CuGenDBv2

Gene ID	Spg038745
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Succinate dehydrogenase assembly factor 4, mitochondrial
Genome location	scaffold12:1572919..1573369
RNA-Seq Expression	Spg038745
Synteny	Spg038745
Gene Ontology terms	GO:0008652 - cellular amino acid biosynthetic process (biological process) GO:0009064 - glutamine family amino acid metabolic process (biological process) GO:0034553 - mitochondrial respiratory chain complex II assembly (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors (molecular function) GO:0043167 - ion binding (molecular function)
InterPro domains	IPR012875 - Succinate dehydrogenase assembly factor 4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605777.1 Succinate dehydrogenase assembly factor 4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-33

Show/hide

Query:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG
        MSSNL RLF SPPS++AL  V+R TSIS+SRL+SSSANQQPSR E+GV G+EQREAG  +LP Q EAAGDDRD EDEGADVN+ATGEVGGPKGPEPTRYG
Subjt:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG

Query:  DWERN
        DWERN
Subjt:  DWERN

KGN49871.1 hypothetical protein Csa_000062 [Cucumis sativus]

5.1e-29

71.15

Show/hide

Query:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG
        MSSNL RLFSSPP++SALP VSR+T  SLSR +SSS+NQQPSR E+GV+ EEQREAG  + P + EAAGDDR G+DEG D  + T E+GGPKGPEPTRYG
Subjt:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG

Query:  DWER
        DWER
Subjt:  DWER

XP_022957978.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita moschata]

9.0e-34

80.95

Show/hide

Query:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG
        MSSNL RLF SPPS++AL  V+R TSIS+SRL+SSSANQQPSR E+GV GEEQREAG  +LP Q EAAGDDRD EDEGADVN+ATGEVGGPKGPEPTRYG
Subjt:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG

Query:  DWERN
        DWERN
Subjt:  DWERN

XP_022995844.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita maxima]

1.2e-33

80.95

Show/hide

Query:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG
        MSSNL RLF SPPS++AL  V+RVTS S+SRL+SSSANQQPSR E+GV GEEQREAG  +LP Q EAAGDDRD EDEGADVN+ATGEVGGPKGPEPTRYG
Subjt:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG

Query:  DWERN
        DWERN
Subjt:  DWERN

XP_023532848.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita pepo subsp. pepo]

2.0e-33

Show/hide

Query:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG
        MSSNL RLF SPPS+++L  V+R TSIS+SRL+SSSANQQPSR E+GV GEEQREAG  +LP Q EAAGDDRD EDEGADVN+ATGEVGGPKGPEPTRYG
Subjt:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG

Query:  DWERN
        DWERN
Subjt:  DWERN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQ66 Succinate dehydrogenase assembly factor 4, mitochondrial

2.5e-29

71.15

Show/hide

Query:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG
        MSSNL RLFSSPP++SALP VSR+T  SLSR +SSS+NQQPSR E+GV+ EEQREAG  + P + EAAGDDR G+DEG D  + T E+GGPKGPEPTRYG
Subjt:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG

Query:  DWER
        DWER
Subjt:  DWER

A0A5A7TMD3 Succinate dehydrogenase assembly factor 4, mitochondrial

1.0e-27

68.57

Show/hide

Query:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG
        MSS+L RLFSSPP++SALPTV R+TS SLSR +SSS+NQQPSRSE+GV+ EEQREA   + P Q EAAGDDR  +D+G D  +   E+GGPKG EPTRYG
Subjt:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG

Query:  DWERN
        DWERN
Subjt:  DWERN

A0A6J1H1T7 Succinate dehydrogenase assembly factor 4, mitochondrial

4.4e-34

80.95

Show/hide

Query:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG
        MSSNL RLF SPPS++AL  V+R TSIS+SRL+SSSANQQPSR E+GV GEEQREAG  +LP Q EAAGDDRD EDEGADVN+ATGEVGGPKGPEPTRYG
Subjt:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG

Query:  DWERN
        DWERN
Subjt:  DWERN

A0A6J1K722 Succinate dehydrogenase assembly factor 4, mitochondrial

5.7e-34

80.95

Show/hide

Query:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG
        MSSNL RLF SPPS++AL  V+RVTS S+SRL+SSSANQQPSR E+GV GEEQREAG  +LP Q EAAGDDRD EDEGADVN+ATGEVGGPKGPEPTRYG
Subjt:  MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYG

Query:  DWERN
        DWERN
Subjt:  DWERN

M5XLA3 Succinate dehydrogenase assembly factor 4, mitochondrial

2.0e-10

47.22

Show/hide

Query:  MSSNLRRLFSSPPSISA---LPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPT
        M+ NL RLFSS   +S       ++R    S+SRLL SSA Q  S+S+     +EQRE  +E L   +  A DD D +++   +N+ TGE+GGPKGPEPT
Subjt:  MSSNLRRLFSSPPSISA---LPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPT

Query:  RYGDWERN
        R+GDWERN
Subjt:  RYGDWERN

SwissProt top hits

e value

%identity

Alignment

Q5VUM1 Succinate dehydrogenase assembly factor 4, mitochondrial

1.2e-04

Show/hide

Query:  DVNEATGEVGGPKGPEPTRYGDWER
        DVN  T E GGP+GPEPTRYGDWER
Subjt:  DVNEATGEVGGPKGPEPTRYGDWER

Q8BTE0 Succinate dehydrogenase assembly factor 4, mitochondrial

5.3e-05

Show/hide

Query:  DVNEATGEVGGPKGPEPTRYGDWER
        DVN  T E GGPKGPEPTRYGDWER
Subjt:  DVNEATGEVGGPKGPEPTRYGDWER

Q9VLU6 Succinate dehydrogenase assembly factor 4, mitochondrial

2.0e-04

82.61

Show/hide

Query:  NEATGEVGGPKGPEPTRYGDWER
        N  TGE+GGP GPEPTRYGDWER
Subjt:  NEATGEVGGPKGPEPTRYGDWER

Arabidopsis top hits

e value

%identity

Alignment

AT5G67490.1 unknown protein

3.2e-05

38.68

Show/hide

Query:  SSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSA---NQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTR
        ++N+ RL +   S+S     SR     +SR LSS      Q PS ++      +  +   +NL +Q+E   ++ +G   G  VNE TGE+GGP+GPEPTR
Subjt:  SSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSA---NQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTR

Query:  YGDWER
        YGDWE+
Subjt:  YGDWER

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGAGCAATCTCCGCCGTCTATTCTCGTCGCCGCCGAGCATCTCCGCCCTACCGACGGTGAGTCGCGTCACTTCCATCTCGTTGAGCCGACTCCTCAGCTCCTCGGC
GAATCAACAGCCTTCTCGATCGGAGCGAGGCGTTGCCGGCGAGGAACAACGAGAGGCCGGAAATGAAAATTTGCCGATTCAACAAGAGGCTGCTGGAGATGATCGAGACG
GTGAAGATGAAGGAGCTGATGTGAATGAAGCGACCGGTGAGGTCGGTGGACCTAAAGGCCCCGAGCCCACCCGCTACGGCGATTGGGAACGAAACGTTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSSNLRRLFSSPPSISALPTVSRVTSISLSRLLSSSANQQPSRSERGVAGEEQREAGNENLPIQQEAAGDDRDGEDEGADVNEATGEVGGPKGPEPTRYGDWERNV

Spg038745 (gene) of Sponge gourd (cylindrica) v1 genome