; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038574 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038574
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiondouble-stranded RNA-binding protein 4-like isoform X1
Genome locationscaffold12:2793333..2798098
RNA-Seq ExpressionSpg038574
SyntenySpg038574
Gene Ontology termsGO:0016075 - rRNA catabolic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR011907 - Ribonuclease III
IPR014720 - Double-stranded RNA-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581214.1 Double-stranded RNA-binding protein 4, partial [Cucurbita argyrosperma subsp. sororia]6.1e-13874.86Show/hide
Query:  MVEHSAAVEAAAQQQSSFPPDSA----PAPIPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV
        MVE S  VEA  QQQSSFPPDSA    PA IPVE S+T QLE+D  PPPVL DA+LIPS+A APV SPKPSD  Q F YKNHLHE+TQKSRIPLPVYQT 
Subjt:  MVEHSAAVEAAAQQQSSFPPDSA----PAPIPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV

Query:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF
        +EGSQ  P+YRSTV+VDEV YVSPNTFRNRR AEQDAARIALEYISKK KDDGF+LLHEDLM CK+ILS+YT KM+L+RP Y TKQH+GSVPIFQSTLVF
Subjt:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF

Query:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS
        DGVVYT DISRSKKEAEQLAARAAILS L DAGNPKSQ TLA I+ASKVR HA +QKVKDSHPSQIQ K MPENT +HV  TV+ED+    AIL N V  
Subjt:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS

Query:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR
        GA SE+ PT S   PEF+S K  ASSP  +LPIE VPST EEPVGD ATGSKKRSKN++KA KKLC+E++
Subjt:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR

XP_022935532.1 double-stranded RNA-binding protein 4-like isoform X1 [Cucurbita moschata]5.0e-14075.41Show/hide
Query:  MVEHSAAVEAAAQQQSSFPPDSA----PAPIPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV
        MVE S  VEA  QQQSSFPPDSA    PA IPVE S+T QLE+D  PPPVLPDA+LIPS+A APV SPKPSD  Q F YKNHLHEYTQKSRIPLPVYQT 
Subjt:  MVEHSAAVEAAAQQQSSFPPDSA----PAPIPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV

Query:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF
        +EGSQ  P+YRSTV+VDEV YVSPNTFRNRR AEQDAARIALEYISKK KDDGF+LLHEDLM CK+ILS+YT KM+L+RP Y TKQH+GSVPIFQSTLVF
Subjt:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF

Query:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS
        DGVVYT DISRSKKEAEQLAARAAILS L DAGNPKSQ TLA I+ASKVR HA +QKVKDSHPSQIQ K MP+NT +HV  TV+ED+    AIL N V  
Subjt:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS

Query:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR
        GA SE+ PT S   PEF+S K EASSP  +LPIE VPST EEPVGD ATGSKKRSKN++KA KKLC+E++
Subjt:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR

XP_022984141.1 double-stranded RNA-binding protein 4-like isoform X1 [Cucurbita maxima]1.4e-13774.59Show/hide
Query:  MVEHSAAVEAAAQQQSSFPPDSAPAP----IPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV
        MVE S  VEA  QQQSSFPPDSAPA     IPVE S+T QLE+D  PPPVLP A+LIPS+A APV SPKPSD  Q F YKNHLHEYTQKSRIPLPVYQT 
Subjt:  MVEHSAAVEAAAQQQSSFPPDSAPAP----IPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV

Query:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF
        +EGSQ  P+YRSTV+VDEV YVSPNTFRNRR AEQDAARIALEYISKK KDDGF+LLHEDLM CK+ILS+YT KM+L+RP Y TKQH+GSVPIFQSTLVF
Subjt:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF

Query:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS
        DGVVYT DISRSKKEAEQLAARAAILS L DAGNPKSQ TLA I+ASKVR HA +QKVKDSHPSQIQ K MPENT +HV  TV+ED+    AIL N V  
Subjt:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS

Query:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR
        GA SE+ PT S   PE +S K  ASSP  +LPIE VPST EEPVGD ATG+KKRSKN++KA KKLC+E++
Subjt:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR

XP_022984143.1 double-stranded RNA-binding protein 4-like isoform X3 [Cucurbita maxima]1.4e-13774.59Show/hide
Query:  MVEHSAAVEAAAQQQSSFPPDSAPAP----IPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV
        MVE S  VEA  QQQSSFPPDSAPA     IPVE S+T QLE+D  PPPVLP A+LIPS+A APV SPKPSD  Q F YKNHLHEYTQKSRIPLPVYQT 
Subjt:  MVEHSAAVEAAAQQQSSFPPDSAPAP----IPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV

Query:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF
        +EGSQ  P+YRSTV+VDEV YVSPNTFRNRR AEQDAARIALEYISKK KDDGF+LLHEDLM CK+ILS+YT KM+L+RP Y TKQH+GSVPIFQSTLVF
Subjt:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF

Query:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS
        DGVVYT DISRSKKEAEQLAARAAILS L DAGNPKSQ TLA I+ASKVR HA +QKVKDSHPSQIQ K MPENT +HV  TV+ED+    AIL N V  
Subjt:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS

Query:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR
        GA SE+ PT S   PE +S K  ASSP  +LPIE VPST EEPVGD ATG+KKRSKN++KA KKLC+E++
Subjt:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR

XP_038897078.1 double-stranded RNA-binding protein 8-like isoform X1 [Benincasa hispida]2.6e-14175.54Show/hide
Query:  MVEHSAAVEAAAQQQSSFPPDSAPA----PIPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV
        M+E S  VEA A QQS+FPPDS P     P+PV+ S T Q EAD+ PP VLPDA+L+PS APAPV SP PSD  Q   YKNHLHEYTQKSRI LPVYQT 
Subjt:  MVEHSAAVEAAAQQQSSFPPDSAPA----PIPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV

Query:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF
        NEGS   P+YRSTV+VDEV YVSPNTFRNR+ AEQDAARIA EYISKKTKDDGF+LL EDLM CK+ILS+YTDKM+L+RP Y TK HKGSVP FQSTL F
Subjt:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF

Query:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS
        DGVVYTSD+SRSKKEAEQLAARAAILSL GDA NPKSQ TLA I+ASKVR HATLQKVKDSH SQIQ K MPEN  +HVAMTVDE++  K AIL NGVV 
Subjt:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS

Query:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDH--ATGSKKRSKNRKKAHKKLCVEDR
        GA SEV P TS FRPEF+STK EASSPPV+LPIEFVPSTLEEPVGDH  ATGSK+RSKN++KA KKLC+E++
Subjt:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDH--ATGSKKRSKNRKKAHKKLCVEDR

TrEMBL top hitse value%identityAlignment
A0A6J1CPC5 double-stranded RNA-binding protein 4-like isoform X17.5e-13473.85Show/hide
Query:  MVEHSAAVEAAAQQQSSFPPDSA----PAPIPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV
        MVE+S A+ A A QQ SFPPDSA    PA IPVE S   Q  ADV PP VLPDAV  PSAAPAP+ SP PSDS Q F YK+ LHEY Q+SRIPLPVYQTV
Subjt:  MVEHSAAVEAAAQQQSSFPPDSA----PAPIPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV

Query:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF
         EGS   P+YRSTVLVDEV YVSPNTFRNRRGAE DAARIALEYISK+TKDDGF+LL EDLMFCK+ILS+YT KMNL+RP Y T  H GSVPIFQSTLVF
Subjt:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF

Query:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQ-HVAMTVDEDRRPKYAILVNGVV
        DGVVYT ++SRSKKEAEQLAARAAILSL+GDAGNP+SQ TL  I+ASKVR HATLQKVKDS PSQIQ KPM E +EQ HV MTV+ED   + A L + VV
Subjt:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQ-HVAMTVDEDRRPKYAILVNGVV

Query:  SGATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR
        SGA SE+PPTTS F+PEF   K EAS   V+LPIE+VPSTLEEPVGDHATGS+KRSKNR+KA KKL VE++
Subjt:  SGATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR

A0A6J1F5U3 double-stranded RNA-binding protein 4-like isoform X12.4e-14075.41Show/hide
Query:  MVEHSAAVEAAAQQQSSFPPDSA----PAPIPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV
        MVE S  VEA  QQQSSFPPDSA    PA IPVE S+T QLE+D  PPPVLPDA+LIPS+A APV SPKPSD  Q F YKNHLHEYTQKSRIPLPVYQT 
Subjt:  MVEHSAAVEAAAQQQSSFPPDSA----PAPIPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV

Query:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF
        +EGSQ  P+YRSTV+VDEV YVSPNTFRNRR AEQDAARIALEYISKK KDDGF+LLHEDLM CK+ILS+YT KM+L+RP Y TKQH+GSVPIFQSTLVF
Subjt:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF

Query:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS
        DGVVYT DISRSKKEAEQLAARAAILS L DAGNPKSQ TLA I+ASKVR HA +QKVKDSHPSQIQ K MP+NT +HV  TV+ED+    AIL N V  
Subjt:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS

Query:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR
        GA SE+ PT S   PEF+S K EASSP  +LPIE VPST EEPVGD ATGSKKRSKN++KA KKLC+E++
Subjt:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR

A0A6J1FAT0 double-stranded RNA-binding protein 4-like isoform X28.9e-13573.78Show/hide
Query:  MVEHSAAVEAAAQQQSSFPPDSA----PAPIPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV
        MVE S  VEA  QQQSSFPPDSA    PA IPVE S+T QLE+D  PPPVLPDA+LIPS+A APV SPKPSD  Q F YKNHLHEYTQKSRIPLPVYQT 
Subjt:  MVEHSAAVEAAAQQQSSFPPDSA----PAPIPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV

Query:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF
        +EGSQ  P+YRSTV+VDEV YVSPNTFRNRR AEQDAARIALEYISKK KDDGF+LLHEDLM CK+ILS+YT KM+L+RP Y TKQH+GSVPIFQSTLVF
Subjt:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF

Query:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS
        DGVVYT DISRSKKEAEQLAARAAILS L DAGNPKSQ TLA I+ASKVR HA +QKVKDSHPSQIQ K MP+NT +HV  TV+ED+    AIL N V  
Subjt:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS

Query:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR
                  S   PEF+S K EASSP  +LPIE VPST EEPVGD ATGSKKRSKN++KA KKLC+E++
Subjt:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR

A0A6J1J4E3 double-stranded RNA-binding protein 4-like isoform X16.6e-13874.59Show/hide
Query:  MVEHSAAVEAAAQQQSSFPPDSAPAP----IPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV
        MVE S  VEA  QQQSSFPPDSAPA     IPVE S+T QLE+D  PPPVLP A+LIPS+A APV SPKPSD  Q F YKNHLHEYTQKSRIPLPVYQT 
Subjt:  MVEHSAAVEAAAQQQSSFPPDSAPAP----IPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV

Query:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF
        +EGSQ  P+YRSTV+VDEV YVSPNTFRNRR AEQDAARIALEYISKK KDDGF+LLHEDLM CK+ILS+YT KM+L+RP Y TKQH+GSVPIFQSTLVF
Subjt:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF

Query:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS
        DGVVYT DISRSKKEAEQLAARAAILS L DAGNPKSQ TLA I+ASKVR HA +QKVKDSHPSQIQ K MPENT +HV  TV+ED+    AIL N V  
Subjt:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS

Query:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR
        GA SE+ PT S   PE +S K  ASSP  +LPIE VPST EEPVGD ATG+KKRSKN++KA KKLC+E++
Subjt:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR

A0A6J1J9P9 double-stranded RNA-binding protein 4-like isoform X36.6e-13874.59Show/hide
Query:  MVEHSAAVEAAAQQQSSFPPDSAPAP----IPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV
        MVE S  VEA  QQQSSFPPDSAPA     IPVE S+T QLE+D  PPPVLP A+LIPS+A APV SPKPSD  Q F YKNHLHEYTQKSRIPLPVYQT 
Subjt:  MVEHSAAVEAAAQQQSSFPPDSAPAP----IPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTV

Query:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF
        +EGSQ  P+YRSTV+VDEV YVSPNTFRNRR AEQDAARIALEYISKK KDDGF+LLHEDLM CK+ILS+YT KM+L+RP Y TKQH+GSVPIFQSTLVF
Subjt:  NEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVF

Query:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS
        DGVVYT DISRSKKEAEQLAARAAILS L DAGNPKSQ TLA I+ASKVR HA +QKVKDSHPSQIQ K MPENT +HV  TV+ED+    AIL N V  
Subjt:  DGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVS

Query:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR
        GA SE+ PT S   PE +S K  ASSP  +LPIE VPST EEPVGD ATG+KKRSKN++KA KKLC+E++
Subjt:  GATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIEFVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR

SwissProt top hitse value%identityAlignment
O04492 Double-stranded RNA-binding protein 14.8e-2136.84Show/hide
Query:  FPYKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFIL--LHEDLMFCKTILSDYTDK
        + +K+ L EY QK ++P PVY+ V EG      ++STV++D V Y S   F NR+ AEQ AA +AL  ++K ++    +   +HE  + CK +L +Y  K
Subjt:  FPYKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFIL--LHEDLMFCKTILSDYTDK

Query:  MNLERPTYKTKQHK--GSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLAN
        MN   P Y+ ++ +  G V  F  T+   G+ YT   +R+KK+AE  A R A+L++  D     ++N LAN
Subjt:  MNLERPTYKTKQHK--GSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLAN

Q0DJA3 Double-stranded RNA-binding protein 32.4e-2033.66Show/hide
Query:  AAPAPVPSPKPSDSPQP------------FPYKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISK
        +AP P+P    + SP P            + +K+ L EY QK+ +  P Y T  EG    P ++STV+++   Y S   F NR+ AEQ AA +AL  I K
Subjt:  AAPAPVPSPKPSDSPQP------------FPYKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISK

Query:  KTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTY-KTKQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVA
            +  I   ++   CK +L +Y  KMN   P+Y  TK   G  P F  T+   G+ Y    +R+KK+AE  AAR A+L++ G +    +  T   +V 
Subjt:  KTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTY-KTKQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVA

Query:  SK
         K
Subjt:  SK

Q0IQN6 Double-stranded RNA-binding protein 82.2e-1829.96Show/hide
Query:  DVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALE
        D+ P P+ P+     + +PAP  +         + +K+ L EY QK+ +  P Y T  EG    P ++STV+++   Y S   F NR+ AEQ AA +AL 
Subjt:  DVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALE

Query:  YISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTY-KTKQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGDA-GNPKSQNTL
         I K    +  I   ++   CK +L +Y  KMN   P+Y  TK   G  P F  T+   G+ Y    +R+KK+AE  AAR A+L++ G + G+       
Subjt:  YISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTY-KTKQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGDA-GNPKSQNTL

Query:  ANIVASKVRQHATLQKVKDSHPSQIQR
          +   +V +    + ++   P ++++
Subjt:  ANIVASKVRQHATLQKVKDSHPSQIQR

Q0IV63 Double-stranded RNA-binding protein 72.9e-1831.72Show/hide
Query:  DVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALE
        D+ P P+ P+     + +PAP  +         + +K+ L EY QK+ +  P Y T  EG    P ++STV+++   Y S   F NR+ AEQ AA +AL 
Subjt:  DVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALE

Query:  YISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTY-KTKQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLA
         I K    +  I   ++   CK +L +Y  KMN   P+Y  TK   G  P F  T+   G+ Y    +R+KK+AE  AAR A+L++ G +    +  T  
Subjt:  YISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTY-KTKQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLA

Query:  NIVASKVRQHATLQKVKDSHPSQIQRK
         +V  K R    ++K+    P  ++ K
Subjt:  NIVASKVRQHATLQKVKDSHPSQIQRK

Q6YW64 Double-stranded RNA-binding protein 46.1e-2438.86Show/hide
Query:  APAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIA----LEYISKKTKD-DGFI
        +PAP+P P P  +     YK+ L EY Q++   LP+Y T  +G     +++STV+VD   + S    R  + AEQDAA++A    LE    +T D D F 
Subjt:  APAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIA----LEYISKKTKD-DGFI

Query:  LLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASK
        L+ +D++F K+IL +YT K   ++P Y   + +GSV  + S++ F G  YT   +R+KK+AEQ AARAA+ SLL       +  ++A IV SK
Subjt:  LLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASK

Arabidopsis top hitse value%identityAlignment
AT1G09700.1 dsRNA-binding domain-like superfamily protein3.4e-2236.84Show/hide
Query:  FPYKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFIL--LHEDLMFCKTILSDYTDK
        + +K+ L EY QK ++P PVY+ V EG      ++STV++D V Y S   F NR+ AEQ AA +AL  ++K ++    +   +HE  + CK +L +Y  K
Subjt:  FPYKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFIL--LHEDLMFCKTILSDYTDK

Query:  MNLERPTYKTKQHK--GSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLAN
        MN   P Y+ ++ +  G V  F  T+   G+ YT   +R+KK+AE  A R A+L++  D     ++N LAN
Subjt:  MNLERPTYKTKQHK--GSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLAN

AT2G28380.1 dsRNA-binding protein 26.9e-1532.68Show/hide
Query:  YKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFI--LLHEDLMFCKTILSDYTDKMN
        YKN L E  Q+S   LP Y  + EG   AP++++TV  +   + SP      R AE  AA +AL  +S +         +L E  ++ K +L +   ++ 
Subjt:  YKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFI--LLHEDLMFCKTILSDYTDKMN

Query:  LERPTYKT-KQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSL
           P Y T +   G  P+F  T+   G+ +T D +++KK+AE+ AA AA  SL
Subjt:  LERPTYKT-KQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSL

AT3G26932.1 dsRNA-binding protein 37.7e-1427.08Show/hide
Query:  YKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFIL-LHEDLMFCKTILSDYTDKMNL
        YKN L E  Q+S   LP Y    EG   AP+++++V  +   + SP      R AE  AA +AL  +S K         + ++    K +L +   +  L
Subjt:  YKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFIL-LHEDLMFCKTILSDYTDKMNL

Query:  ERPTY-KTKQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGD------AGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKP
        + P Y   +   G +P F  T+   G+ +  + +++KK+AE+ AA AA  SL          G  K Q  +A ++ S+ R     ++VK   P+Q +R+ 
Subjt:  ERPTY-KTKQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGD------AGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKP

Query:  MPENTEQHVAMTVDE--DRRPKYAILVNGVVSGATSEVPP
        +     Q+   T     D   +    +N   + A+S  PP
Subjt:  MPENTEQHVAMTVDE--DRRPKYAILVNGVVSGATSEVPP

AT3G26932.2 dsRNA-binding protein 37.7e-1427.08Show/hide
Query:  YKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFIL-LHEDLMFCKTILSDYTDKMNL
        YKN L E  Q+S   LP Y    EG   AP+++++V  +   + SP      R AE  AA +AL  +S K         + ++    K +L +   +  L
Subjt:  YKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFIL-LHEDLMFCKTILSDYTDKMNL

Query:  ERPTY-KTKQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGD------AGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKP
        + P Y   +   G +P F  T+   G+ +  + +++KK+AE+ AA AA  SL          G  K Q  +A ++ S+ R     ++VK   P+Q +R+ 
Subjt:  ERPTY-KTKQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGD------AGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKP

Query:  MPENTEQHVAMTVDE--DRRPKYAILVNGVVSGATSEVPP
        +     Q+   T     D   +    +N   + A+S  PP
Subjt:  MPENTEQHVAMTVDE--DRRPKYAILVNGVVSGATSEVPP

AT3G62800.1 double-stranded-RNA-binding protein 49.4e-1229.22Show/hide
Query:  YKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLE
        YK  L  Y  +  + LPVY    EG   AP++R  V      + S   F   + AE  AA+IA+  ++ ++ +        D+ + K +L +   K +  
Subjt:  YKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTVLVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLE

Query:  RPTYKTKQHKGS-VPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQ
         P Y T     S  P F ST+ F G V++ + +++KK AE  AA+ A +S+     N     TL +      RQ      VK S P +I  +P       
Subjt:  RPTYKTKQHKGS-VPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAAILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQ

Query:  HVAMTVDEDRRPKYAILVN
         V MT D    P   I VN
Subjt:  HVAMTVDEDRRPKYAILVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGCATTCCGCTGCAGTTGAAGCAGCTGCTCAACAACAATCTTCATTCCCACCGGACTCAGCTCCGGCTCCTATTCCGGTAGAAAAATCCGATACTCATCAGCT
CGAAGCAGATGTTGATCCTCCACCTGTTTTACCGGACGCAGTTCTAATTCCAAGTGCGGCTCCAGCGCCGGTTCCATCCCCGAAGCCCTCTGATTCGCCTCAACCCTTCC
CATACAAAAATCATTTGCATGAGTACACTCAAAAGTCAAGGATCCCATTACCAGTATATCAGACTGTTAATGAAGGATCCCAGAGTGCACCTCAATATAGGTCAACTGTC
TTGGTTGATGAGGTATGTTATGTGTCTCCTAATACGTTCCGTAATCGAAGGGGAGCTGAACAAGATGCTGCAAGAATTGCCCTTGAGTACATATCAAAAAAGACAAAGGA
TGATGGCTTTATTCTCCTTCATGAGGATTTGATGTTTTGTAAGACGATTTTGTCTGATTATACGGACAAAATGAATTTGGAAAGACCTACGTACAAGACTAAACAACATA
AAGGCTCAGTTCCAATTTTCCAATCCACCTTGGTTTTTGATGGCGTGGTTTATACTAGTGATATTAGTAGGAGTAAGAAAGAGGCAGAACAATTGGCAGCACGTGCTGCT
ATTCTTTCACTTCTTGGAGATGCAGGAAATCCTAAATCACAAAATACTCTTGCCAATATCGTCGCATCTAAAGTCAGACAACATGCGACGTTGCAAAAGGTTAAAGATTC
ACATCCTTCTCAAATTCAACGCAAACCCATGCCTGAAAATACAGAGCAGCATGTGGCAATGACAGTTGATGAAGATAGAAGACCCAAATATGCTATTTTGGTCAACGGAG
TGGTATCTGGTGCAACTTCAGAGGTTCCTCCAACAACGTCTCCTTTTCGACCTGAATTTAAATCAACAAAAACAGAAGCATCCTCCCCTCCAGTGAAACTCCCAATAGAA
TTTGTGCCTTCAACTTTAGAGGAGCCTGTAGGTGATCATGCAACTGGGTCTAAAAAGCGGTCTAAGAACAGGAAAAAGGCACATAAGAAATTGTGTGTGGAGGATCGGTA
A
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGCATTCCGCTGCAGTTGAAGCAGCTGCTCAACAACAATCTTCATTCCCACCGGACTCAGCTCCGGCTCCTATTCCGGTAGAAAAATCCGATACTCATCAGCT
CGAAGCAGATGTTGATCCTCCACCTGTTTTACCGGACGCAGTTCTAATTCCAAGTGCGGCTCCAGCGCCGGTTCCATCCCCGAAGCCCTCTGATTCGCCTCAACCCTTCC
CATACAAAAATCATTTGCATGAGTACACTCAAAAGTCAAGGATCCCATTACCAGTATATCAGACTGTTAATGAAGGATCCCAGAGTGCACCTCAATATAGGTCAACTGTC
TTGGTTGATGAGGTATGTTATGTGTCTCCTAATACGTTCCGTAATCGAAGGGGAGCTGAACAAGATGCTGCAAGAATTGCCCTTGAGTACATATCAAAAAAGACAAAGGA
TGATGGCTTTATTCTCCTTCATGAGGATTTGATGTTTTGTAAGACGATTTTGTCTGATTATACGGACAAAATGAATTTGGAAAGACCTACGTACAAGACTAAACAACATA
AAGGCTCAGTTCCAATTTTCCAATCCACCTTGGTTTTTGATGGCGTGGTTTATACTAGTGATATTAGTAGGAGTAAGAAAGAGGCAGAACAATTGGCAGCACGTGCTGCT
ATTCTTTCACTTCTTGGAGATGCAGGAAATCCTAAATCACAAAATACTCTTGCCAATATCGTCGCATCTAAAGTCAGACAACATGCGACGTTGCAAAAGGTTAAAGATTC
ACATCCTTCTCAAATTCAACGCAAACCCATGCCTGAAAATACAGAGCAGCATGTGGCAATGACAGTTGATGAAGATAGAAGACCCAAATATGCTATTTTGGTCAACGGAG
TGGTATCTGGTGCAACTTCAGAGGTTCCTCCAACAACGTCTCCTTTTCGACCTGAATTTAAATCAACAAAAACAGAAGCATCCTCCCCTCCAGTGAAACTCCCAATAGAA
TTTGTGCCTTCAACTTTAGAGGAGCCTGTAGGTGATCATGCAACTGGGTCTAAAAAGCGGTCTAAGAACAGGAAAAAGGCACATAAGAAATTGTGTGTGGAGGATCGGTA
A
Protein sequenceShow/hide protein sequence
MVEHSAAVEAAAQQQSSFPPDSAPAPIPVEKSDTHQLEADVDPPPVLPDAVLIPSAAPAPVPSPKPSDSPQPFPYKNHLHEYTQKSRIPLPVYQTVNEGSQSAPQYRSTV
LVDEVCYVSPNTFRNRRGAEQDAARIALEYISKKTKDDGFILLHEDLMFCKTILSDYTDKMNLERPTYKTKQHKGSVPIFQSTLVFDGVVYTSDISRSKKEAEQLAARAA
ILSLLGDAGNPKSQNTLANIVASKVRQHATLQKVKDSHPSQIQRKPMPENTEQHVAMTVDEDRRPKYAILVNGVVSGATSEVPPTTSPFRPEFKSTKTEASSPPVKLPIE
FVPSTLEEPVGDHATGSKKRSKNRKKAHKKLCVEDR