; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038757 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038757
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNA/RNP complex-1-interacting phosphatase, putative
Genome locationscaffold12:5392827..5393195
RNA-Seq ExpressionSpg038757
SyntenySpg038757
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048367.1 putative RNA/RNP complex-1-interacting phosphatase [Cucumis melo var. makuwa]5.5e-4377.78Show/hide
Query:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPS---DSSEEKT-KKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS
        MAALSAGHRHFF   S     QFRNR  SPRSIA+LC H+QDPS   D S+EKT KKS ERK+ + GFVQRFEKMG++LKEKLSPQRKGDWKDLTLMSLS
Subjt:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPS---DSSEEKT-KKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQLW
        FAVYVYISQKIVCAYF+WMSMPK LW
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQLW

KAG6581569.1 hypothetical protein SDJN03_21571, partial [Cucurbita argyrosperma subsp. sororia]2.5e-4378.23Show/hide
Query:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLC--RHSQDPSDSSEEKTKKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFA
        MAALSAGHRHFF       A QF NR  SPR I LLC   H+QDPSDSSEEKTKK  E KQ +PGF+QR++KMGMELKEKLSPQRKGDWKD+TLMSLSFA
Subjt:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLC--RHSQDPSDSSEEKTKKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFA

Query:  VYVYISQKIVCAYFVWMSMPKQLW
        VYVYISQKIVCAYF+WMSMPKQLW
Subjt:  VYVYISQKIVCAYFVWMSMPKQLW

KAG6606884.1 hypothetical protein SDJN03_00226, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4379.2Show/hide
Query:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQ---DPSDSSEEKTKKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSF
        MAALSAGHR+FF       A  FRNR  SPRSI LLC H+Q   DPSD SEEK KK  E+KQ IPGFVQRFEKMG+ELKEKLSPQRKGDWKDLTLMSLSF
Subjt:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQ---DPSDSSEEKTKKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSF

Query:  AVYVYISQKIVCAYFVWMSMPKQLW
        AVYVYISQKIVCAYFVWMSMPKQ+W
Subjt:  AVYVYISQKIVCAYFVWMSMPKQLW

KGN58582.1 hypothetical protein Csa_001602 [Cucumis sativus]1.2e-4276.98Show/hide
Query:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPS---DSSEEKT-KKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS
        MAALSAGHRHFF  QS      FRNR  SPRSI++LC H+QDPS   D SEEKT KKS ERK+ + GFVQRFEKMG++LKEKLSPQRKGDWKDLTLMSLS
Subjt:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPS---DSSEEKT-KKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQLW
        FAVYVYISQKIVCAYF+WM+MPK LW
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQLW

XP_022152649.1 uncharacterized protein LOC111020315 [Momordica charantia]1.4e-4179.84Show/hide
Query:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPSDSSEEKTKKSPERK-QKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAV
        MAALSAGHRHFFRR     A+Q R R SSP+SI LLCRHSQDP   SEE +K+  ERK QKI GFV+RFEKMGMELKEKLSPQRKGDWKD+ LMSLSFAV
Subjt:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPSDSSEEKTKKSPERK-QKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAV

Query:  YVYISQKIVCAYFVWMSMPK-QLW
        YVYISQKIVCAYFVWMSMPK QLW
Subjt:  YVYISQKIVCAYFVWMSMPK-QLW

TrEMBL top hitse value%identityAlignment
A0A0A0LD14 Uncharacterized protein5.9e-4376.98Show/hide
Query:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPS---DSSEEKT-KKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS
        MAALSAGHRHFF  QS      FRNR  SPRSI++LC H+QDPS   D SEEKT KKS ERK+ + GFVQRFEKMG++LKEKLSPQRKGDWKDLTLMSLS
Subjt:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPS---DSSEEKT-KKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQLW
        FAVYVYISQKIVCAYF+WM+MPK LW
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQLW

A0A5D3BX35 Putative RNA/RNP complex-1-interacting phosphatase2.7e-4377.78Show/hide
Query:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPS---DSSEEKT-KKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS
        MAALSAGHRHFF   S     QFRNR  SPRSIA+LC H+QDPS   D S+EKT KKS ERK+ + GFVQRFEKMG++LKEKLSPQRKGDWKDLTLMSLS
Subjt:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPS---DSSEEKT-KKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQLW
        FAVYVYISQKIVCAYF+WMSMPK LW
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQLW

A0A660KVF0 Uncharacterized protein8.9e-2355.56Show/hide
Query:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPSDSSEEKTKKSPERKQKIPGFVQR----FEKMGMELKEKLSPQRKGDWKDLTLMSLS
        MAALS GH   F R+      Q   + SSP ++ L C     P DSS  +TKK   +++ +   +QR    FEK G  L+E LSP++KGDWKDLTLMSLS
Subjt:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPSDSSEEKTKKSPERKQKIPGFVQR----FEKMGMELKEKLSPQRKGDWKDLTLMSLS

Query:  FAVYVYISQKIVCAYFVWMSMPKQLW
        FAVYVYISQK+VCAYF WMSMPKQLW
Subjt:  FAVYVYISQKIVCAYFVWMSMPKQLW

A0A6J1DGN1 uncharacterized protein LOC1110203156.5e-4279.84Show/hide
Query:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPSDSSEEKTKKSPERK-QKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAV
        MAALSAGHRHFFRR     A+Q R R SSP+SI LLCRHSQDP   SEE +K+  ERK QKI GFV+RFEKMGMELKEKLSPQRKGDWKD+ LMSLSFAV
Subjt:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPSDSSEEKTKKSPERK-QKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAV

Query:  YVYISQKIVCAYFVWMSMPK-QLW
        YVYISQKIVCAYFVWMSMPK QLW
Subjt:  YVYISQKIVCAYFVWMSMPK-QLW

A0A6P9E117 uncharacterized protein LOC1183445074.0e-2355.74Show/hide
Query:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPSDSSEEKTKKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVY
        MAAL  GH   +RR       Q   + SSPR+  LL   S  P+D+S  +TKK   R+  +PG +  F K G  LKE +SPQ+KGDWKD+ LMSLSFAVY
Subjt:  MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPSDSSEEKTKKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVY

Query:  VYISQKIVCAYFVWMSMPKQLW
        VYISQKIVCAY  WMSMPKQ W
Subjt:  VYISQKIVCAYFVWMSMPKQLW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52070.1 unknown protein1.0e-1052.5Show/hide
Query:  RKQKIP----GFVQR--------FEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFVW--MSMPKQLW
        RKQK+P    G +QR          K+G  LK +   ++KGD KDL LMSLSFAVYVYISQ +VCAYF W  +S PK  W
Subjt:  RKQKIP----GFVQR--------FEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFVW--MSMPKQLW

AT3G52070.2 unknown protein8.5e-1053.25Show/hide
Query:  RKQKIP----GFVQR--------FEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFVW--MSMPK
        RKQK+P    G +QR          K+G  LK +   ++KGD KDL LMSLSFAVYVYISQ +VCAYF W  +S PK
Subjt:  RKQKIP----GFVQR--------FEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFVW--MSMPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCCTCTCCGCCGGCCACCGCCATTTCTTCCGCCGCCAAAGCGACGGCGGCGCCGAGCAATTCAGAAACAGAATCAGCAGCCCCAGGTCGATCGCCCTCCTCTG
CCGCCACAGCCAAGATCCTTCAGATTCTTCAGAAGAAAAAACAAAGAAAAGCCCAGAAAGGAAACAGAAGATTCCTGGGTTTGTTCAGAGGTTTGAGAAGATGGGAATGG
AATTGAAGGAGAAATTGAGTCCTCAGAGGAAAGGGGACTGGAAGGATTTGACATTGATGAGCTTGTCATTTGCTGTTTATGTGTATATATCTCAGAAGATTGTTTGTGCT
TATTTTGTTTGGATGTCAATGCCAAAACAACTGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCCTCTCCGCCGGCCACCGCCATTTCTTCCGCCGCCAAAGCGACGGCGGCGCCGAGCAATTCAGAAACAGAATCAGCAGCCCCAGGTCGATCGCCCTCCTCTG
CCGCCACAGCCAAGATCCTTCAGATTCTTCAGAAGAAAAAACAAAGAAAAGCCCAGAAAGGAAACAGAAGATTCCTGGGTTTGTTCAGAGGTTTGAGAAGATGGGAATGG
AATTGAAGGAGAAATTGAGTCCTCAGAGGAAAGGGGACTGGAAGGATTTGACATTGATGAGCTTGTCATTTGCTGTTTATGTGTATATATCTCAGAAGATTGTTTGTGCT
TATTTTGTTTGGATGTCAATGCCAAAACAACTGTGGTAG
Protein sequenceShow/hide protein sequence
MAALSAGHRHFFRRQSDGGAEQFRNRISSPRSIALLCRHSQDPSDSSEEKTKKSPERKQKIPGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCA
YFVWMSMPKQLW