; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038725 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038725
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description3-isopropylmalate dehydratase large subunit
Genome locationscaffold12:7324671..7327713
RNA-Seq ExpressionSpg038725
SyntenySpg038725
Gene Ontology termsNA
InterPro domainsIPR025124 - Domain of unknown function DUF4050


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606796.1 hypothetical protein SDJN03_00138, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2887.14Show/hide
Query:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        GLLLWNQ RQ W+ NKK NRKEQ IR+PKLSWNATYDSLLGSNKPFPQP+PL EMVDFLVDIWEQEGLYD
Subjt:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

KAG7036507.1 hypothetical protein SDJN02_00125 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-3075.27Show/hide
Query:  GGGLTVLVVGLLLWNQTRQDWMQNKKPNRKEQSIRDPKL--------------SWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        GGGLTVLVVGLLLWNQ RQ W+ NKK NRKEQ IR+PKL              SWNATYDSLLGSNKPFPQP+PL EMVDFLVDIWEQEGLYD
Subjt:  GGGLTVLVVGLLLWNQTRQDWMQNKKPNRKEQSIRDPKL--------------SWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

XP_022948689.1 uncharacterized protein LOC111452284 isoform X2 [Cucurbita moschata]1.2e-2887.14Show/hide
Query:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        GLLLWNQ RQ W+ NKK NRKEQ IR+PKLSWNATYDSLLGSNKPFPQP+PL EMVDFLVDIWEQEGLYD
Subjt:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

XP_022998270.1 uncharacterized protein LOC111492957 isoform X2 [Cucurbita maxima]1.9e-2988.57Show/hide
Query:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        GLLLWNQ RQ W+QNKK NRKEQ IR+PKLSWNATYDSLLGSNKPFPQP+PL EMVDFLVDIWEQEGLYD
Subjt:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

XP_038899960.1 uncharacterized protein LOC120087116 isoform X3 [Benincasa hispida]1.6e-2882.43Show/hide
Query:  VLVVGLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        VLVVGLLLWNQTRQ W+QN+K   KE  IR+PKL+WNATYDSLLGSNKPFPQP+PL EMVDFLVD WEQEGLYD
Subjt:  VLVVGLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

TrEMBL top hitse value%identityAlignment
A0A426ZJ18 Uncharacterized protein2.5e-2780Show/hide
Query:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        GLLLWNQTRQ W+ NK+P  + Q +R+P+LSWNATYDSLLGSNKPFPQP+PL+EMVDFLVDIWEQEGLYD
Subjt:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

A0A6J1DJL4 uncharacterized protein LOC111021080 isoform X21.9e-2781.43Show/hide
Query:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        GLLLWNQTRQ W++NKKP  +E  +R+PKL+WNATYDSLLGSNKPFPQPVPL+EMVDFLVD+WEQEGLYD
Subjt:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

A0A6J1GAN2 uncharacterized protein LOC111452284 isoform X26.0e-2987.14Show/hide
Query:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        GLLLWNQ RQ W+ NKK NRKEQ IR+PKLSWNATYDSLLGSNKPFPQP+PL EMVDFLVDIWEQEGLYD
Subjt:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

A0A6J1KC28 uncharacterized protein LOC111492957 isoform X29.2e-3088.57Show/hide
Query:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        GLLLWNQ RQ W+QNKK NRKEQ IR+PKLSWNATYDSLLGSNKPFPQP+PL EMVDFLVDIWEQEGLYD
Subjt:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

A0A6J1KDW3 uncharacterized protein LOC111492957 isoform X17.3e-2773.81Show/hide
Query:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKL--------------SWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        GLLLWNQ RQ W+QNKK NRKEQ IR+PKL              SWNATYDSLLGSNKPFPQP+PL EMVDFLVDIWEQEGLYD
Subjt:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKL--------------SWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15350.1 unknown protein3.4e-2471.83Show/hide
Query:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWN-ATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        GLLLWNQTR+ W+   KPN      +  KL+WN ATYDSLLGSNK FPQP+PL+EMVDFLVDIWEQEGLYD
Subjt:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWN-ATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

AT1G15350.2 unknown protein3.4e-2471.83Show/hide
Query:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWN-ATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        GLLLWNQTR+ W+   KPN      +  KL+WN ATYDSLLGSNK FPQP+PL+EMVDFLVDIWEQEGLYD
Subjt:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWN-ATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

AT1G15350.3 unknown protein3.4e-2471.83Show/hide
Query:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWN-ATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        GLLLWNQTR+ W+   KPN      +  KL+WN ATYDSLLGSNK FPQP+PL+EMVDFLVDIWEQEGLYD
Subjt:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWN-ATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

AT5G25360.1 unknown protein3.7e-2365.71Show/hide
Query:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        GL LWNQTRQ W+ N   ++K+  +R+P +SWNATY+SLLG NK F +P+PL EMVDFLVD+WEQEGLYD
Subjt:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD

AT5G25360.2 unknown protein3.7e-2365.71Show/hide
Query:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD
        GL LWNQTRQ W+ N   ++K+  +R+P +SWNATY+SLLG NK F +P+PL EMVDFLVD+WEQEGLYD
Subjt:  GLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCACAACATTGTCATGTTATTAGGTGGTGGTTTGACAGTTTTAGTTGTAGGTCTTCTTCTCTGGAATCAAACTAGGCAGGATTGGATGCAGAACAAAAAGCCCAA
CCGCAAAGAACAATCGATTCGAGATCCCAAATTAAGTTGGAATGCAACATACGACAGTTTGTTGGGAAGTAACAAGCCATTCCCACAGCCTGTACCTCTTAGTGAAATGG
TTGATTTTCTTGTGGACATATGGGAGCAAGAGGGGCTATACGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCACAACATTGTCATGTTATTAGGTGGTGGTTTGACAGTTTTAGTTGTAGGTCTTCTTCTCTGGAATCAAACTAGGCAGGATTGGATGCAGAACAAAAAGCCCAA
CCGCAAAGAACAATCGATTCGAGATCCCAAATTAAGTTGGAATGCAACATACGACAGTTTGTTGGGAAGTAACAAGCCATTCCCACAGCCTGTACCTCTTAGTGAAATGG
TTGATTTTCTTGTGGACATATGGGAGCAAGAGGGGCTATACGATTGA
Protein sequenceShow/hide protein sequence
MFHNIVMLLGGGLTVLVVGLLLWNQTRQDWMQNKKPNRKEQSIRDPKLSWNATYDSLLGSNKPFPQPVPLSEMVDFLVDIWEQEGLYD