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Spg038780 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038780
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold12:4364074..4366139
RNA-Seq ExpressionSpg038780
SyntenySpg038780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035148.1 uncharacterized protein E6C27_scaffold57G002390 [Cucumis melo var. makuwa]5.1e-3384.95Show/hide
Query:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT
        MDA A+EDIP RPRVK SF LGSE HLVN ANKGTLSEQLISMKE+SMAILK YITKHNVPNDVPDELVEE S+DDDEITEKPQ+K+KKTK+T
Subjt:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT

KAG7036645.1 hypothetical protein SDJN02_00265, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-3287.23Show/hide
Query:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDS-DDDDEITEKPQMKSKKTKLT
        MDAQAQE I   PRVKASFRLGSE HLVN ANKGTLSEQLISMKEESMAILK YITKHNVPNDVPDEL+EE S DDDDE TEKPQ+KSKKTKLT
Subjt:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDS-DDDDEITEKPQMKSKKTKLT

TYK29223.1 uncharacterized protein E5676_scaffold1228G00090 [Cucumis melo var. makuwa]5.1e-3384.95Show/hide
Query:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT
        MDA A+EDIP RPRVK SF LGSE HLVN ANKGTLSEQLISMKE+SMAILK YITKHNVPNDVPDELVEE S+DDDEITEKPQ+K+KKTK+T
Subjt:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT

XP_008443784.1 PREDICTED: uncharacterized protein LOC103487289 [Cucumis melo]5.1e-3384.95Show/hide
Query:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT
        MDA A+EDIP RPRVK SF LGSE HLVN ANKGTLSEQLISMKE+SMAILK YITKHNVPNDVPDELVEE S+DDDEITEKPQ+K+KKTK+T
Subjt:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT

XP_011660264.1 uncharacterized protein LOC105436354 [Cucumis sativus]1.9e-3283.87Show/hide
Query:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT
        MDA A+EDIP RPRVK S  LGSETHLVN ANKGTLSEQL SMKE+SMAILK YITKHNVPNDVPDELVEE S+DDDEITEKPQ+K+KKTK+T
Subjt:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT

TrEMBL top hitse value%identityAlignment
A0A0A0M0V3 Uncharacterized protein9.4e-3383.87Show/hide
Query:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT
        MDA A+EDIP RPRVK S  LGSETHLVN ANKGTLSEQL SMKE+SMAILK YITKHNVPNDVPDELVEE S+DDDEITEKPQ+K+KKTK+T
Subjt:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT

A0A1S3B8U1 uncharacterized protein LOC1034872892.5e-3384.95Show/hide
Query:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT
        MDA A+EDIP RPRVK SF LGSE HLVN ANKGTLSEQLISMKE+SMAILK YITKHNVPNDVPDELVEE S+DDDEITEKPQ+K+KKTK+T
Subjt:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT

A0A5A7SX16 Uncharacterized protein2.5e-3384.95Show/hide
Query:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT
        MDA A+EDIP RPRVK SF LGSE HLVN ANKGTLSEQLISMKE+SMAILK YITKHNVPNDVPDELVEE S+DDDEITEKPQ+K+KKTK+T
Subjt:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT

A0A5D3DZN8 Uncharacterized protein2.5e-3384.95Show/hide
Query:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT
        MDA A+EDIP RPRVK SF LGSE HLVN ANKGTLSEQLISMKE+SMAILK YITKHNVPNDVPDELVEE S+DDDEITEKPQ+K+KKTK+T
Subjt:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT

A0A6J1G9M3 uncharacterized protein LOC1114520652.1e-3287.23Show/hide
Query:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDS-DDDDEITEKPQMKSKKTKLT
        MDAQAQE I   PRVKASFRLGSE HLVN ANKGTLSEQLISMKEESMAILK YITKHNVPNDVPDEL+EE S DDDDE TEKPQ+KSKKTKLT
Subjt:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDS-DDDDEITEKPQMKSKKTKLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G47820.1 unknown protein9.7e-1441.67Show/hide
Query:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVP-NDVPDELVEEDSDDDDEITEK---PQMKSKKTKL
        M+ ++   +P +  VK  F+LG+E++ ++     T+ +QL+SMKEESM ILK +ITKHNVP +DVPD+++ +D + DD+       P    KKTK+
Subjt:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVP-NDVPDELVEEDSDDDDEITEK---PQMKSKKTKL

AT1G47820.2 unknown protein9.7e-1441.67Show/hide
Query:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVP-NDVPDELVEEDSDDDDEITEK---PQMKSKKTKL
        M+ ++   +P +  VK  F+LG+E++ ++     T+ +QL+SMKEESM ILK +ITKHNVP +DVPD+++ +D + DD+       P    KKTK+
Subjt:  MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVP-NDVPDELVEEDSDDDDEITEK---PQMKSKKTKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCCCAAGCTCAAGAAGATATTCCTCCAAGGCCTCGAGTTAAGGCCTCATTTCGCTTAGGGTCAGAGACACATTTGGTCAATATAGCTAATAAAGGCACTCTCTC
AGAGCAGTTGATTTCTATGAAAGAGGAGAGCATGGCTATTTTGAAGGGTTACATAACCAAACACAATGTTCCTAACGACGTGCCAGACGAACTAGTTGAAGAAGATTCCG
ATGACGATGATGAAATCACTGAAAAGCCTCAAATGAAGTCCAAGAAGACAAAATTAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCCCAAGCTCAAGAAGATATTCCTCCAAGGCCTCGAGTTAAGGCCTCATTTCGCTTAGGGTCAGAGACACATTTGGTCAATATAGCTAATAAAGGCACTCTCTC
AGAGCAGTTGATTTCTATGAAAGAGGAGAGCATGGCTATTTTGAAGGGTTACATAACCAAACACAATGTTCCTAACGACGTGCCAGACGAACTAGTTGAAGAAGATTCCG
ATGACGATGATGAAATCACTGAAAAGCCTCAAATGAAGTCCAAGAAGACAAAATTAACTTAA
Protein sequenceShow/hide protein sequence
MDAQAQEDIPPRPRVKASFRLGSETHLVNIANKGTLSEQLISMKEESMAILKGYITKHNVPNDVPDELVEEDSDDDDEITEKPQMKSKKTKLT