; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038627 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038627
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationscaffold12:2897864..2898304
RNA-Seq ExpressionSpg038627
SyntenySpg038627
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060761.1 formin-like protein 3 [Cucumis melo var. makuwa]2.0e-4470.63Show/hide
Query:  AAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPN-CNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGVPGN
        AAI LS S L LL+ L  +QTS  IS+ PQ+PDAEIKCGSCPCSNPC+Q+L PP PPPPPP+ C PT    PPPPRF YT SS +PPPPRF YTTGVPGN
Subjt:  AAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPN-CNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGVPGN

Query:  LYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW
        LY+IDANN WYYFS  TG RP M A+VVALGCGAL LM F  W
Subjt:  LYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW

KAG6581215.1 hypothetical protein SDJN03_21217, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4874.66Show/hide
Query:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGV
        MAP AAI LSLS LFL +HL D+Q  P   V  QDP++EIKCGSCPCSNPCV++ PPP PPPPPPNC P  PPPPPPPRF Y TS S PPPPRFIYTTGV
Subjt:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGV

Query:  PGNLYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW
        PGNLYQIDANNRWYYFS  T  +PA  ALVVALGCGAL+LM FG W
Subjt:  PGNLYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW

KAG7017949.1 hypothetical protein SDJN02_19815, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-4773.97Show/hide
Query:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGV
        MAP AAI LSLS LFL +HL D+Q  P   V PQDP++EIKCGSCPCSNPCV++ P   PPPPPPNC P  PPPPPPPRF Y TS S PPPPRFIYTTGV
Subjt:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGV

Query:  PGNLYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW
        PGNLYQIDANNRWYYFS  T  +PA  ALVVALGCGAL+LM FG W
Subjt:  PGNLYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW

XP_022984145.1 probable pathogenesis-related protein ARB_02861 [Cucurbita maxima]2.2e-4673.97Show/hide
Query:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGV
        MAP AAI LSLS LFL +HL  A + P   V PQDP++EIKCGSCPCSNPCV++ PPP PPPPPPNC P  PPPPPPPRF Y TS S PPPPRFIYTTGV
Subjt:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGV

Query:  PGNLYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW
        PGNLYQIDANNRWYYFS  T    A  ALVVALGCGAL+LM FG W
Subjt:  PGNLYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW

XP_023528316.1 leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]2.1e-4974.66Show/hide
Query:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGV
        MAP AAI LSLS LFL +HL D+Q  P   V PQDP++EIKCGSCPCSNPCV++ PPP PPPPPPNC P  PPPPPPPRF Y T+ S PPPPRFIYTTGV
Subjt:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGV

Query:  PGNLYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW
        PGNLYQIDANNRWYYFS  T  RPA   LVVALGCGAL+LM FG W
Subjt:  PGNLYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW

TrEMBL top hitse value%identityAlignment
A0A0A0L7R0 Uncharacterized protein2.4e-4366.67Show/hide
Query:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKL----PPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIY
        MAP+AAI LS S L  L+ L ++QTS  I V PQ+PDAEIKCGSCPCSNPC+Q+L    PPP PPPPP  C PT    PPPPRF YTTSS +PPPPRF Y
Subjt:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKL----PPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIY

Query:  TTGVPGNLYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW
        TTGVPGNLY+IDANN WYYFS     RP M A+ VA+GCGAL LM F  W
Subjt:  TTGVPGNLYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW

A0A5A7V4T2 Formin-like protein 39.9e-4570.63Show/hide
Query:  AAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPN-CNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGVPGN
        AAI LS S L LL+ L  +QTS  IS+ PQ+PDAEIKCGSCPCSNPC+Q+L PP PPPPPP+ C PT    PPPPRF YT SS +PPPPRF YTTGVPGN
Subjt:  AAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPN-CNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGVPGN

Query:  LYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW
        LY+IDANN WYYFS  TG RP M A+VVALGCGAL LM F  W
Subjt:  LYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW

A0A6J1GAW3 leucine-rich repeat extensin-like protein 23.3e-3264.19Show/hide
Query:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCP-CSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTG
        MAP AAIFLSL L F+       QTSP IS  P DPD EI C S   CSNP VQ+L  PSPP P        PPP PPPRFTYTT SS PPP RFIYTTG
Subjt:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCP-CSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTG

Query:  VPGNLYQIDANNRWYYFSDATGKRPAMVAL-VVALGCGALDLMMFGNW
        VP +LYQ D  NRWYYFS A GK PAM AL VV L CGALDL++FG W
Subjt:  VPGNLYQIDANNRWYYFSDATGKRPAMVAL-VVALGCGALDLMMFGNW

A0A6J1J7W0 probable pathogenesis-related protein ARB_028611.1e-4673.97Show/hide
Query:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGV
        MAP AAI LSLS LFL +HL  A + P   V PQDP++EIKCGSCPCSNPCV++ PPP PPPPPPNC P  PPPPPPPRF Y TS S PPPPRFIYTTGV
Subjt:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGV

Query:  PGNLYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW
        PGNLYQIDANNRWYYFS  T    A  ALVVALGCGAL+LM FG W
Subjt:  PGNLYQIDANNRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW

A0A6J1KHA8 leucine-rich repeat extensin-like protein 33.8e-2062.61Show/hide
Query:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGS-CPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTG
        MAP AAIFLSL L F+       Q SP I   P DP AEI CGS  PCSNP VQ+L  PSPP P        PPP PPPRFTYTT SS PPPP+FIYTTG
Subjt:  MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGS-CPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTG

Query:  VPGNLYQIDANNRWY
        VP +LYQ D  NRWY
Subjt:  VPGNLYQIDANNRWY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein2.2e-0440.7Show/hide
Query:  ISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPP-PPPPRFTYTTSS-----SSPPPPRFIYTTGVPGNLYQID
        I +  +D  AE+         PC+Q  PPP P PPPP+C P+ PPP PPPP+ +    S       PPPP +++T   PG+LY I+
Subjt:  ISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPP-PPPPRFTYTTSS-----SSPPPPRFIYTTGVPGNLYQID

AT1G23040.1 hydroxyproline-rich glycoprotein family protein2.1e-0737.98Show/hide
Query:  TSPSISVGPQDPDAEIKC------GSCPCSNPCVQKLPPPSPP---PPPPNCNPTSPPPPPPPRFTYTTSSSSPPPP--RFIYTTGVPGNLYQIDANNRW
        T P++  G    DA ++           CS  C+Q  PPPSPP   PPPP C P    PPPPP+     SS  PPPP   F+Y TG PGNLY +D     
Subjt:  TSPSISVGPQDPDAEIKC------GSCPCSNPCVQKLPPPSPP---PPPPNCNPTSPPPPPPPRFTYTTSSSSPPPP--RFIYTTGVPGNLYQIDANNRW

Query:  YYFSDATGKRPAMVALVVALGCGALDLMM
          F  A GK   +V L   +  G +  ++
Subjt:  YYFSDATGKRPAMVALVVALGCGALDLMM

AT1G70990.1 proline-rich family protein1.4e-0635.38Show/hide
Query:  LLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGVPGNLYQIDANNRWYY
        ++I+  D+ T+  +    +DP   IKC       PC+Q +PPPSPPPP P     + PPPP P      S   PPP  +IY TG PG LY ID       
Subjt:  LLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGVPGNLYQIDANNRWYY

Query:  FSDATGKRPAMVALVVALGCGALDLMMFGN
        F  A  K   +V +   +  G +  +M  N
Subjt:  FSDATGKRPAMVALVVALGCGALDLMMFGN

AT3G03350.1 NAD(P)-binding Rossmann-fold superfamily protein6.2e-0757.14Show/hide
Query:  TSPPPPPPPRFTY-TTSSSSPPPPRFIYTTGVPGNLYQIDANNRWYYFS
        T+P  PPPPR TY + SSSSPPPP+++Y TGVPG LY+ + +++W Y S
Subjt:  TSPPPPPPPRFTY-TTSSSSPPPPRFIYTTGVPGNLYQIDANNRWYYFS

AT3G03350.2 NAD(P)-binding Rossmann-fold superfamily protein1.1e-0843.66Show/hide
Query:  TSPPPPPPPRFTY-TTSSSSPPPPRFIYTTGVPGNLYQIDANNRWYYFSDATGKRPAMVALVVALGCGALD
        T+P  PPPPR TY + SSSSPPPP+++Y TGVPG LY+ + +++W Y S         + ++V +G G ++
Subjt:  TSPPPPPPPRFTY-TTSSSSPPPPRFIYTTGVPGNLYQIDANNRWYYFSDATGKRPAMVALVVALGCGALD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCCTGGGCCGCCATTTTTCTCTCCCTTTCTCTTCTCTTCCTCCTCATTCACCTCGACGACGCTCAAACCTCCCCGTCGATATCAGTCGGCCCGCAGGATCCCGA
CGCCGAAATAAAATGTGGATCATGCCCTTGTTCCAACCCATGTGTTCAAAAATTGCCACCACCATCACCACCGCCGCCACCACCGAATTGTAACCCAACATCACCGCCTC
CACCCCCACCCCCGAGGTTTACTTATACAACGTCGTCGTCTTCACCACCGCCTCCGAGGTTTATTTATACGACGGGTGTTCCCGGTAACTTGTACCAGATCGACGCGAAT
AACCGTTGGTATTACTTCTCCGACGCGACCGGGAAGCGGCCGGCCATGGTGGCTCTGGTGGTGGCACTTGGCTGTGGAGCTTTGGATCTCATGATGTTTGGTAATTGGTA
A
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCCTGGGCCGCCATTTTTCTCTCCCTTTCTCTTCTCTTCCTCCTCATTCACCTCGACGACGCTCAAACCTCCCCGTCGATATCAGTCGGCCCGCAGGATCCCGA
CGCCGAAATAAAATGTGGATCATGCCCTTGTTCCAACCCATGTGTTCAAAAATTGCCACCACCATCACCACCGCCGCCACCACCGAATTGTAACCCAACATCACCGCCTC
CACCCCCACCCCCGAGGTTTACTTATACAACGTCGTCGTCTTCACCACCGCCTCCGAGGTTTATTTATACGACGGGTGTTCCCGGTAACTTGTACCAGATCGACGCGAAT
AACCGTTGGTATTACTTCTCCGACGCGACCGGGAAGCGGCCGGCCATGGTGGCTCTGGTGGTGGCACTTGGCTGTGGAGCTTTGGATCTCATGATGTTTGGTAATTGGTA
A
Protein sequenceShow/hide protein sequence
MAPWAAIFLSLSLLFLLIHLDDAQTSPSISVGPQDPDAEIKCGSCPCSNPCVQKLPPPSPPPPPPNCNPTSPPPPPPPRFTYTTSSSSPPPPRFIYTTGVPGNLYQIDAN
NRWYYFSDATGKRPAMVALVVALGCGALDLMMFGNW