CuGenDBv2

Gene ID	Spg038580
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Genome location	scaffold12:7330546..7332328
RNA-Seq Expression	Spg038580
Synteny	Spg038580
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7036506.1 hypothetical protein SDJN02_00124, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.1e-47

82.73

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Query:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKK----KKVRFAEDVKEPRGNGEEYRKEHDEKLATAER
        MSSILSSQGLVIATAMVVSSTALFLAFSKHH I   PTPSKSLLRSC SSDDKKREKNKNKNKK    KKVRFAEDVKEPRGNGEEYRKEHDEK+A AER
Subjt:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKK----KKVRFAEDVKEPRGNGEEYRKEHDEKLATAER

Query:  RRR-----RRSCRNEIPANRVVLYNGILKQRSQRIECSF
        RRR      RSC+N+ PAN++ LYNGILKQRSQRI+CSF
Subjt:  RRR-----RRSCRNEIPANRVVLYNGILKQRSQRIECSF

XP_022948685.1 uncharacterized protein LOC111452283 isoform X1 [Cucurbita moschata]

3.0e-47

83.94

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Query:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKK--KKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRR
        MSSILSSQGLVIATAMVVSSTALFLAFSKHH I   PTPSKSLLRSC SSDDKKREKNKNKNKK  KKVRFAEDVKEPRGNGEEYRKEHDEK+A AERRR
Subjt:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKK--KKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRR

Query:  R-----RRSCRNEIPANRVVLYNGILKQRSQRIECSF
        R      RSC+N+ PAN++ LYNGILKQRSQRI+CSF
Subjt:  R-----RRSCRNEIPANRVVLYNGILKQRSQRIECSF

XP_022955913.1 uncharacterized protein LOC111457756 [Cucurbita moschata]

1.1e-41

79.23

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Query:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKKKKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRRRR
        MSSIL+SQGLVIATAMVVSSTALFLAFSKHH I  NP PSKSLL SCFSSD+K   K K K KKKKVRFAEDVKEP+GNGEEYR+EHDE++A AERR   
Subjt:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKKKKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRRRR

Query:  RSCRNEIPANRVVLYNGILKQRSQRIECSF
          CRNEIPANRV LYNGILKQRS R +CSF
Subjt:  RSCRNEIPANRVVLYNGILKQRSQRIECSF

XP_022998622.1 uncharacterized protein LOC111493207 [Cucurbita maxima]

5.6e-46

83.7

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Query:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKK--KKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRR
        MSSILSSQGLVIATAMVVSSTALFLAFSKHH I   PT SKSLLRSC SSDDKKREKN+NKNKK  KKVRFAEDVKEPRGNGEEYRKEHDEK+A AERRR
Subjt:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKK--KKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRR

Query:  R---RRSCRNEIPANRVVLYNGILKQRSQRIECSF
        R    RSC+N+ PAN++ LYNGILKQRSQRI+CSF
Subjt:  R---RRSCRNEIPANRVVLYNGILKQRSQRIECSF

XP_023525383.1 uncharacterized protein LOC111789004 [Cucurbita pepo subsp. pepo]

3.0e-47

83.94

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Query:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKK--KKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRR
        MSSILSSQGLVIATAMVVSSTALFLAFSKHH I   PTPSKSLLRSC SSDDKKREKNKNKNKK  KKVRFAEDVKEPRGNGEEYRKEHDEK+A AERRR
Subjt:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKK--KKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRR

Query:  R-----RRSCRNEIPANRVVLYNGILKQRSQRIECSF
        R      RSC+N+ PAN++ LYNGILKQRSQRI+CSF
Subjt:  R-----RRSCRNEIPANRVVLYNGILKQRSQRIECSF

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DI03 uncharacterized protein LOC111021094

8.5e-40

78.79

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Query:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKKKKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRRRR
        MSSILSSQGLVIATAMVVS+TALFLAFSK   I   P PS   LRSCFSSDDK + K K K KKKKVRFAEDVKEP GNGEEYRKEHDEKLA AE R RR
Subjt:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKKKKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRRRR

Query:  R--SCRNEIPANRVVLYNGILKQRSQRIECSF
        R  SCRN+IP NRV LYNGILKQRS R+ECSF
Subjt:  R--SCRNEIPANRVVLYNGILKQRSQRIECSF

A0A6J1GAK8 uncharacterized protein LOC111452283 isoform X1

1.4e-47

83.94

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Query:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKK--KKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRR
        MSSILSSQGLVIATAMVVSSTALFLAFSKHH I   PTPSKSLLRSC SSDDKKREKNKNKNKK  KKVRFAEDVKEPRGNGEEYRKEHDEK+A AERRR
Subjt:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKK--KKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRR

Query:  R-----RRSCRNEIPANRVVLYNGILKQRSQRIECSF
        R      RSC+N+ PAN++ LYNGILKQRSQRI+CSF
Subjt:  R-----RRSCRNEIPANRVVLYNGILKQRSQRIECSF

A0A6J1GVB7 uncharacterized protein LOC111457756

5.3e-42

79.23

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Query:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKKKKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRRRR
        MSSIL+SQGLVIATAMVVSSTALFLAFSKHH I  NP PSKSLL SCFSSD+K   K K K KKKKVRFAEDVKEP+GNGEEYR+EHDE++A AERR   
Subjt:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKKKKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRRRR

Query:  RSCRNEIPANRVVLYNGILKQRSQRIECSF
          CRNEIPANRV LYNGILKQRS R +CSF
Subjt:  RSCRNEIPANRVVLYNGILKQRSQRIECSF

A0A6J1IWF1 uncharacterized protein LOC111479184

1.1e-39

75.94

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Query:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKKKKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRRRR
        MSSIL+SQGLVIATAMVVSSTALFLAFSKHH I  NP PSK+LL SCFSSD +K    K K KKKKVRFAEDVKEP+GNGEEYR+EHDE++  AERRR  
Subjt:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKKKKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRRRR

Query:  RS---CRNEIPANRVVLYNGILKQRSQRIECSF
         S   CRNEIPANRV LYNG+LKQRS R +CSF
Subjt:  RS---CRNEIPANRVVLYNGILKQRSQRIECSF

A0A6J1K8H4 uncharacterized protein LOC111493207

2.7e-46

83.7

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Query:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKK--KKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRR
        MSSILSSQGLVIATAMVVSSTALFLAFSKHH I   PT SKSLLRSC SSDDKKREKN+NKNKK  KKVRFAEDVKEPRGNGEEYRKEHDEK+A AERRR
Subjt:  MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKK--KKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRR

Query:  R---RRSCRNEIPANRVVLYNGILKQRSQRIECSF
        R    RSC+N+ PAN++ LYNGILKQRSQRI+CSF
Subjt:  R---RRSCRNEIPANRVVLYNGILKQRSQRIECSF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G52565.1 unknown protein

3.1e-26

52.99

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Query:  MSSILS-SQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKKKKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRRR
        M+ ILS S G+VIATAMV SSTALFLA S+    + N T  + +LRSC SS++KK+++   KNKKKKV+FAE+VKE +GNGEEYRK+   ++   +  + 
Subjt:  MSSILS-SQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKKKKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRRR

Query:  RRS---CRNEIPANRVVLYNGILKQRSQRIECSF
         ++   CRN++PANR+ LYNGIL+ R  RI+CS+
Subjt:  RRS---CRNEIPANRVVLYNGILKQRSQRIECSF

AT3G15760.1 unknown protein

9.4e-15

42.96

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Query:  SSQGLVIATAMVVSSTALFLAFSKH-HNINNNP----TPSKSLLRSCFSSDDKKREKNKNKNKKKKVRFAEDVKEPRGNGEEYRKEHDEKLA----TAER
        S+  +VIATAMV SSTALFLA ++  H  + NP       + +LRSC SS++ K    K   K KKVRFA++VK+ +GNGEEYR+    + +      + 
Subjt:  SSQGLVIATAMVVSSTALFLAFSKH-HNINNNP----TPSKSLLRSCFSSDDKKREKNKNKNKKKKVRFAEDVKEPRGNGEEYRKEHDEKLA----TAER

Query:  RRRRRSCR-NEIPANRVVLYNGILKQRSQRIECSF
         +    CR + +PANR+ LYNGIL+ R  R++ S+
Subjt:  RRRRRSCR-NEIPANRVVLYNGILKQRSQRIECSF

Sequences

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CDS sequence

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ATGTCTTCCATTCTGAGCTCTCAAGGTCTGGTCATTGCCACTGCCATGGTCGTCTCCTCCACTGCTCTCTTTCTCGCCTTCTCCAAGCACCACAACATCAACAATAATCC
AACTCCCTCCAAATCCCTTCTGCGTTCTTGCTTCTCTTCTGATGATAAAAAGAGGGAGAAGAACAAGAACAAGAACAAAAAGAAGAAGGTGAGATTTGCAGAAGATGTGA
AGGAGCCAAGAGGAAACGGAGAAGAATACAGAAAGGAGCACGATGAGAAGTTGGCTACGGCGGAAAGAAGAAGAAGAAGAAGAAGCTGTAGAAATGAAATTCCTGCAAAT
CGAGTCGTTTTGTACAATGGAATTCTTAAACAGCGATCGCAGAGGATCGAATGTTCATTTTAA

mRNA sequence

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Protein sequence

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MSSILSSQGLVIATAMVVSSTALFLAFSKHHNINNNPTPSKSLLRSCFSSDDKKREKNKNKNKKKKVRFAEDVKEPRGNGEEYRKEHDEKLATAERRRRRRSCRNEIPAN
RVVLYNGILKQRSQRIECSF

Spg038580 (gene) of Sponge gourd (cylindrica) v1 genome