; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038550 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038550
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMethyl-CpG-binding domain-containing protein 13 isoform X1
Genome locationscaffold12:5037029..5042978
RNA-Seq ExpressionSpg038550
SyntenySpg038550
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR040411 - Uncharacterized protein At5g23160-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052773.1 60S ribosomal protein L44 [Cucumis melo var. makuwa]9.0e-4955.46Show/hide
Query:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI
        MA+SS K  PSK+   FL  CF SS K+ ++K  +   RNRR  SL FRF KSSATVPVD A P       D+ SFSPDFKKPPP   +T +AP V  EI
Subjt:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI

Query:  V-----ESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVS-HLPCAAA---PPSSDRLKPAPKPSTNSPATKFDPVIVI
        V     ES+KPSQTRKK ESTQS    +++ P ++ AA LHSVS PS  L+ QKD K++VS HLP A A   P  SD  KP PK +TN P    D VI++
Subjt:  V-----ESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVS-HLPCAAA---PPSSDRLKPAPKPSTNSPATKFDPVIVI

Query:  VALAMVVLWGRLCAILCTSALFYFGRRRR
        V +A++VLWGRLCAILCT+ALFY GRR R
Subjt:  VALAMVVLWGRLCAILCTSALFYFGRRRR

KAG6606901.1 60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia]7.1e-7067.25Show/hide
Query:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI
        MAE+S+K+ PSK  LHFLLRCFGSSPKV ++K P TGR + R+PS RFRF KSSATVP+D AVPEI V CDD ASFSP+FKKPPP P + SRAP VR +I
Subjt:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI

Query:  VESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPC--AAAPPSSDRLKPAPKPSTNSPATKFDPVIVIVALAMVV
        VE IKPSQT KKTEST+ +S    + PAKRTAALLHS+SLPS RL+ QKDLKKTVSHL       P SS+R KPA K   NSPA   D +IVIVA+A+VV
Subjt:  VESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPC--AAAPPSSDRLKPAPKPSTNSPATKFDPVIVIVALAMVV

Query:  LWGRLCAILCTSALFYFGRRRRFKFPEEG
        LWG+LCAILCT+ALFYF RR R +   EG
Subjt:  LWGRLCAILCTSALFYFGRRRRFKFPEEG

KGN58547.1 hypothetical protein Csa_002056 [Cucumis sativus]3.4e-4853.09Show/hide
Query:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI
        MA+SS+ I PSK+ LHFL  CF SS K+ ++KA +   R RR  S  FRF KSSATVPVD A P       D+ SF P+FKK PP   +  +AP V  EI
Subjt:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI

Query:  V--ESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVS-HLPCAAA---PPSSDRLKPAPKPSTNSPATKFDPVIVIVAL
        V   S+KPSQTRKK  STQS    +++ P ++TAALLHSVSLPS +L+ QK  KK VS HLP A A   P  SD  KP PK  T  P   FD VI++V +
Subjt:  V--ESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVS-HLPCAAA---PPSSDRLKPAPKPSTNSPATKFDPVIVIVAL

Query:  AMVVLWGRLCAILCTSALFYFGRRRRFKFPEEGFYIDPDNGNA
        A+V+LWGRLCAILCT+ALFY GRR R +       I+PD G +
Subjt:  AMVVLWGRLCAILCTSALFYFGRRRRFKFPEEGFYIDPDNGNA

XP_022934627.1 uncharacterized protein LOC111441760 [Cucurbita moschata]3.5e-4555.17Show/hide
Query:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI
        MAESSD     K RLHFL RCF SSP V  QKA      NRR PSLRFRF KSSATVP+DAAVP     C D+ S SP+F  PPPP       P ++ EI
Subjt:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI

Query:  V-----ESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPCAAAP-----PSSDRLKPAPKPSTNSPATKFDPVIV
        +     ++IKPS+TRKK+ESTQS  K+E       T +   +    SP L  +K LKK++SHLP AAA      PSSDR     KP TNSP  KFD VIV
Subjt:  V-----ESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPCAAAP-----PSSDRLKPAPKPSTNSPATKFDPVIV

Query:  IVALAMVVLWGRLCAILCTSALFYFGRRRRFK
        IVA+A+VVLWGRLCAILCT+ALFY  R  R K
Subjt:  IVALAMVVLWGRLCAILCTSALFYFGRRRRFK

XP_022949237.1 uncharacterized protein LOC111452650 [Cucurbita moschata]3.2e-7067.25Show/hide
Query:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI
        MAE+S+K+ PSK  LHFLLRCFGSSPKV ++K P TGRR+ R+PS RFRF KSSATVP+D AVPEI V CDD ASFSP+FKKPPP P + SRAP VR +I
Subjt:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI

Query:  VESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPC--AAAPPSSDRLKPAPKPSTNSPATKFDPVIVIVALAMVV
        VE IKPSQ  KKTEST+S+     + PAKRTAALLHS+SLPS RL+ QKD KKTVSHL       P SS+R KPA KP  NSPA   D +IVIVA+A+VV
Subjt:  VESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPC--AAAPPSSDRLKPAPKPSTNSPATKFDPVIVIVALAMVV

Query:  LWGRLCAILCTSALFYFGRRRRFKFPEEG
        LWG+LCAILCT+ALFYF RR R +   EG
Subjt:  LWGRLCAILCTSALFYFGRRRRFKFPEEG

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ2 Uncharacterized protein1.7e-4853.09Show/hide
Query:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI
        MA+SS+ I PSK+ LHFL  CF SS K+ ++KA +   R RR  S  FRF KSSATVPVD A P       D+ SF P+FKK PP   +  +AP V  EI
Subjt:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI

Query:  V--ESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVS-HLPCAAA---PPSSDRLKPAPKPSTNSPATKFDPVIVIVAL
        V   S+KPSQTRKK  STQS    +++ P ++TAALLHSVSLPS +L+ QK  KK VS HLP A A   P  SD  KP PK  T  P   FD VI++V +
Subjt:  V--ESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVS-HLPCAAA---PPSSDRLKPAPKPSTNSPATKFDPVIVIVAL

Query:  AMVVLWGRLCAILCTSALFYFGRRRRFKFPEEGFYIDPDNGNA
        A+V+LWGRLCAILCT+ALFY GRR R +       I+PD G +
Subjt:  AMVVLWGRLCAILCTSALFYFGRRRRFKFPEEGFYIDPDNGNA

A0A5A7UA28 60S ribosomal protein L444.3e-4955.46Show/hide
Query:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI
        MA+SS K  PSK+   FL  CF SS K+ ++K  +   RNRR  SL FRF KSSATVPVD A P       D+ SFSPDFKKPPP   +T +AP V  EI
Subjt:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI

Query:  V-----ESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVS-HLPCAAA---PPSSDRLKPAPKPSTNSPATKFDPVIVI
        V     ES+KPSQTRKK ESTQS    +++ P ++ AA LHSVS PS  L+ QKD K++VS HLP A A   P  SD  KP PK +TN P    D VI++
Subjt:  V-----ESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVS-HLPCAAA---PPSSDRLKPAPKPSTNSPATKFDPVIVI

Query:  VALAMVVLWGRLCAILCTSALFYFGRRRR
        V +A++VLWGRLCAILCT+ALFY GRR R
Subjt:  VALAMVVLWGRLCAILCTSALFYFGRRRR

A0A6J1F3C2 uncharacterized protein LOC1114417601.7e-4555.17Show/hide
Query:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI
        MAESSD     K RLHFL RCF SSP V  QKA      NRR PSLRFRF KSSATVP+DAAVP     C D+ S SP+F  PPPP       P ++ EI
Subjt:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI

Query:  V-----ESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPCAAAP-----PSSDRLKPAPKPSTNSPATKFDPVIV
        +     ++IKPS+TRKK+ESTQS  K+E       T +   +    SP L  +K LKK++SHLP AAA      PSSDR     KP TNSP  KFD VIV
Subjt:  V-----ESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPCAAAP-----PSSDRLKPAPKPSTNSPATKFDPVIV

Query:  IVALAMVVLWGRLCAILCTSALFYFGRRRRFK
        IVA+A+VVLWGRLCAILCT+ALFY  R  R K
Subjt:  IVALAMVVLWGRLCAILCTSALFYFGRRRRFK

A0A6J1GBH7 uncharacterized protein LOC1114526501.5e-7067.25Show/hide
Query:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI
        MAE+S+K+ PSK  LHFLLRCFGSSPKV ++K P TGRR+ R+PS RFRF KSSATVP+D AVPEI V CDD ASFSP+FKKPPP P + SRAP VR +I
Subjt:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI

Query:  VESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPC--AAAPPSSDRLKPAPKPSTNSPATKFDPVIVIVALAMVV
        VE IKPSQ  KKTEST+S+     + PAKRTAALLHS+SLPS RL+ QKD KKTVSHL       P SS+R KPA KP  NSPA   D +IVIVA+A+VV
Subjt:  VESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPC--AAAPPSSDRLKPAPKPSTNSPATKFDPVIVIVALAMVV

Query:  LWGRLCAILCTSALFYFGRRRRFKFPEEG
        LWG+LCAILCT+ALFYF RR R +   EG
Subjt:  LWGRLCAILCTSALFYFGRRRRFKFPEEG

A0A6J1IZW6 uncharacterized protein LOC1114814553.8e-4554.22Show/hide
Query:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI
        MAESSD     K RLHFL RCF SSP V  QKA      NRR PSLRFRF K SATVP+DAAVP     C D+ SFSP+F  PPPP P+  +   +    
Subjt:  MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEI

Query:  VESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPCAAA---PPSSDRLKPAPKPSTNSPATKFDPVIVIVALAMV
         ++IK S+TRKK+ESTQS    E++PPAK+T+  LHS          +K LKK++SHLP A A   P +S     + K  TNSP  KFD V VIVA+A+V
Subjt:  VESIKPSQTRKKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPCAAA---PPSSDRLKPAPKPSTNSPATKFDPVIVIVALAMV

Query:  VLWGRLCAILCTSALFYFGRRRRFK
        VLWGRLCAILCT+ALFY  R  R K
Subjt:  VLWGRLCAILCTSALFYFGRRRRFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATCTTCCGATAAAATCCTTCCGTCCAAAAACCGACTCCATTTTCTCCTCCGTTGCTTCGGATCTTCCCCAAAAGTTCACAGCCAGAAGGCTCCGGCGACCGG
CCGACGGAACCGACGGGTTCCGTCGCTCAGGTTCCGATTCAACAAGTCCTCTGCAACTGTGCCGGTCGACGCCGCCGTGCCGGAGATCGCAGTGCTATGTGACGATGACG
CCTCTTTTTCGCCGGACTTCAAGAAACCGCCGCCACCGCCGCCGGTTACGTCCAGAGCTCCGGCCGTCCGAGCCGAGATCGTCGAGTCGATAAAGCCGAGTCAAACTCGG
AAGAAAACAGAGTCAACTCAGTCCGAATCCAAGGCAGAGAGAATTCCTCCGGCGAAAAGAACCGCCGCGTTGTTGCACTCCGTCTCTCTTCCTTCCCCGAGACTAAGCGG
CCAAAAAGATTTGAAAAAAACAGTCTCTCATCTCCCCTGCGCCGCCGCGCCGCCGTCCTCCGACCGGCTGAAACCGGCGCCAAAGCCGTCGACGAATTCTCCGGCCACGA
AATTCGATCCGGTGATTGTGATTGTTGCGCTGGCGATGGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGTCGGCGCTGTTTTACTTCGGCCGCCGGCGGAGG
TTTAAGTTTCCGGAGGAAGGGTTTTACATTGATCCTGATAATGGAAATGCACTTCACTCGATATGGGATGTACATCAGTATCTTACAACTGGAAAAGTGTGCCGGTTAGC
AAATAAATTAAGGAACCAGAGAGACAGCAATATCAAGTTTCAACATGATGATATCTCTGCAAGTGCTCTCAAGGTACTCCAAGTTTATATTCCTAAAATTTTATATAATG
AGACTGTTCATCAGTTGTGGTTTGCCTGCTGGCCTCAAGAAAGAGATGCAAATGATTGGCAAAGCAAGGAGACAAATCTATGGAGTGAGAGTTCACTAGAACCCAGTGAA
ATAACAAATGATGGAGCTATTTTTCCAAATGCTACGACTGTTGGAGAAAGCATGCCTCTTCCCGTACCTAATTCCGATCATGGTATAGTTCTAAATATTGAGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAATCTTCCGATAAAATCCTTCCGTCCAAAAACCGACTCCATTTTCTCCTCCGTTGCTTCGGATCTTCCCCAAAAGTTCACAGCCAGAAGGCTCCGGCGACCGG
CCGACGGAACCGACGGGTTCCGTCGCTCAGGTTCCGATTCAACAAGTCCTCTGCAACTGTGCCGGTCGACGCCGCCGTGCCGGAGATCGCAGTGCTATGTGACGATGACG
CCTCTTTTTCGCCGGACTTCAAGAAACCGCCGCCACCGCCGCCGGTTACGTCCAGAGCTCCGGCCGTCCGAGCCGAGATCGTCGAGTCGATAAAGCCGAGTCAAACTCGG
AAGAAAACAGAGTCAACTCAGTCCGAATCCAAGGCAGAGAGAATTCCTCCGGCGAAAAGAACCGCCGCGTTGTTGCACTCCGTCTCTCTTCCTTCCCCGAGACTAAGCGG
CCAAAAAGATTTGAAAAAAACAGTCTCTCATCTCCCCTGCGCCGCCGCGCCGCCGTCCTCCGACCGGCTGAAACCGGCGCCAAAGCCGTCGACGAATTCTCCGGCCACGA
AATTCGATCCGGTGATTGTGATTGTTGCGCTGGCGATGGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGTCGGCGCTGTTTTACTTCGGCCGCCGGCGGAGG
TTTAAGTTTCCGGAGGAAGGGTTTTACATTGATCCTGATAATGGAAATGCACTTCACTCGATATGGGATGTACATCAGTATCTTACAACTGGAAAAGTGTGCCGGTTAGC
AAATAAATTAAGGAACCAGAGAGACAGCAATATCAAGTTTCAACATGATGATATCTCTGCAAGTGCTCTCAAGGTACTCCAAGTTTATATTCCTAAAATTTTATATAATG
AGACTGTTCATCAGTTGTGGTTTGCCTGCTGGCCTCAAGAAAGAGATGCAAATGATTGGCAAAGCAAGGAGACAAATCTATGGAGTGAGAGTTCACTAGAACCCAGTGAA
ATAACAAATGATGGAGCTATTTTTCCAAATGCTACGACTGTTGGAGAAAGCATGCCTCTTCCCGTACCTAATTCCGATCATGGTATAGTTCTAAATATTGAGCTTTAG
Protein sequenceShow/hide protein sequence
MAESSDKILPSKNRLHFLLRCFGSSPKVHSQKAPATGRRNRRVPSLRFRFNKSSATVPVDAAVPEIAVLCDDDASFSPDFKKPPPPPPVTSRAPAVRAEIVESIKPSQTR
KKTESTQSESKAERIPPAKRTAALLHSVSLPSPRLSGQKDLKKTVSHLPCAAAPPSSDRLKPAPKPSTNSPATKFDPVIVIVALAMVVLWGRLCAILCTSALFYFGRRRR
FKFPEEGFYIDPDNGNALHSIWDVHQYLTTGKVCRLANKLRNQRDSNIKFQHDDISASALKVLQVYIPKILYNETVHQLWFACWPQERDANDWQSKETNLWSESSLEPSE
ITNDGAIFPNATTVGESMPLPVPNSDHGIVLNIEL