; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038581 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038581
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionU11/U12 small nuclear ribonucleoprotein 25 kDa protein, putative
Genome locationscaffold12:6846632..6848769
RNA-Seq ExpressionSpg038581
SyntenySpg038581
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005689 - U12-type spliceosomal complex (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR029071 - Ubiquitin-like domain superfamily
IPR039690 - U11/U12 small nuclear ribonucleoprotein 25kDa protein
IPR040610 - SNRNP25, ubiquitin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153470.1 uncharacterized protein LOC111020973 isoform X1 [Momordica charantia]7.3e-10881.33Show/hide
Query:  MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKI
        M RIGG RER+KIGNLWRFNRFID RC APPTLD D DVDAL R PYRLLPR DLID+FVLKLDGSVFGVRV RNGTVA+LKR IEEVF SP G EHCKI
Subjt:  MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKI

Query:  TWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNY-EVHGEGSNQEEE
        TWSLVWGHFCLCYEG+ LIDDKACIRV GIKDGDQLQFIRHM+I+CLP+KRDRK+QTVSC+TVLFL  ESK VE+NQLA  DDP+ Y EVH +GSNQ EE
Subjt:  TWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNY-EVHGEGSNQEEE

Query:  IPMAGFQLANFFRGRLLYSRIWGFFKSASECRNRPSGFCIT
        +P+ GF LANFFRGR LYSRIWGF KSASE RNRPSGF IT
Subjt:  IPMAGFQLANFFRGRLLYSRIWGFFKSASECRNRPSGFCIT

XP_022948349.1 uncharacterized protein LOC111452053 [Cucurbita moschata]2.4e-11485.48Show/hide
Query:  MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKI
        MRRIGG RER+KIGNLWRFNRFIDNRC AP TLD D DVDALRRRPYRLLPR +LID+FVLKLDGSVFGVRV RNGTVADLK+ IEEVFDSP  SEHCKI
Subjt:  MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKI

Query:  TWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEEI
        TWSLVWGHFCLCYEGEKLIDDKA IRV+GIKDGDQLQFIRHM+INCLPMKRDRKNQ V CKTVLFL AESKS+E NQ+A Q DP NYEVH +GSNQ EEI
Subjt:  TWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEEI

Query:  PMAGFQLANFFRGRLLYSRIWGFFKSASECRNRP-SGFCIT
        PMAGFQLAN FRGR+LYS+IWGFF+SASE RNRP SGFCIT
Subjt:  PMAGFQLANFFRGRLLYSRIWGFFKSASECRNRP-SGFCIT

XP_022998358.1 uncharacterized protein LOC111493024 [Cucurbita maxima]6.2e-11585.89Show/hide
Query:  MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKI
        MRRIGG RER+KIGNLWRFNRFIDNRC AP TLD D DVDALRRRPYRLLPR +LID+FVLKLDGSVFGVRV RNGTVADLK+ IEEVFDSP  SEHCKI
Subjt:  MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKI

Query:  TWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEEI
        TWSLVWGHFCLCYEGEKLIDDKA IRV+GIKDGDQLQFIRHM+INCLPMKRDRKNQ V CKTVLFL AESKS+E NQ+A Q DP NYEVH +GSNQ EEI
Subjt:  TWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEEI

Query:  PMAGFQLANFFRGRLLYSRIWGFFKSASECRNRP-SGFCIT
        PMAGFQLAN FRGRLLYS+IWGFF+SASE RNRP SGFCIT
Subjt:  PMAGFQLANFFRGRLLYSRIWGFFKSASECRNRP-SGFCIT

XP_023525469.1 uncharacterized protein LOC111789062 [Cucurbita pepo subsp. pepo]5.2e-11485.06Show/hide
Query:  MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKI
        MRRIGG RER+KIGNLWRFNRFIDNRC AP TLD D DVDALRRRPYRLLPR +LID+FVLKLDGSVFGVRV RNGTVADLK+ IEEVFDSP  SEHCKI
Subjt:  MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKI

Query:  TWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEEI
        TWSLVWGHFCLCYEGEKLIDDKA IRV+GIKDGDQLQF+RHM+INCLPMKRDRKNQ V CKTVLFL AE KS+E NQ+A Q DP NYEVH +GSNQ EEI
Subjt:  TWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEEI

Query:  PMAGFQLANFFRGRLLYSRIWGFFKSASECRNRPS-GFCIT
        PMAGFQLAN FRGRLLYS+IWGFF+SASE RNRPS GFCIT
Subjt:  PMAGFQLANFFRGRLLYSRIWGFFKSASECRNRPS-GFCIT

XP_038904269.1 uncharacterized protein LOC120090621 isoform X1 [Benincasa hispida]3.4e-10579.92Show/hide
Query:  MRRIGGHRERTKIGNLWRFNRFIDNRCFA-PPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCK
        M  I  H ERTKIGNLWRF+RF+D RC A PPTLD DAD  AL RRPYRLLPR DLID+FVLKLDGSVFG+RV RN TVADLKR IEEVFDSP GSEHCK
Subjt:  MRRIGGHRERTKIGNLWRFNRFIDNRCFA-PPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCK

Query:  ITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEE
        ITWSL+WGHFCLCYEGEKLIDDK CIRV GIKDGDQLQF+RHM+INCLP+KRD KNQ+VSCKT+L LS ESKSVEENQ A QDD +NY+VH  GSNQEE 
Subjt:  ITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEE

Query:  IPM--AGFQLANFFRGRLLYSRIWGFFKSASECRNRP-SGFCIT
        + M  AGFQLANFFRGR+LYSRIWGF KSASE RNRP SGF IT
Subjt:  IPM--AGFQLANFFRGRLLYSRIWGFFKSASECRNRP-SGFCIT

TrEMBL top hitse value%identityAlignment
A0A0A0KTJ1 Ubiquitin_4 domain-containing protein2.8e-9776.86Show/hide
Query:  ERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGH
        +RTKI NLWRF RFID RCFAPPTLD D D DAL RRPYRLLPR D ID+FVLKLDGSVFG+RV RN TVADLKR IE+VFDSP GSEH KITWSL+WGH
Subjt:  ERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGH

Query:  FCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEE--EIPMAGFQ
        FCLCYEGEKLIDDK CI+  GIKDGDQLQFIRHM+INCL MK+DRKNQTV CK +LFLS ESK+VEENQ   QDD K+Y+VH + SN+EE   +  AGFQ
Subjt:  FCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEE--EIPMAGFQ

Query:  LANFFRGRLLYSRIWGFFKSASECRNRPS
        LAN F+GR+LYSRIWGF KSASE RNR S
Subjt:  LANFFRGRLLYSRIWGFFKSASECRNRPS

A0A1S3BY00 uncharacterized protein LOC103494657 isoform X14.3e-9877.06Show/hide
Query:  HRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVW
        H +RTKI NLWRF RFID RCFAPPTLD + D DAL RRPYRLLPR DLID+FVLKLDGSVFGVRV RN TVADLKR IEEVFDSP GSEH KITWSL+W
Subjt:  HRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVW

Query:  GHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEEIPM--AG
        GHFCLCYEGEKL DDKACIR   IKDGDQLQFIRHM+INCL MK+DRKNQTV CKT+LF S ESK+VEENQ   +DD K+Y+VH + SNQEE   M  A 
Subjt:  GHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEEIPM--AG

Query:  FQLANFFRGRLLYSRIWGFFKSASECRNRPS
        FQL+NFF+GR+LYSR+WGF KSASE RNR S
Subjt:  FQLANFFRGRLLYSRIWGFFKSASECRNRPS

A0A6J1DGY1 uncharacterized protein LOC111020973 isoform X13.6e-10881.33Show/hide
Query:  MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKI
        M RIGG RER+KIGNLWRFNRFID RC APPTLD D DVDAL R PYRLLPR DLID+FVLKLDGSVFGVRV RNGTVA+LKR IEEVF SP G EHCKI
Subjt:  MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKI

Query:  TWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNY-EVHGEGSNQEEE
        TWSLVWGHFCLCYEG+ LIDDKACIRV GIKDGDQLQFIRHM+I+CLP+KRDRK+QTVSC+TVLFL  ESK VE+NQLA  DDP+ Y EVH +GSNQ EE
Subjt:  TWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNY-EVHGEGSNQEEE

Query:  IPMAGFQLANFFRGRLLYSRIWGFFKSASECRNRPSGFCIT
        +P+ GF LANFFRGR LYSRIWGF KSASE RNRPSGF IT
Subjt:  IPMAGFQLANFFRGRLLYSRIWGFFKSASECRNRPSGFCIT

A0A6J1G9M5 uncharacterized protein LOC1114520531.1e-11485.48Show/hide
Query:  MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKI
        MRRIGG RER+KIGNLWRFNRFIDNRC AP TLD D DVDALRRRPYRLLPR +LID+FVLKLDGSVFGVRV RNGTVADLK+ IEEVFDSP  SEHCKI
Subjt:  MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKI

Query:  TWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEEI
        TWSLVWGHFCLCYEGEKLIDDKA IRV+GIKDGDQLQFIRHM+INCLPMKRDRKNQ V CKTVLFL AESKS+E NQ+A Q DP NYEVH +GSNQ EEI
Subjt:  TWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEEI

Query:  PMAGFQLANFFRGRLLYSRIWGFFKSASECRNRP-SGFCIT
        PMAGFQLAN FRGR+LYS+IWGFF+SASE RNRP SGFCIT
Subjt:  PMAGFQLANFFRGRLLYSRIWGFFKSASECRNRP-SGFCIT

A0A6J1KGI2 uncharacterized protein LOC1114930243.0e-11585.89Show/hide
Query:  MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKI
        MRRIGG RER+KIGNLWRFNRFIDNRC AP TLD D DVDALRRRPYRLLPR +LID+FVLKLDGSVFGVRV RNGTVADLK+ IEEVFDSP  SEHCKI
Subjt:  MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKI

Query:  TWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEEI
        TWSLVWGHFCLCYEGEKLIDDKA IRV+GIKDGDQLQFIRHM+INCLPMKRDRKNQ V CKTVLFL AESKS+E NQ+A Q DP NYEVH +GSNQ EEI
Subjt:  TWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEEI

Query:  PMAGFQLANFFRGRLLYSRIWGFFKSASECRNRP-SGFCIT
        PMAGFQLAN FRGRLLYS+IWGFF+SASE RNRP SGFCIT
Subjt:  PMAGFQLANFFRGRLLYSRIWGFFKSASECRNRP-SGFCIT

SwissProt top hitse value%identityAlignment
Q3ZBQ4 U11/U12 small nuclear ribonucleoprotein 25 kDa protein8.1e-0937.93Show/hide
Query:  VLKLDGSVFGVRVPRNGTVADLKRTIEEVF----DSPEGSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHM
        V K+DG V  V V +N TV DLK+ I+       +   G +H  I+WS VW  + L   GEKL +D+  +R  GI++ D++ FI+ +
Subjt:  VLKLDGSVFGVRVPRNGTVADLKRTIEEVF----DSPEGSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHM

Q84WS8 U11/U12 small nuclear ribonucleoprotein 25 kDa protein8.7e-1132.8Show/hide
Query:  LPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSE--HCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCL
        L +   + + V+KLDGS   V V  + T+ DLK  I++  +  E +   H  I+W  VW +FCL    EKL+DD A ++ +GI++  Q+ F+ ++     
Subjt:  LPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSE--HCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCL

Query:  PMKRDRKNQTVSCKTVLFLSAESKS
         MK+ R   +   K  LF S    S
Subjt:  PMKRDRKNQTVSCKTVLFLSAESKS

Q8VIK1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein6.2e-0937.93Show/hide
Query:  VLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPE----GSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHM
        V K+DG V  V V +N TV DLK+ I+      +    G +H  I+WS VW  + L   GEKL +D+  +R  GI++ D++ FI+ +
Subjt:  VLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPE----GSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHM

Q9BV90 U11/U12 small nuclear ribonucleoprotein 25 kDa protein2.4e-0836.78Show/hide
Query:  VLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPE----GSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHM
        V K+DG V  V V ++ TV DLK+ I+      +    G +H  I+WS VW  + L   GEKL +D+  +R  GI++ D++ FI+ +
Subjt:  VLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPE----GSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHM

Arabidopsis top hitse value%identityAlignment
AT1G80060.1 Ubiquitin-like superfamily protein1.0e-3540.4Show/hide
Query:  RRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHM
        RR  Y  LP    I + V+KL+GS+F V V ++ +VA+LKR +E+VF       H  I+WS VWGHFCLCY  ++L++DK  IR LG+ DGDQL F+RH+
Subjt:  RRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHM

Query:  TINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGE-GSNQEEEIPMAGFQLANFFRGRLLYSRIWGFFKSASECRNRPSGFCI
        +I+  PM  ++++++ SCK  L L   S  V E Q+  Q+     +V  +     ++E+P A  +L N  +G L Y+  WG  +   ECR+ PS F +
Subjt:  TINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGE-GSNQEEEIPMAGFQLANFFRGRLLYSRIWGFFKSASECRNRPSGFCI

AT3G07860.1 Ubiquitin-like superfamily protein6.2e-1232.8Show/hide
Query:  LPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSE--HCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCL
        L +   + + V+KLDGS   V V  + T+ DLK  I++  +  E +   H  I+W  VW +FCL    EKL+DD A ++ +GI++  Q+ F+ ++     
Subjt:  LPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSE--HCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCL

Query:  PMKRDRKNQTVSCKTVLFLSAESKS
         MK+ R   +   K  LF S    S
Subjt:  PMKRDRKNQTVSCKTVLFLSAESKS

AT4G32270.1 Ubiquitin-like superfamily protein4.3e-2137.33Show/hide
Query:  VDALRRR---PYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQ
        +D L RR    Y  +P  + I + VLKLDGS FG++V +  TV +LK  +E  F     S   KI+W  VWG FCL YE ++LI++   +   GIKDGDQ
Subjt:  VDALRRR---PYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQ

Query:  LQFIRHMTINCLPMKRDRKN--QTVSCKTVLFLSAESKSVEENQLAEQDD
        L+FIRH++  C+ M + +    +  S K +   S   ++ ++N + E ++
Subjt:  LQFIRHMTINCLPMKRDRKN--QTVSCKTVLFLSAESKSVEENQLAEQDD

AT4G32270.2 Ubiquitin-like superfamily protein1.7e-1737.69Show/hide
Query:  IDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKN
        I + VLKLDGS F   V +  TV +LK  +E  F     S   KI+W  VWG FCL YE ++LI++   +   GIKDGDQL+FIRH++  C+ M + +  
Subjt:  IDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKN

Query:  --QTVSCKTVLFLSAESKSVEENQLAEQDD
          +  S K +   S   ++ ++N + E ++
Subjt:  --QTVSCKTVLFLSAESKSVEENQLAEQDD

AT5G25340.1 Ubiquitin-like superfamily protein4.7e-2042.86Show/hide
Query:  YRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINC
        Y  LP  + I + VLKLDGS F V V  + TV DLK  IE  F         KI+WS VWGHFCLC+ G+KLI D  CI   G+KDGD+++F  H++ N 
Subjt:  YRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINC

Query:  LPMK-RDRKNQTVSCKTVLFLSAESKSVEE--NQLAEQDD
        +  K   RK++  + + VL      K  +E  N++ E DD
Subjt:  LPMK-RDRKNQTVSCKTVLFLSAESKSVEE--NQLAEQDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAAGGATTGGCGGCCACAGAGAGAGGACCAAGATCGGTAACTTATGGCGTTTCAATCGCTTCATTGATAACCGGTGTTTCGCTCCGCCTACGCTCGACGCCGATGC
TGACGTTGACGCTCTCAGGCGGCGCCCTTATCGGTTGCTTCCGAGGCCGGACCTCATCGATATCTTCGTCCTCAAGCTCGACGGCTCTGTATTTGGTGTTCGTGTACCGC
GCAATGGTACGGTTGCAGATCTCAAACGAACGATAGAGGAAGTTTTTGATTCGCCCGAGGGGAGTGAGCATTGCAAGATTACATGGTCACTTGTCTGGGGACATTTCTGC
TTATGTTATGAAGGCGAAAAGCTTATTGATGACAAGGCATGCATTAGAGTTCTTGGCATTAAAGATGGTGATCAGCTTCAGTTTATTAGGCATATGACAATCAACTGTCT
ACCAATGAAGAGAGATAGGAAGAACCAAACTGTTTCTTGCAAAACAGTATTGTTTCTGTCAGCAGAATCAAAATCTGTCGAAGAAAATCAACTGGCTGAGCAAGATGATC
CCAAGAATTATGAAGTTCACGGGGAAGGCTCGAATCAGGAGGAGGAGATTCCTATGGCTGGATTTCAGCTAGCAAATTTCTTCAGAGGACGGCTATTGTATTCCAGGATT
TGGGGGTTTTTCAAGAGTGCATCAGAATGCAGGAATAGGCCTTCTGGATTCTGCATTACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAAGGATTGGCGGCCACAGAGAGAGGACCAAGATCGGTAACTTATGGCGTTTCAATCGCTTCATTGATAACCGGTGTTTCGCTCCGCCTACGCTCGACGCCGATGC
TGACGTTGACGCTCTCAGGCGGCGCCCTTATCGGTTGCTTCCGAGGCCGGACCTCATCGATATCTTCGTCCTCAAGCTCGACGGCTCTGTATTTGGTGTTCGTGTACCGC
GCAATGGTACGGTTGCAGATCTCAAACGAACGATAGAGGAAGTTTTTGATTCGCCCGAGGGGAGTGAGCATTGCAAGATTACATGGTCACTTGTCTGGGGACATTTCTGC
TTATGTTATGAAGGCGAAAAGCTTATTGATGACAAGGCATGCATTAGAGTTCTTGGCATTAAAGATGGTGATCAGCTTCAGTTTATTAGGCATATGACAATCAACTGTCT
ACCAATGAAGAGAGATAGGAAGAACCAAACTGTTTCTTGCAAAACAGTATTGTTTCTGTCAGCAGAATCAAAATCTGTCGAAGAAAATCAACTGGCTGAGCAAGATGATC
CCAAGAATTATGAAGTTCACGGGGAAGGCTCGAATCAGGAGGAGGAGATTCCTATGGCTGGATTTCAGCTAGCAAATTTCTTCAGAGGACGGCTATTGTATTCCAGGATT
TGGGGGTTTTTCAAGAGTGCATCAGAATGCAGGAATAGGCCTTCTGGATTCTGCATTACCTGA
Protein sequenceShow/hide protein sequence
MRRIGGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVPRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFC
LCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKSVEENQLAEQDDPKNYEVHGEGSNQEEEIPMAGFQLANFFRGRLLYSRI
WGFFKSASECRNRPSGFCIT