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Spg038696 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038696
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationscaffold12:2770142..2773539
RNA-Seq ExpressionSpg038696
SyntenySpg038696
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149790.1 probable calcium-binding protein CML28 [Cucumis sativus]2.5e-3187.95Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MAD+GVN+A+ ERIFKRFDANGDG+ISA ELGDALN FGVSSEDAKRMMDAIDKDGDG+ISF EF DFAKDNRALMKDFAKAF
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

XP_016902062.1 PREDICTED: polcalcin Bra n 2-like [Cucumis melo]9.1e-3490.36Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MAD+GVN+A+CERIFKRFDANGDG+ISA ELGDALNGFGVSSEDAKRMMDAIDKDGDG+ISF EF+DFAKDNRALMKDFAKAF
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

XP_022948513.1 probable calcium-binding protein CML28 [Cucurbita moschata]2.0e-3391.57Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MADNGV++AECERIFKRFDANGDGQISA ELGDALNG GVSSEDAKRMMDAIDKDGDGFISF EF +FAKDNRALMKDFAKAF
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

XP_023526616.1 probable calcium-binding protein CML28 [Cucurbita pepo subsp. pepo]1.8e-2984.34Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MA++ V+ AECERIFKRFDANGDG ISAAEL DALNG GV++E+AKRMMDAIDKDGDGFIS  EFADFAKDNRALMKDFAKAF
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

XP_038874793.1 probable calcium-binding protein CML28 [Benincasa hispida]1.9e-3186.75Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MA++GV+ A+CERIFKRFDANGDG+ISA ELGDALNGFGVS+EDAKRMMDAIDKDGDG ISF EFA+FAKDNRALMKDFAKAF
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

TrEMBL top hitse value%identityAlignment
A0A0A0L775 Putative calcium-binding protein CML281.2e-3187.95Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MAD+GVN+A+ ERIFKRFDANGDG+ISA ELGDALN FGVSSEDAKRMMDAIDKDGDG+ISF EF DFAKDNRALMKDFAKAF
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

A0A1S4E1G1 polcalcin Bra n 2-like4.4e-3490.36Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MAD+GVN+A+CERIFKRFDANGDG+ISA ELGDALNGFGVSSEDAKRMMDAIDKDGDG+ISF EF+DFAKDNRALMKDFAKAF
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

A0A6J1G9I0 probable calcium-binding protein CML289.8e-3491.57Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MADNGV++AECERIFKRFDANGDGQISA ELGDALNG GVSSEDAKRMMDAIDKDGDGFISF EF +FAKDNRALMKDFAKAF
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

A0A6J1J5E7 polcalcin Syr v 3-like2.5e-2966.07Show/hide
Query:  ENRRREEEEEEEFVPNRIESNQIKPPATIMADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKD
        E R+R++    E   +R+++  +   A  MA++ ++ AECERIFKRFDANGDG ISAAELGDALNG GV++E+AKRMMDAIDKDGDGFIS+ EFADF K+
Subjt:  ENRRREEEEEEEFVPNRIESNQIKPPATIMADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKD

Query:  NRALMKDFAKAF
        NRALMKDFAKAF
Subjt:  NRALMKDFAKAF

A0A6J1KB11 probable calcium-binding protein CML289.8e-3491.57Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MADNGV++AECERIFKRFDANGDGQISA ELGDALNG GVSSEDAKRMMDAIDKDGDGFISF EF +FAKDNRALMKDFAKAF
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

SwissProt top hitse value%identityAlignment
O81092 Polcalcin Ole e 33.9e-1961.9Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFG-VSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MAD+    AE ERIFKRFDANGDG+IS++ELG+ L   G V+ E+ +RMM  ID DGDGFISF EF  FA+ NR L+KD AK F
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFG-VSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

P69198 Polcalcin Bra n 22.7e-2064.29Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFG-VSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MAD     AE +RIFK+FDANGDG+ISA+ELGDAL   G V+ +D KRMM  ID DGDG+IS+ EF+DFA  NR LMKD AK F
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFG-VSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

P69199 Polcalcin Bra r 22.7e-2064.29Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFG-VSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MAD     AE +RIFK+FDANGDG+ISA+ELGDAL   G V+ +D KRMM  ID DGDG+IS+ EF+DFA  NR LMKD AK F
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFG-VSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

Q39419 Polcalcin Bet v 41.3e-1962.2Show/hide
Query:  DNGVNTAECERIFKRFDANGDGQISAAELGDALNGFG-VSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        D+  + AE ERIFKRFDANGDG+ISAAELG+AL   G ++ ++ K MM  ID DGDGFISF EF DF + NR L+KD AK F
Subjt:  DNGVNTAECERIFKRFDANGDGQISAAELGDALNGFG-VSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

Q9SRP7 Probable calcium-binding protein CML289.2e-2166.67Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFG-VSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MAD     AE +RIFK+FDANGDG+ISAAELGDAL   G V+ ED KRMM  ID DGDG+IS+ EF DFA  NR LMKD AK F
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFG-VSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

Arabidopsis top hitse value%identityAlignment
AT1G24620.1 EF hand calcium-binding protein family1.4e-0837.97Show/hide
Query:  ECERIFKRFDANGDGQISAAELGDALNGFG--VSSEDAKRMMDAIDKDGDGFISFLEFADF---AKDNRALMKDFAKAF
        E E +FK+FD NGDG+IS+ ELG  +   G  V  E+ ++ +  ID+ GDG+I+F EF +      D   ++++   AF
Subjt:  ECERIFKRFDANGDGQISAAELGDALNGFG--VSSEDAKRMMDAIDKDGDGFISFLEFADF---AKDNRALMKDFAKAF

AT1G73630.1 EF hand calcium-binding protein family4.9e-0936.56Show/hide
Query:  NRIESNQIKPPATIMADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVS--SEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMK
        N   +N+   P+T M        E +++F +FDANGDG+IS +ELG+     G S   E+  R++D ID D DGFI+  EFA   + + + ++
Subjt:  NRIESNQIKPPATIMADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVS--SEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMK

AT3G03430.1 Calcium-binding EF-hand family protein6.5e-2266.67Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFG-VSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MAD     AE +RIFK+FDANGDG+ISAAELGDAL   G V+ ED KRMM  ID DGDG+IS+ EF DFA  NR LMKD AK F
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFG-VSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF

AT3G07490.1 ARF-GAP domain 112.0e-0736.14Show/hide
Query:  VNTAECERIFKRFDANGDGQISAAELGDALNGFG--VSSEDAKRMMDAIDKDGDGFISFLEFADFAK---DNRALMKDFAKAF
        ++ AE  RIF+ FD NGDG+I+  EL D+L   G  +  +D  +M++ ID +GDG++   EF    +   + R   +D  +AF
Subjt:  VNTAECERIFKRFDANGDGQISAAELGDALNGFG--VSSEDAKRMMDAIDKDGDGFISFLEFADFAK---DNRALMKDFAKAF

AT5G17480.1 pollen calcium-binding protein 11.8e-1963.1Show/hide
Query:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFG-VSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF
        MAD     AE +RIFK+FDANGDG+ISAAEL +AL   G V+++D KRMM  ID DGDG IS+ EF DFA  NR LMKD AK F
Subjt:  MADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFG-VSSEDAKRMMDAIDKDGDGFISFLEFADFAKDNRALMKDFAKAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGGAAGGAGGATTCAGTCGACCCCTTGTTGTTGAATCCGATGCTTCTAAGGGCAAAATCGCGATTATTAAAGGAGGATGAAAATCGAAGACGAGAAGAAGAAGA
AGAAGAAGAATTTGTTCCAAATCGAATCGAATCAAATCAAATCAAACCTCCAGCAACAATAATGGCGGACAATGGCGTGAACACGGCCGAATGCGAGAGGATCTTCAAGC
GATTCGACGCGAACGGCGACGGGCAGATCTCGGCGGCGGAGCTCGGCGACGCGTTGAACGGATTCGGAGTGAGCTCCGAGGACGCGAAGAGGATGATGGACGCCATCGAC
AAAGATGGCGATGGCTTCATTTCGTTCCTAGAATTCGCCGATTTCGCCAAGGATAATCGCGCCTTGATGAAGGATTTTGCCAAGGCGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGGAAGGAGGATTCAGTCGACCCCTTGTTGTTGAATCCGATGCTTCTAAGGGCAAAATCGCGATTATTAAAGGAGGATGAAAATCGAAGACGAGAAGAAGAAGA
AGAAGAAGAATTTGTTCCAAATCGAATCGAATCAAATCAAATCAAACCTCCAGCAACAATAATGGCGGACAATGGCGTGAACACGGCCGAATGCGAGAGGATCTTCAAGC
GATTCGACGCGAACGGCGACGGGCAGATCTCGGCGGCGGAGCTCGGCGACGCGTTGAACGGATTCGGAGTGAGCTCCGAGGACGCGAAGAGGATGATGGACGCCATCGAC
AAAGATGGCGATGGCTTCATTTCGTTCCTAGAATTCGCCGATTTCGCCAAGGATAATCGCGCCTTGATGAAGGATTTTGCCAAGGCGTTTTAG
Protein sequenceShow/hide protein sequence
MSGKEDSVDPLLLNPMLLRAKSRLLKEDENRRREEEEEEEFVPNRIESNQIKPPATIMADNGVNTAECERIFKRFDANGDGQISAAELGDALNGFGVSSEDAKRMMDAID
KDGDGFISFLEFADFAKDNRALMKDFAKAF