; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038585 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038585
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTATA-binding protein-associated factor 2N-like
Genome locationscaffold12:7438552..7440137
RNA-Seq ExpressionSpg038585
SyntenySpg038585
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036500.1 hypothetical protein SDJN02_00117 [Cucurbita argyrosperma subsp. argyrosperma]4.9e-8493.87Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
        MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGG DFG L+NGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD

Query:  FDMSRSRGMSPFGFANP-----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
        FDM RSRG+SPFGFANP     ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
Subjt:  FDMSRSRGMSPFGFANP-----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY

XP_022948549.1 periodic tryptophan protein 2 isoform X2 [Cucurbita moschata]3.7e-8494.44Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
        MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGG DFG L+NGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD

Query:  FDMSRSRGMSPFGFANP----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
        FDM RSRG+SPFGFANP    ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
Subjt:  FDMSRSRGMSPFGFANP----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY

XP_022948551.1 TATA-binding protein-associated factor 2N isoform X3 [Cucurbita moschata]3.7e-8494.44Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
        MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGG DFG L+NGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD

Query:  FDMSRSRGMSPFGFANP----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
        FDM RSRG+SPFGFANP    ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
Subjt:  FDMSRSRGMSPFGFANP----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY

XP_022998918.1 TATA-binding protein-associated factor 2N isoform X3 [Cucurbita maxima]1.1e-8393.83Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
        MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGG DFG L+NGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD

Query:  FDMSRSRGMSPFGFANP----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
        FDM RSRG+SPFGFANP    ARTG SAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
Subjt:  FDMSRSRGMSPFGFANP----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY

XP_023525213.1 transcription initiation factor TFIID subunit 15b-like [Cucurbita pepo subsp. pepo]4.9e-8493.87Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
        MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGG DFG L+NGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD

Query:  FDMSRSRGMSPFGFANP-----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
        FDM RSRG+SPFGFANP     ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
Subjt:  FDMSRSRGMSPFGFANP-----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY

TrEMBL top hitse value%identityAlignment
A0A6J1DJ84 TATA-binding protein-associated factor 2N-like2.4e-7386.42Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
        MSRPGDWNCRSCQHLNFQRRD CQRCGDPKS  GG DFGGLMNGGGRGGS FGYGGSDVRPGDWYC++GNCGAHNFASRSSCFKCGAFKDDM    GGFD
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD

Query:  FDMSRSRGMSPFGFAN----PARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
        FD+ RSRG S FGFAN      RTGASAWKSGDWICARSGCNEHNFASRMECFRCSAP+DSY
Subjt:  FDMSRSRGMSPFGFAN----PARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY

A0A6J1G9I4 TATA-binding protein-associated factor 2N isoform X31.8e-8494.44Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
        MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGG DFG L+NGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD

Query:  FDMSRSRGMSPFGFANP----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
        FDM RSRG+SPFGFANP    ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
Subjt:  FDMSRSRGMSPFGFANP----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY

A0A6J1GA82 periodic tryptophan protein 2 isoform X21.8e-8494.44Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
        MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGG DFG L+NGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD

Query:  FDMSRSRGMSPFGFANP----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
        FDM RSRG+SPFGFANP    ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
Subjt:  FDMSRSRGMSPFGFANP----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY

A0A6J1K9C2 periodic tryptophan protein 2 isoform X25.2e-8493.83Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
        MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGG DFG L+NGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD

Query:  FDMSRSRGMSPFGFANP----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
        FDM RSRG+SPFGFANP    ARTG SAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
Subjt:  FDMSRSRGMSPFGFANP----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY

A0A6J1KI51 TATA-binding protein-associated factor 2N isoform X35.2e-8493.83Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
        MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGG DFG L+NGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFD

Query:  FDMSRSRGMSPFGFANP----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
        FDM RSRG+SPFGFANP    ARTG SAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY
Subjt:  FDMSRSRGMSPFGFANP----ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY

SwissProt top hitse value%identityAlignment
O13801 Uncharacterized RNA-binding protein C17H9.04c5.5e-0629.03Show/hide
Query:  RPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFDFD
        RPGDWNC  C   NFQRR  C RC  P     G        G       F YG           S GN  +H  A+               +       D
Subjt:  RPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFDFD

Query:  MSRSRGMSPFGFANPART--GASAWKSGDWICARSGCNEHNFASRMECFRCSAPK
        +    G +     + +R+  G   +++GDW C   GC  HNFA  + C RC A +
Subjt:  MSRSRGMSPFGFANPART--GASAWKSGDWICARSGCNEHNFASRMECFRCSAPK

Arabidopsis top hitse value%identityAlignment
AT1G50300.1 TBP-associated factor 156.9e-0435.71Show/hide
Query:  GDWNC--RSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVR-----------PGDWYCSIGNCGAHNFASRSSCFKCGAFK
        GDW C   SC ++NF  R +C RCG  +  G  G  G +  G GRG  G   GG+  +           P DW C +  CG  N+A R  C  C   K
Subjt:  GDWNC--RSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVR-----------PGDWYCSIGNCGAHNFASRSSCFKCGAFK

AT2G17975.1 zinc finger (Ran-binding) family protein3.5e-0826.39Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGG-------GGDFGGLMNGGGRGGSGFGYGGS---------------DVRPGDWYCSIGNCGAHNFAS
        + R GDW C  C + N+  R+ C++CG  K           G      ++   RG       GS               + R GDW C    CG HN++S
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGG-------GGDFGGLMNGGGRGGSGFGYGGS---------------DVRPGDWYCSIGNCGAHNFAS

Query:  RSSCFKCGAF------KDDMSAAAGGFDFDMSRSR-----------------GMS---------PFGFANPART------GASAWKSGDWICARSGCNEH
        R  C KC            +++ A   ++D  R                   GMS         P  F     T      G   W+ GDW+C  + C  H
Subjt:  RSSCFKCGAF------KDDMSAAAGGFDFDMSRSR-----------------GMS---------PFGFANPART------GASAWKSGDWICARSGCNEH

Query:  NFASRMECFRCSAPKD
        N+ASR EC RC   +D
Subjt:  NFASRMECFRCSAPKD

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein1.1e-2840.13Show/hide
Query:  GDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFDFDMS
        GDW C +CQH NF++R+ CQ+CG PK       FGG+        S + Y  ++V  GDWYC   NCG+HN+ASR+SC++CG  K + +           
Subjt:  GDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFDFDMS

Query:  RSRGMSPFGFANPARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKD
        +  G     + N        WK+GDW+C R GC  HN+ASR ECF+C   +D
Subjt:  RSRGMSPFGFANPARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKD

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein1.1e-5465.48Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGG---DFGGLMNGGGRGGSGFGY-GGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAA
        MSRPGDWNCRSC HLNFQRRD CQRCGD +SG GG    DFG   N GGR  S FG+  GSDVRPGDWYC++GNCG HNFASRS+CFKCG FKD+  A  
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGG---DFGGLMNGGGRGGSGFGY-GGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAA

Query:  GG--------FDFDMSRSRGMSPFGFANPARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKD
        GG        FD D+ RSR         P   G S+WKSGDWIC R GCNEHNFASRMECFRC+AP+D
Subjt:  GG--------FDFDMSRSRGMSPFGFANPARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKD

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein7.1e-4960.61Show/hide
Query:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRG-GSGFGYG-GSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMS-----
        M+RPGDWNCR C HLNFQRRD CQRC +P+ GG   D   L   GGR   S FG+  G DVRPGDWYC++G+CG HNFA+RSSCFKCGA KD+ S     
Subjt:  MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRG-GSGFGYG-GSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMS-----

Query:  AAAGGFDFDMSRSRGMSPFGFANP--ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKD
        A  G  D ++   RG+  FG ++     TG S WKSGDWIC RSGCNEHNFASR ECFRC+APK+
Subjt:  AAAGGFDFDMSRSRGMSPFGFANP--ARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCGACCGGGAGACTGGAACTGCAGGTCGTGCCAGCACCTGAACTTCCAGAGGAGGGACATGTGCCAGCGCTGCGGCGACCCCAAGTCCGGCGGCGGCGGCGGCGA
CTTCGGCGGTCTGATGAACGGCGGCGGAAGGGGCGGGTCTGGGTTCGGGTACGGCGGCTCCGATGTGAGGCCCGGCGACTGGTACTGCAGCATAGGAAACTGTGGAGCCC
ACAATTTCGCAAGCCGGTCGAGCTGCTTCAAATGTGGGGCTTTCAAAGACGACATGTCGGCTGCAGCAGGAGGCTTCGACTTCGACATGTCGCGCTCTCGAGGAATGTCC
CCTTTTGGTTTTGCAAATCCCGCCCGTACTGGTGCCTCCGCTTGGAAATCTGGTGACTGGATTTGTGCCAGGTCCGGATGCAATGAACATAACTTCGCAAGCAGGATGGA
ATGCTTCAGATGCAGTGCGCCAAAAGACTCATACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCGACCGGGAGACTGGAACTGCAGGTCGTGCCAGCACCTGAACTTCCAGAGGAGGGACATGTGCCAGCGCTGCGGCGACCCCAAGTCCGGCGGCGGCGGCGGCGA
CTTCGGCGGTCTGATGAACGGCGGCGGAAGGGGCGGGTCTGGGTTCGGGTACGGCGGCTCCGATGTGAGGCCCGGCGACTGGTACTGCAGCATAGGAAACTGTGGAGCCC
ACAATTTCGCAAGCCGGTCGAGCTGCTTCAAATGTGGGGCTTTCAAAGACGACATGTCGGCTGCAGCAGGAGGCTTCGACTTCGACATGTCGCGCTCTCGAGGAATGTCC
CCTTTTGGTTTTGCAAATCCCGCCCGTACTGGTGCCTCCGCTTGGAAATCTGGTGACTGGATTTGTGCCAGGTCCGGATGCAATGAACATAACTTCGCAAGCAGGATGGA
ATGCTTCAGATGCAGTGCGCCAAAAGACTCATACTAA
Protein sequenceShow/hide protein sequence
MSRPGDWNCRSCQHLNFQRRDMCQRCGDPKSGGGGGDFGGLMNGGGRGGSGFGYGGSDVRPGDWYCSIGNCGAHNFASRSSCFKCGAFKDDMSAAAGGFDFDMSRSRGMS
PFGFANPARTGASAWKSGDWICARSGCNEHNFASRMECFRCSAPKDSY