; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038599 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038599
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold12:598653..604779
RNA-Seq ExpressionSpg038599
SyntenySpg038599
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW78845.1 hypothetical protein CK203_043108 [Vitis vinifera]2.9e-3448.43Show/hide
Query:  MIQFNKFIEGSCLTDPPLVNGSFTWAN---SRVRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG
        M  F+ FI  S L DPPL N SFTW+N   S V  R+DRFL S  W  +F    Q + PR TSDHWP+VL++   +WGP PF FENMWL H +FK S   
Subjt:  MIQFNKFIEGSCLTDPPLVNGSFTWAN---SRVRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG

Query:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLEEEVA
        WW       WEG++FM +L+ +K KL+ WN+  F   + RKK IL  I  ID +E+E A
Subjt:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLEEEVA

RVX20162.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]3.8e-3448.43Show/hide
Query:  MIQFNKFIEGSCLTDPPLVNGSFTWAN---SRVRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG
        M  F+ FI  S L DPPL N SFTW+N   S V  R+DRFL S  W  +F    Q + PR TSDHWP+VL++   +WGP PF FENMWL H SF  S   
Subjt:  MIQFNKFIEGSCLTDPPLVNGSFTWAN---SRVRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG

Query:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLEEEVA
        WW       WEG++FM +L+ +K KL+ WN+  F   + RKK IL  I +ID  E+E A
Subjt:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLEEEVA

VVA25489.1 Hypothetical predicted protein, partial [Prunus dulcis]1.3e-3447.74Show/hide
Query:  MIQFNKFIEGSCLTDPPLVNGSFTWANSR---VRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG
        M  FN FI+ + L DP L+N SFTW+N R   V  R+DRFL S  W ++F  V+ +   RVTSDH P++L++  L+WGP PF FENMW+ HP FK     
Subjt:  MIQFNKFIEGSCLTDPPLVNGSFTWANSR---VRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG

Query:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLE
        WW  +    WEGY+F  RLR +K+K++ WN+EVF D    KKE   RI  +D +E
Subjt:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLE

VVA39726.1 Hypothetical predicted protein, partial [Prunus dulcis]2.2e-3447.1Show/hide
Query:  MIQFNKFIEGSCLTDPPLVNGSFTWANSR---VRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG
        M  FN FI+ + L DP L+N SFTW+N R   V  R+DRFL S  W ++F  V+ +   RVTSDH P+ L++ +L+WGP PF FENMW+ H  FK     
Subjt:  MIQFNKFIEGSCLTDPPLVNGSFTWANSR---VRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG

Query:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLE
        WW  +    WEGY+F  RLR +K+K++ WN+EVF D    KKE   RI  +D +E
Subjt:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLE

XP_019077787.1 PREDICTED: uncharacterized protein LOC104880237 [Vitis vinifera]2.2e-3448.43Show/hide
Query:  MIQFNKFIEGSCLTDPPLVNGSFTWAN---SRVRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG
        M +F+ FI  S L DPPL N SFTW+N   S V  R+DRFL S  W  +F    Q + PR TSDHWP+VL++   +WGP PF FENMWL H SFK     
Subjt:  MIQFNKFIEGSCLTDPPLVNGSFTWAN---SRVRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG

Query:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLEEEVA
        WW       WEG++FM +L+ +K KL+ WN+  F   + RKK IL  I +ID  E+E A
Subjt:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLEEEVA

TrEMBL top hitse value%identityAlignment
A0A438CAL5 Transposon TX1 uncharacterized 149 kDa protein2.4e-3448.41Show/hide
Query:  MIQFNKFIEGSCLTDPPLVNGSFTWANSR---VRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG
        M   + FI  + L DPPL + SFTW+N +   V  R+DRFL S  W + F    Q + PR TSDHWP+VL S   +WGP PF FENMWL HPSFK S   
Subjt:  MIQFNKFIEGSCLTDPPLVNGSFTWANSR---VRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG

Query:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLEEE
        WW       WEG++FM +L+ LK KL++WN+  F D   RKK IL  I   D +E+E
Subjt:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLEEE

A0A438H2Y0 Uncharacterized protein1.4e-3448.43Show/hide
Query:  MIQFNKFIEGSCLTDPPLVNGSFTWAN---SRVRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG
        M  F+ FI  S L DPPL N SFTW+N   S V  R+DRFL S  W  +F    Q + PR TSDHWP+VL++   +WGP PF FENMWL H +FK S   
Subjt:  MIQFNKFIEGSCLTDPPLVNGSFTWAN---SRVRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG

Query:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLEEEVA
        WW       WEG++FM +L+ +K KL+ WN+  F   + RKK IL  I  ID +E+E A
Subjt:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLEEEVA

A0A438KG26 Transposon TX1 uncharacterized 149 kDa protein1.9e-3448.43Show/hide
Query:  MIQFNKFIEGSCLTDPPLVNGSFTWAN---SRVRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG
        M  F+ FI  S L DPPL N SFTW+N   S V  R+DRFL S  W  +F    Q + PR TSDHWP+VL++   +WGP PF FENMWL H SF  S   
Subjt:  MIQFNKFIEGSCLTDPPLVNGSFTWAN---SRVRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG

Query:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLEEEVA
        WW       WEG++FM +L+ +K KL+ WN+  F   + RKK IL  I +ID  E+E A
Subjt:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLEEEVA

A0A5E4FED8 Reverse transcriptase domain-containing protein (Fragment)6.4e-3547.74Show/hide
Query:  MIQFNKFIEGSCLTDPPLVNGSFTWANSR---VRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG
        M  FN FI+ + L DP L+N SFTW+N R   V  R+DRFL S  W ++F  V+ +   RVTSDH P++L++  L+WGP PF FENMW+ HP FK     
Subjt:  MIQFNKFIEGSCLTDPPLVNGSFTWANSR---VRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG

Query:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLE
        WW  +    WEGY+F  RLR +K+K++ WN+EVF D    KKE   RI  +D +E
Subjt:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLE

A0A5E4GJ11 Reverse transcriptase domain-containing protein (Fragment)1.1e-3447.1Show/hide
Query:  MIQFNKFIEGSCLTDPPLVNGSFTWANSR---VRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG
        M  FN FI+ + L DP L+N SFTW+N R   V  R+DRFL S  W ++F  V+ +   RVTSDH P+ L++ +L+WGP PF FENMW+ H  FK     
Subjt:  MIQFNKFIEGSCLTDPPLVNGSFTWANSR---VRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPG

Query:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLE
        WW  +    WEGY+F  RLR +K+K++ WN+EVF D    KKE   RI  +D +E
Subjt:  WWNVEVDGIWEGYRFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCAATTCAATAAGTTCATTGAGGGGTCATGCCTTACAGATCCTCCGTTGGTGAATGGGAGCTTTACTTGGGCCAATAGTCGTGTCAGAAGTAGGATTGATCGTTT
TCTGTTGTCTAGGGGTTGGATGGAAGCCTTTAGCACGGTTAGACAAAGCTTGGGCCCAAGGGTAACCTCGGACCACTGGCCGTTAGTCCTCAATTCGGGAGATCTCCGAT
GGGGTCCGTGCCCCTTTGGGTTTGAAAACATGTGGTTGAGTCACCCTTCCTTTAAAGCCTCGCTCCCAGGGTGGTGGAATGTGGAGGTGGACGGCATCTGGGAGGGGTAT
CGTTTCATGGGAAGATTGAGGGCACTTAAGAGGAAGCTCGAAAAGTGGAATCAGGAGGTGTTCGAGGATTGTAGACTAAGGAAAAAGGAAATCTTGGGGAGGATCAAAGT
TATTGATGACTTGGAAGAGGAGGTGGCTGATGTTTCGTTTCACTCGGGGAGCTCTCCTTCGTTTGCTTTTGGCTTCAGTCGTCCGTTGTCCAATAGGGAAACGACGGATG
TTGTGTCCCTTATGTCTTTGATTGAGGAGTTCGATTTCAGGGGGGGAGGAGGGATTTCCGTTGTTGGAGCCCTAGTCCTTCTGACGGGTTCTCTTGTAGCTCCCTTTTTC
GTTGGCTTCTGCAACCTTCTCCCCAAAGGTCAATACCTACAATCGTCTGATGAAAATGATGTCCTCTTTGGTTGGCCCGTTTTGTTGCATTCTGTGTCGAAAGGCAGAGG
AAGATTTGGATCACATTCTGTGGAGTTGTGCCAATGCGCGTGGAGCGTGAGATCGGTTTGCTCAGATGATAAAAATACTTGGCGAACTGGTGGTGTACCACACCTCATTG
GTGAAATAGGGAAATGTTCCTGCAATTTTCGATATGTTGCATATTGCAAACAGAATACTACAGGCATAGATGAAGATTGGGAGAATACCGGTAACAATAGAGGGAGTGGC
GGCGGCGGACCCGCTAGGCGGCAAGAAGGGATCGGCGACAGCGTGAAGAGAGAGGGAAAGGGAGAAGGCGTGAAGGCACGTGAGAGTGAGAGGAAAATGAAAGGGTGGGT
ACCTCTATCTCTTCCCCAAAGAACGCGAAATGCCTCTCGAGATCGAACAATCCGCGCCTGCCCATTGAAACCTTTCTCGGGAAAATTTGCTAAGAATCGAACGAGAAATG
CAGAAAGAATGGGGAAGAAAACTTCTGATTGGAAATGGGCAGTGGTTATACCTAGGCGTCGAATCAGAGGAAGCACTGCGATCTCCACTGTCTCTCCGCGTAGAATAATC
GCAATCTCTGTGTTATCGCGCGGAAAATGTGGCGGCGGAAGCGGCGGAGGGGGAGGAGGAAGAAGAGGAAGGAGCGGCGATGGAGAGGAATGGGGAGGGATGAGGTATTT
AAGAAGCGGCAACAACGTCTGTCGTCGCGATGGCGGTGGAGAGCGGCGAGAAGAAGAATCAGAACGATAA
mRNA sequenceShow/hide mRNA sequence
ATGATCCAATTCAATAAGTTCATTGAGGGGTCATGCCTTACAGATCCTCCGTTGGTGAATGGGAGCTTTACTTGGGCCAATAGTCGTGTCAGAAGTAGGATTGATCGTTT
TCTGTTGTCTAGGGGTTGGATGGAAGCCTTTAGCACGGTTAGACAAAGCTTGGGCCCAAGGGTAACCTCGGACCACTGGCCGTTAGTCCTCAATTCGGGAGATCTCCGAT
GGGGTCCGTGCCCCTTTGGGTTTGAAAACATGTGGTTGAGTCACCCTTCCTTTAAAGCCTCGCTCCCAGGGTGGTGGAATGTGGAGGTGGACGGCATCTGGGAGGGGTAT
CGTTTCATGGGAAGATTGAGGGCACTTAAGAGGAAGCTCGAAAAGTGGAATCAGGAGGTGTTCGAGGATTGTAGACTAAGGAAAAAGGAAATCTTGGGGAGGATCAAAGT
TATTGATGACTTGGAAGAGGAGGTGGCTGATGTTTCGTTTCACTCGGGGAGCTCTCCTTCGTTTGCTTTTGGCTTCAGTCGTCCGTTGTCCAATAGGGAAACGACGGATG
TTGTGTCCCTTATGTCTTTGATTGAGGAGTTCGATTTCAGGGGGGGAGGAGGGATTTCCGTTGTTGGAGCCCTAGTCCTTCTGACGGGTTCTCTTGTAGCTCCCTTTTTC
GTTGGCTTCTGCAACCTTCTCCCCAAAGGTCAATACCTACAATCGTCTGATGAAAATGATGTCCTCTTTGGTTGGCCCGTTTTGTTGCATTCTGTGTCGAAAGGCAGAGG
AAGATTTGGATCACATTCTGTGGAGTTGTGCCAATGCGCGTGGAGCGTGAGATCGGTTTGCTCAGATGATAAAAATACTTGGCGAACTGGTGGTGTACCACACCTCATTG
GTGAAATAGGGAAATGTTCCTGCAATTTTCGATATGTTGCATATTGCAAACAGAATACTACAGGCATAGATGAAGATTGGGAGAATACCGGTAACAATAGAGGGAGTGGC
GGCGGCGGACCCGCTAGGCGGCAAGAAGGGATCGGCGACAGCGTGAAGAGAGAGGGAAAGGGAGAAGGCGTGAAGGCACGTGAGAGTGAGAGGAAAATGAAAGGGTGGGT
ACCTCTATCTCTTCCCCAAAGAACGCGAAATGCCTCTCGAGATCGAACAATCCGCGCCTGCCCATTGAAACCTTTCTCGGGAAAATTTGCTAAGAATCGAACGAGAAATG
CAGAAAGAATGGGGAAGAAAACTTCTGATTGGAAATGGGCAGTGGTTATACCTAGGCGTCGAATCAGAGGAAGCACTGCGATCTCCACTGTCTCTCCGCGTAGAATAATC
GCAATCTCTGTGTTATCGCGCGGAAAATGTGGCGGCGGAAGCGGCGGAGGGGGAGGAGGAAGAAGAGGAAGGAGCGGCGATGGAGAGGAATGGGGAGGGATGAGGTATTT
AAGAAGCGGCAACAACGTCTGTCGTCGCGATGGCGGTGGAGAGCGGCGAGAAGAAGAATCAGAACGATAA
Protein sequenceShow/hide protein sequence
MIQFNKFIEGSCLTDPPLVNGSFTWANSRVRSRIDRFLLSRGWMEAFSTVRQSLGPRVTSDHWPLVLNSGDLRWGPCPFGFENMWLSHPSFKASLPGWWNVEVDGIWEGY
RFMGRLRALKRKLEKWNQEVFEDCRLRKKEILGRIKVIDDLEEEVADVSFHSGSSPSFAFGFSRPLSNRETTDVVSLMSLIEEFDFRGGGGISVVGALVLLTGSLVAPFF
VGFCNLLPKGQYLQSSDENDVLFGWPVLLHSVSKGRGRFGSHSVELCQCAWSVRSVCSDDKNTWRTGGVPHLIGEIGKCSCNFRYVAYCKQNTTGIDEDWENTGNNRGSG
GGGPARRQEGIGDSVKREGKGEGVKARESERKMKGWVPLSLPQRTRNASRDRTIRACPLKPFSGKFAKNRTRNAERMGKKTSDWKWAVVIPRRRIRGSTAISTVSPRRII
AISVLSRGKCGGGSGGGGGGRRGRSGDGEEWGGMRYLRSGNNVCRRDGGGERREEESER