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Spg038630 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038630
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptiontRNA threonylcarbamoyladenosine dehydratase isoform X1
Genome locationscaffold12:1626098..1628911
RNA-Seq ExpressionSpg038630
SyntenySpg038630
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0008641 - ubiquitin-like modifier activating enzyme activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029092.1 SPAC1A6.10, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-2864.46Show/hide
Query:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQ--------RVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--
        MEGK KSLS+VGAGALFGSVSTFFILKL++RQV+Q        R+ANQAE+K T+LRGNG M+ETTVKGS VV CT HGIS  DLL DEIVSEQLT    
Subjt:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQ--------RVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--

Query:  YFHISAILNVLHFTVIKESLG
        +F + A  NV    V+   LG
Subjt:  YFHISAILNVLHFTVIKESLG
XP_008438195.1 PREDICTED: tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Cucumis melo]1.6e-2866.67Show/hide
Query:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTS---------TY
        MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQ    +A+QAESKAT+LRGNGDM+ETTVKGS VV CT+ G+S  DLL DEIVSEQLTS          +
Subjt:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTS---------TY

Query:  FHISAILNVLHFTVIKESLG
        F +S+  NV    V+   LG
Subjt:  FHISAILNVLHFTVIKESLG
XP_008438196.1 PREDICTED: tRNA threonylcarbamoyladenosine dehydratase isoform X2 [Cucumis melo]7.0e-2969.91Show/hide
Query:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--YFHISAIL
        MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQ    +A+QAESKAT+LRGNGDM+ETTVKGS VV CT+ G+S  DLL DEIVSEQLT    +F +S+  
Subjt:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--YFHISAIL

Query:  NVLHFTVIKESLG
        NV    V+   LG
Subjt:  NVLHFTVIKESLG
XP_011650800.1 tRNA threonylcarbamoyladenosine dehydratase [Cucumis sativus]8.5e-2767.26Show/hide
Query:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--YFHISAIL
        MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQ    +A+ AESKAT+LRGN +M+ETTVKGS VV CT+ G+S  DLL DEIVSEQLT    +F +S+  
Subjt:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--YFHISAIL

Query:  NVLHFTVIKESLG
        NV    V+   LG
Subjt:  NVLHFTVIKESLG
XP_023538843.1 tRNA threonylcarbamoyladenosine dehydratase [Cucurbita pepo subsp. pepo]1.3e-2768.14Show/hide
Query:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--YFHISAIL
        MEGK KSLS+VGAGALFGSVSTFFILKL++R    R+ANQAE+KAT+LRGNG M+ETTVKGS VV CT HGIS  DLL DEIVSEQLT    +F +SA  
Subjt:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--YFHISAIL

Query:  NVLHFTVIKESLG
        NV    V+   LG
Subjt:  NVLHFTVIKESLG
TrEMBL top hitse value%identityAlignment
A0A1S3AWE8 tRNA threonylcarbamoyladenosine dehydratase isoform X23.4e-2969.91Show/hide
Query:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--YFHISAIL
        MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQ    +A+QAESKAT+LRGNGDM+ETTVKGS VV CT+ G+S  DLL DEIVSEQLT    +F +S+  
Subjt:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--YFHISAIL

Query:  NVLHFTVIKESLG
        NV    V+   LG
Subjt:  NVLHFTVIKESLG
A0A1S3AWF9 tRNA threonylcarbamoyladenosine dehydratase isoform X17.5e-2966.67Show/hide
Query:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTS---------TY
        MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQ    +A+QAESKAT+LRGNGDM+ETTVKGS VV CT+ G+S  DLL DEIVSEQLTS          +
Subjt:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTS---------TY

Query:  FHISAILNVLHFTVIKESLG
        F +S+  NV    V+   LG
Subjt:  FHISAILNVLHFTVIKESLG
A0A5D3D3C0 tRNA threonylcarbamoyladenosine dehydratase isoform X23.4e-2969.91Show/hide
Query:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--YFHISAIL
        MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQ    +A+QAESKAT+LRGNGDM+ETTVKGS VV CT+ G+S  DLL DEIVSEQLT    +F +S+  
Subjt:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--YFHISAIL

Query:  NVLHFTVIKESLG
        NV    V+   LG
Subjt:  NVLHFTVIKESLG
A0A6J1F2I9 tRNA threonylcarbamoyladenosine dehydratase isoform X14.1e-2766.37Show/hide
Query:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--YFHISAIL
        MEGK KSLS+VGAGALFGSVSTFFILKL++R    R+ANQAE+K T+LRGNG M+ETTVKGS  V CT HGIS  DLL DEIVSEQLT    +F +SA  
Subjt:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--YFHISAIL

Query:  NVLHFTVIKESLG
        NV    V+   LG
Subjt:  NVLHFTVIKESLG
A0A6J1I7L9 tRNA threonylcarbamoyladenosine dehydratase isoform X15.4e-2767.26Show/hide
Query:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--YFHISAIL
        MEGK KSLS+VGAGALFGSVSTFFILKL++R    R+ANQAE+KAT+LRGNG M+ETTVKGS VV CT H IS  DLL DEIVSEQLT    +F +SA  
Subjt:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTST--YFHISAIL

Query:  NVLHFTVIKESLG
        NV    V+   LG
Subjt:  NVLHFTVIKESLG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G37530.1 NAD(P)-binding Rossmann-fold superfamily protein4.3e-0846.59Show/hide
Query:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLT
        ME K K LSLVGAGAL GS+ST  +LKLL R   +++    E+    L GNG  IE+  +  +V        +  DLL DEIVSE LT
Subjt:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLT
AT5G37530.2 NAD(P)-binding Rossmann-fold superfamily protein5.6e-0846.59Show/hide
Query:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLT
        ME K K LSLVGAGAL GS+ST  +LKLL R   +++    E+  T   GNG  IE+  +  +V        +  DLL DEIVSE LT
Subjt:  MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAAAATTCAAGTCTCTTTCGTTGGTGGGAGCTGGAGCTCTCTTCGGCTCCGTTTCAACCTTCTTCATCCTCAAGCTTCTTCACAGGCAAGTTCACCAACGGGT
CGCGAACCAAGCTGAATCGAAGGCAACCAGGCTGCGTGGTAATGGAGATATGATTGAGACTACTGTAAAGGGCAGTTCTGTAGTTGAGTGCACTGATCATGGGATTTCTT
ATGGAGACCTTCTAAATGATGAAATTGTTTCCGAACAGCTAACAAGCACCTACTTCCATATTTCTGCAATTCTTAATGTTCTTCACTTTACGGTCATCAAGGAGAGCCTA
GGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGAAAATTCAAGTCTCTTTCGTTGGTGGGAGCTGGAGCTCTCTTCGGCTCCGTTTCAACCTTCTTCATCCTCAAGCTTCTTCACAGGCAAGTTCACCAACGGGT
CGCGAACCAAGCTGAATCGAAGGCAACCAGGCTGCGTGGTAATGGAGATATGATTGAGACTACTGTAAAGGGCAGTTCTGTAGTTGAGTGCACTGATCATGGGATTTCTT
ATGGAGACCTTCTAAATGATGAAATTGTTTCCGAACAGCTAACAAGCACCTACTTCCATATTTCTGCAATTCTTAATGTTCTTCACTTTACGGTCATCAAGGAGAGCCTA
GGGTGA
Protein sequenceShow/hide protein sequence
MEGKFKSLSLVGAGALFGSVSTFFILKLLHRQVHQRVANQAESKATRLRGNGDMIETTVKGSSVVECTDHGISYGDLLNDEIVSEQLTSTYFHISAILNVLHFTVIKESL
G