAAACTCCTAAAAGGGTGAAGTTTTTCTTATGGACTCTAG
CCCTTCACAACATTAATACAATGGACAAGGTTCAGAGCAGATTTCCTAGTCTCCAAGTTAGCCCCAACGTTTGTGTGATGTGTATGAAAAACGAAGAATCAGCTTCCCGC
CTCTTGGTTCACTGTGAGTTCGCCGAGAAGGTGTGGAACCACTTTTCTGGGGTTTTCAACATAAAGCTCTTGGCCTCTAATTGGAGTGCCCAAGATAGCGTTTTTTATGA
TTATTCTGCAGCCATGATCAACCTTCATTGGAAGACGTTTTTGTAG
Protein sequenceShow/hide protein sequence
MGKELLDHLLEASGPRWGPYLLTNFTLEGSGTFSVKSTLSALHTKRRILEEALCGQIWEGKTPKRVKFFLWTLALHNINTMDKVQSRFPSLQVSPNVCVMCMKNEESASR
LLVHCEFAEKVWNHFSGVFNIKLLASNWSAQDSVFYDYSAAMINLHWKTFL