; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038694 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038694
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibosomal protein S21 family protein isoform 1
Genome locationscaffold12:5362405..5364818
RNA-Seq ExpressionSpg038694
SyntenySpg038694
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001911 - Ribosomal protein S21


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573697.1 hypothetical protein SDJN03_27584, partial [Cucurbita argyrosperma subsp. sororia]2.5e-4287.61Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS
        MNSLARNISCSIRSSIH T S   LHC QQQWRGIRVKVLNGNLE+A+TFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDL+RKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS

Query:  ILIKKVRGLPASF
        ILIKKVRGL   F
Subjt:  ILIKKVRGLPASF

KAG6581566.1 Cycloartenol-C-24-methyltransferase, partial [Cucurbita argyrosperma subsp. sororia]6.5e-4389.19Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS
        MNSL+RN+SCSIRSS+H T+ LQHLH QQQQWRGIRVKVLNGNLE+ALTFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDL+RKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS

Query:  ILIKKVRGLPA
        ILIKKVRGL A
Subjt:  ILIKKVRGLPA

XP_022151802.1 uncharacterized protein LOC111019699 [Momordica charantia]1.3e-4390.18Show/hide
Query:  MNSLARNISCSIRSSIHTTDS---LQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRK
        MNSLARN+SC IR SIHTTDS   LQ+LHCQQQQWRGIRVKVLNGNLE+AL FLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDL+RK
Subjt:  MNSLARNISCSIRSSIHTTDS---LQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRK

Query:  LKSILIKKVRGL
        LK+ILIKKVRGL
Subjt:  LKSILIKKVRGL

XP_022934889.1 uncharacterized protein LOC111441929 [Cucurbita moschata]1.9e-4289.91Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS
        MNSL+RN+SCSIRSS+H T+ LQHLH QQQQWRGIRVKVLNGNLE+ALTFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDL+RKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS

Query:  ILIKKVRGL
        ILIKKVRGL
Subjt:  ILIKKVRGL

XP_022982723.1 uncharacterized protein LOC111481507 [Cucurbita maxima]2.5e-4289.91Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS
        MNSL+RN+SCSIRSS+H T+ L+HLH QQQQWRGIRVKVLNGNLE+ALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDL+RKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS

Query:  ILIKKVRGL
        ILIKKVRGL
Subjt:  ILIKKVRGL

TrEMBL top hitse value%identityAlignment
A0A6J1DEG8 uncharacterized protein LOC1110196996.3e-4490.18Show/hide
Query:  MNSLARNISCSIRSSIHTTDS---LQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRK
        MNSLARN+SC IR SIHTTDS   LQ+LHCQQQQWRGIRVKVLNGNLE+AL FLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDL+RK
Subjt:  MNSLARNISCSIRSSIHTTDS---LQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRK

Query:  LKSILIKKVRGL
        LK+ILIKKVRGL
Subjt:  LKSILIKKVRGL

A0A6J1F3V2 uncharacterized protein LOC1114419299.1e-4389.91Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS
        MNSL+RN+SCSIRSS+H T+ LQHLH QQQQWRGIRVKVLNGNLE+ALTFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDL+RKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS

Query:  ILIKKVRGL
        ILIKKVRGL
Subjt:  ILIKKVRGL

A0A6J1G018 uncharacterized protein LOC1114494635.9e-4289.91Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS
        MNSLARNISCSIRSSIH T S   LHC QQQWRGIRVKVLNGNLE+A+TFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDL+RKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS

Query:  ILIKKVRGL
        ILIKKVRGL
Subjt:  ILIKKVRGL

A0A6J1HQF3 uncharacterized protein LOC1114664312.0e-4290.83Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS
        MNSLARNISCSIRSSIH T S   LHC QQQWRGIRVKVLNGNLE+A+TFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDL+RKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS

Query:  ILIKKVRGL
        ILIKKVRGL
Subjt:  ILIKKVRGL

A0A6J1J5L6 uncharacterized protein LOC1114815071.2e-4289.91Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS
        MNSL+RN+SCSIRSS+H T+ L+HLH QQQQWRGIRVKVLNGNLE+ALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDL+RKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS

Query:  ILIKKVRGL
        ILIKKVRGL
Subjt:  ILIKKVRGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26360.1 Ribosomal protein S21 family protein7.7e-2662.39Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS
        MN++A+ +     + + T  SL     Q QQ RGIRVKV + +L++ALT LQ+KMQSSG+ERLIK  QTHHIKNSEK+VLARKNLER+I+S D +RKL+S
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKS

Query:  ILIKKVRGL
        ILIKKVRGL
Subjt:  ILIKKVRGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCGTTGGCGCGGAACATATCATGCTCCATCAGGTCTTCGATTCACACCACTGACTCGCTACAGCACCTTCATTGTCAGCAGCAGCAATGGAGGGGAATCCGAGT
GAAGGTGCTGAACGGGAATCTAGAGCAGGCACTGACATTTTTGCAAAGGAAGATGCAATCGAGCGGAATCGAGCGGCTGATTAAGCGTGAACAGACTCACCATATCAAGA
ATTCGGAGAAACGAGTTTTGGCCCGAAAGAATTTGGAGCGCAAAATTCGATCGCAGGACCTCTCTCGCAAGCTCAAATCCATCCTTATAAAGAAAGTCAGGGGTCTGCCA
GCGAGTTTTGTTCAAAGACAAGGACTTACTGACCGAGTCGCCCTCGGGATTGAGCTGGAGCTGGATTGTACTAAAACCTGTAAGATCTCTATTCCTGATCAG
mRNA sequenceShow/hide mRNA sequence
ATGAACTCGTTGGCGCGGAACATATCATGCTCCATCAGGTCTTCGATTCACACCACTGACTCGCTACAGCACCTTCATTGTCAGCAGCAGCAATGGAGGGGAATCCGAGT
GAAGGTGCTGAACGGGAATCTAGAGCAGGCACTGACATTTTTGCAAAGGAAGATGCAATCGAGCGGAATCGAGCGGCTGATTAAGCGTGAACAGACTCACCATATCAAGA
ATTCGGAGAAACGAGTTTTGGCCCGAAAGAATTTGGAGCGCAAAATTCGATCGCAGGACCTCTCTCGCAAGCTCAAATCCATCCTTATAAAGAAAGTCAGGGGTCTGCCA
GCGAGTTTTGTTCAAAGACAAGGACTTACTGACCGAGTCGCCCTCGGGATTGAGCTGGAGCTGGATTGTACTAAAACCTGTAAGATCTCTATTCCTGATCAG
Protein sequenceShow/hide protein sequence
MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRVKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLSRKLKSILIKKVRGLP
ASFVQRQGLTDRVALGIELELDCTKTCKISIPDQ