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Spg038553 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038553
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionWD repeat-containing protein 91-like protein
Genome locationscaffold12:1176268..1176783
RNA-Seq ExpressionSpg038553
SyntenySpg038553
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042577.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa]9.5e-1738.04Show/hide
Query:  MASRDELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKE
        MAS D   R+F+ + V    QE ++ YHE + Q  V+ +LV+ R   F  T T    KC DW ++LAL +  + ++F L L    M     Y LD+I KE
Subjt:  MASRDELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKE

Query:  QVQIAQHIVEATNRDRD-----------QALSDGFG------SRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLCY
         ++I Q I+ + N+ RD           +  SDGF        + L  D FR V RKV +  TVSALL V+ IELYV +Y LC+
Subjt:  QVQIAQHIVEATNRDRD-----------QALSDGFG------SRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLCY

XP_022157130.1 uncharacterized protein LOC111023927 [Momordica charantia]1.1e-2545.66Show/hide
Query:  ELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSS-LKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQI
        EL+RNF+ L   +  QE+R++YHE+RAQ   + +L+W R FFFAI+ T SS LKC DW MVL L++  + ++FL FL+   M + V + +D+I KEQ +I
Subjt:  ELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSS-LKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQI

Query:  AQHIVEATNR--DRDQAL-----SDG----FGSRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLC
         Q I+ A ++  D D A+     SDG    F  + L+Y +FRIV RK ++  TVSALL V AIELY C +  C
Subjt:  AQHIVEATNR--DRDQAL-----SDG----FGSRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLC

XP_022157172.1 uncharacterized protein LOC111023951 [Momordica charantia]2.4e-2040.72Show/hide
Query:  LQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQIAQ
        L+R+F+ L +    QE  LR++E+RAQ   + +L+W+R FFFA++ T S LKC DW +VL L+++ S ++FLLFL+   M +     +D+I KEQ  I Q
Subjt:  LQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQIAQ

Query:  HIVEATNRDRDQA------LSDGFG-------SRTLDYD-SFRIVLRKVFMGLTVSALLPVIAIELY
         I++A N+D   +      LSDG           TL+YD SFRI  +KV++   +S+L+ V A+ELY
Subjt:  HIVEATNRDRDQA------LSDGFG-------SRTLDYD-SFRIVLRKVFMGLTVSALLPVIAIELY

XP_022157176.1 uncharacterized protein LOC111023953 isoform X2 [Momordica charantia]1.8e-2044.44Show/hide
Query:  ELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQIA
        EL+R F  L      QE+R+RYHE + QK V  +L+  R FFF I+ T SS KC DW ++L+L++L S ++FLLFL  A   +     LD+I KE +++ 
Subjt:  ELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQIA

Query:  QHIVEATNRDR-DQAL-----SD----GFGSRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLC
        Q I+ A N+D  D A+     SD    GF  + L  D FR V RKV++  TV AL+ V AIELYV +Y LC
Subjt:  QHIVEATNRDR-DQAL-----SD----GFGSRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLC

XP_022157182.1 uncharacterized protein LOC111023958 [Momordica charantia]2.7e-2445.35Show/hide
Query:  ELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQIA
        EL+R F+ L      QE+R+RY+ET+ Q  V  +L++ R FFF I+ T SS  C DW ++LAL++L S ++FLLFL    M F   Y LD+I KE  ++ 
Subjt:  ELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQIA

Query:  QHIVEATNRDRDQALS-----------DGFGSRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLC
        Q I+ + N+D D  LS            GF  + L  D FRIV RKV++  TVSALL V AIELYV +Y LC
Subjt:  QHIVEATNRDRDQALS-----------DGFGSRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLC

TrEMBL top hitse value%identityAlignment
A0A5A7TLI0 WD repeat-containing protein 91-like protein4.6e-1738.04Show/hide
Query:  MASRDELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKE
        MAS D   R+F+ + V    QE ++ YHE + Q  V+ +LV+ R   F  T T    KC DW ++LAL +  + ++F L L    M     Y LD+I KE
Subjt:  MASRDELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKE

Query:  QVQIAQHIVEATNRDRD-----------QALSDGFG------SRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLCY
         ++I Q I+ + N+ RD           +  SDGF        + L  D FR V RKV +  TVSALL V+ IELYV +Y LC+
Subjt:  QVQIAQHIVEATNRDRD-----------QALSDGFG------SRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLCY

A0A6J1DS87 uncharacterized protein LOC1110239275.4e-2645.66Show/hide
Query:  ELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSS-LKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQI
        EL+RNF+ L   +  QE+R++YHE+RAQ   + +L+W R FFFAI+ T SS LKC DW MVL L++  + ++FL FL+   M + V + +D+I KEQ +I
Subjt:  ELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSS-LKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQI

Query:  AQHIVEATNR--DRDQAL-----SDG----FGSRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLC
         Q I+ A ++  D D A+     SDG    F  + L+Y +FRIV RK ++  TVSALL V AIELY C +  C
Subjt:  AQHIVEATNR--DRDQAL-----SDG----FGSRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLC

A0A6J1DSQ0 uncharacterized protein LOC1110239581.3e-2445.35Show/hide
Query:  ELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQIA
        EL+R F+ L      QE+R+RY+ET+ Q  V  +L++ R FFF I+ T SS  C DW ++LAL++L S ++FLLFL    M F   Y LD+I KE  ++ 
Subjt:  ELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQIA

Query:  QHIVEATNRDRDQALS-----------DGFGSRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLC
        Q I+ + N+D D  LS            GF  + L  D FRIV RKV++  TVSALL V AIELYV +Y LC
Subjt:  QHIVEATNRDRDQALS-----------DGFGSRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLC

A0A6J1DTV6 uncharacterized protein LOC1110239511.2e-2040.72Show/hide
Query:  LQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQIAQ
        L+R+F+ L +    QE  LR++E+RAQ   + +L+W+R FFFA++ T S LKC DW +VL L+++ S ++FLLFL+   M +     +D+I KEQ  I Q
Subjt:  LQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQIAQ

Query:  HIVEATNRDRDQA------LSDGFG-------SRTLDYD-SFRIVLRKVFMGLTVSALLPVIAIELY
         I++A N+D   +      LSDG           TL+YD SFRI  +KV++   +S+L+ V A+ELY
Subjt:  HIVEATNRDRDQA------LSDGFG-------SRTLDYD-SFRIVLRKVFMGLTVSALLPVIAIELY

A0A6J1DX74 uncharacterized protein LOC111023953 isoform X28.9e-2144.44Show/hide
Query:  ELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQIA
        EL+R F  L      QE+R+RYHE + QK V  +L+  R FFF I+ T SS KC DW ++L+L++L S ++FLLFL  A   +     LD+I KE +++ 
Subjt:  ELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQIA

Query:  QHIVEATNRDR-DQAL-----SD----GFGSRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLC
        Q I+ A N+D  D A+     SD    GF  + L  D FR V RKV++  TV AL+ V AIELYV +Y LC
Subjt:  QHIVEATNRDR-DQAL-----SD----GFGSRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTAGAGATGAGTTGCAGAGGAATTTTGATCACTTAAATGTGGCTATTGGGAATCAAGAAGCCAGACTGCGTTACCATGAAACTCGAGCCCAAAAAACAGTCGT
GTTCTTCCTCGTCTGGCAGCGCGCTTTCTTCTTCGCTATCACTTCCACATATTCGTCCCTCAAGTGTACTGATTGGGGTATGGTTTTGGCTTTGAACATCTTGTCTTCCT
CTCTCTTCTTTCTGCTCTTCCTCAAGGATGCCATTATGTGTTTTTGGGTTCTGTATGTGCTCGACGTGATCCACAAGGAACAAGTCCAAATTGCCCAACACATTGTGGAG
GCCACGAACCGAGATCGTGATCAGGCCTTAAGTGATGGGTTCGGCTCGAGGACACTCGACTATGATTCATTTCGAATTGTGCTCAGGAAAGTTTTCATGGGCCTCACTGT
CTCTGCTCTGCTTCCTGTCATAGCTATTGAGTTATACGTCTGTCAGTACTCGTTGTGCTACTCATCTGGACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTAGAGATGAGTTGCAGAGGAATTTTGATCACTTAAATGTGGCTATTGGGAATCAAGAAGCCAGACTGCGTTACCATGAAACTCGAGCCCAAAAAACAGTCGT
GTTCTTCCTCGTCTGGCAGCGCGCTTTCTTCTTCGCTATCACTTCCACATATTCGTCCCTCAAGTGTACTGATTGGGGTATGGTTTTGGCTTTGAACATCTTGTCTTCCT
CTCTCTTCTTTCTGCTCTTCCTCAAGGATGCCATTATGTGTTTTTGGGTTCTGTATGTGCTCGACGTGATCCACAAGGAACAAGTCCAAATTGCCCAACACATTGTGGAG
GCCACGAACCGAGATCGTGATCAGGCCTTAAGTGATGGGTTCGGCTCGAGGACACTCGACTATGATTCATTTCGAATTGTGCTCAGGAAAGTTTTCATGGGCCTCACTGT
CTCTGCTCTGCTTCCTGTCATAGCTATTGAGTTATACGTCTGTCAGTACTCGTTGTGCTACTCATCTGGACATTGA
Protein sequenceShow/hide protein sequence
MASRDELQRNFDHLNVAIGNQEARLRYHETRAQKTVVFFLVWQRAFFFAITSTYSSLKCTDWGMVLALNILSSSLFFLLFLKDAIMCFWVLYVLDVIHKEQVQIAQHIVE
ATNRDRDQALSDGFGSRTLDYDSFRIVLRKVFMGLTVSALLPVIAIELYVCQYSLCYSSGH