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Spg038795 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038795
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein AAR2 homolog
Genome locationscaffold12:3062465..3066969
RNA-Seq ExpressionSpg038795
SyntenySpg038795
Gene Ontology termsNA
InterPro domainsIPR007946 - A1 cistron-splicing factor, AAR2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457081.1 PREDICTED: protein AAR2 homolog isoform X1 [Cucumis melo]7.5e-4587.16Show/hide
Query:  FIKVIYHQLKFGLEKDHSHDTAGSSTIL-DESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQNIATDRMSFDEDDEFAPVV
        FIKVIYHQLKFGLEKD S+D AGSS+IL DESWFSADSFL+HLCKDFFSLVLEAPVVDGDLLTWTRKLKELLEN LGWKF NIATD +SFDEDDEFAPVV
Subjt:  FIKVIYHQLKFGLEKDHSHDTAGSSTIL-DESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQNIATDRMSFDEDDEFAPVV

Query:  EMLDDSELS
          LD+SE S
Subjt:  EMLDDSELS

XP_008457082.1 PREDICTED: protein AAR2 homolog isoform X2 [Cucumis melo]2.0e-4586.49Show/hide
Query:  EVFIKVIYHQLKFGLEKDHSHDTAGSSTIL-DESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQNIATDRMSFDEDDEFAP
        E FIKVIYHQLKFGLEKD S+D AGSS+IL DESWFSADSFL+HLCKDFFSLVLEAPVVDGDLLTWTRKLKELLEN LGWKF NIATD +SFDEDDEFAP
Subjt:  EVFIKVIYHQLKFGLEKDHSHDTAGSSTIL-DESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQNIATDRMSFDEDDEFAP

Query:  VVEMLDDSELS
        VV  LD+SE S
Subjt:  VVEMLDDSELS

XP_011660184.2 protein AAR2 homolog isoform X2 [Cucumis sativus]2.2e-4486.24Show/hide
Query:  FIKVIYHQLKFGLEKDHSHDTAGSSTI-LDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQNIATDRMSFDEDDEFAPVV
        FIKVIYHQLKFGLEKD S+D AGSS+I LDESWFSADSFL+HLCKDFFSLVLEAPVVDGDLLTWTRKLKELLEN LGWKFQNIA D +SFDEDDEFAPVV
Subjt:  FIKVIYHQLKFGLEKDHSHDTAGSSTI-LDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQNIATDRMSFDEDDEFAPVV

Query:  EMLDDSELS
          +DDS  S
Subjt:  EMLDDSELS

XP_022143390.1 protein AAR2 homolog isoform X1 [Momordica charantia]1.3e-4486.49Show/hide
Query:  FIKVIYHQLKFGLEKDHSHDT---AGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQ-NIATDRMSFDEDDEFA
        FIKVIYHQLK+GLEKD+S+ T   AGSSTILDESWFSADSFLYHLCKDFFSLV EAPVVDGDLLTWTRKL+EL EN LGWKFQ NIATD + FDEDDEFA
Subjt:  FIKVIYHQLKFGLEKDHSHDT---AGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQ-NIATDRMSFDEDDEFA

Query:  PVVEMLDDSEL
        PVVEMLDDSEL
Subjt:  PVVEMLDDSEL

XP_022143391.1 protein AAR2 homolog isoform X2 [Momordica charantia]1.3e-4486.49Show/hide
Query:  FIKVIYHQLKFGLEKDHSHDT---AGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQ-NIATDRMSFDEDDEFA
        FIKVIYHQLK+GLEKD+S+ T   AGSSTILDESWFSADSFLYHLCKDFFSLV EAPVVDGDLLTWTRKL+EL EN LGWKFQ NIATD + FDEDDEFA
Subjt:  FIKVIYHQLKFGLEKDHSHDT---AGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQ-NIATDRMSFDEDDEFA

Query:  PVVEMLDDSEL
        PVVEMLDDSEL
Subjt:  PVVEMLDDSEL

TrEMBL top hitse value%identityAlignment
A0A0A0M0D1 Uncharacterized protein1.1e-4486.24Show/hide
Query:  FIKVIYHQLKFGLEKDHSHDTAGSSTI-LDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQNIATDRMSFDEDDEFAPVV
        FIKVIYHQLKFGLEKD S+D AGSS+I LDESWFSADSFL+HLCKDFFSLVLEAPVVDGDLLTWTRKLKELLEN LGWKFQNIA D +SFDEDDEFAPVV
Subjt:  FIKVIYHQLKFGLEKDHSHDTAGSSTI-LDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQNIATDRMSFDEDDEFAPVV

Query:  EMLDDSELS
          +DDS  S
Subjt:  EMLDDSELS

A0A1S3C5D7 protein AAR2 homolog isoform X13.6e-4587.16Show/hide
Query:  FIKVIYHQLKFGLEKDHSHDTAGSSTIL-DESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQNIATDRMSFDEDDEFAPVV
        FIKVIYHQLKFGLEKD S+D AGSS+IL DESWFSADSFL+HLCKDFFSLVLEAPVVDGDLLTWTRKLKELLEN LGWKF NIATD +SFDEDDEFAPVV
Subjt:  FIKVIYHQLKFGLEKDHSHDTAGSSTIL-DESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQNIATDRMSFDEDDEFAPVV

Query:  EMLDDSELS
          LD+SE S
Subjt:  EMLDDSELS

A0A1S3C5Z9 protein AAR2 homolog isoform X29.5e-4686.49Show/hide
Query:  EVFIKVIYHQLKFGLEKDHSHDTAGSSTIL-DESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQNIATDRMSFDEDDEFAP
        E FIKVIYHQLKFGLEKD S+D AGSS+IL DESWFSADSFL+HLCKDFFSLVLEAPVVDGDLLTWTRKLKELLEN LGWKF NIATD +SFDEDDEFAP
Subjt:  EVFIKVIYHQLKFGLEKDHSHDTAGSSTIL-DESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQNIATDRMSFDEDDEFAP

Query:  VVEMLDDSELS
        VV  LD+SE S
Subjt:  VVEMLDDSELS

A0A6J1CNP0 protein AAR2 homolog isoform X16.2e-4586.49Show/hide
Query:  FIKVIYHQLKFGLEKDHSHDT---AGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQ-NIATDRMSFDEDDEFA
        FIKVIYHQLK+GLEKD+S+ T   AGSSTILDESWFSADSFLYHLCKDFFSLV EAPVVDGDLLTWTRKL+EL EN LGWKFQ NIATD + FDEDDEFA
Subjt:  FIKVIYHQLKFGLEKDHSHDT---AGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQ-NIATDRMSFDEDDEFA

Query:  PVVEMLDDSEL
        PVVEMLDDSEL
Subjt:  PVVEMLDDSEL

A0A6J1CQ50 protein AAR2 homolog isoform X26.2e-4586.49Show/hide
Query:  FIKVIYHQLKFGLEKDHSHDT---AGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQ-NIATDRMSFDEDDEFA
        FIKVIYHQLK+GLEKD+S+ T   AGSSTILDESWFSADSFLYHLCKDFFSLV EAPVVDGDLLTWTRKL+EL EN LGWKFQ NIATD + FDEDDEFA
Subjt:  FIKVIYHQLKFGLEKDHSHDT---AGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQ-NIATDRMSFDEDDEFA

Query:  PVVEMLDDSEL
        PVVEMLDDSEL
Subjt:  PVVEMLDDSEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66510.1 AAR2 protein family1.2e-3566.04Show/hide
Query:  FIKVIYHQLKFGLEKDHSHDTAGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQ-NIATDRMSFDEDDEFAPVV
        FIKVIYHQLK+GL+K++S    G   +LD+SW ++DSFL+ LCKDFF+LV E  VVDGDLL+WTRK KELLEN LGW+FQ   A D + F+EDDE+APVV
Subjt:  FIKVIYHQLKFGLEKDHSHDTAGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQ-NIATDRMSFDEDDEFAPVV

Query:  EMLDDS
        EMLD+S
Subjt:  EMLDDS

AT1G66510.2 AAR2 protein family1.2e-3566.04Show/hide
Query:  FIKVIYHQLKFGLEKDHSHDTAGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQ-NIATDRMSFDEDDEFAPVV
        FIKVIYHQLK+GL+K++S    G   +LD+SW ++DSFL+ LCKDFF+LV E  VVDGDLL+WTRK KELLEN LGW+FQ   A D + F+EDDE+APVV
Subjt:  FIKVIYHQLKFGLEKDHSHDTAGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQ-NIATDRMSFDEDDEFAPVV

Query:  EMLDDS
        EMLD+S
Subjt:  EMLDDS

AT1G66510.3 AAR2 protein family1.2e-3566.04Show/hide
Query:  FIKVIYHQLKFGLEKDHSHDTAGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQ-NIATDRMSFDEDDEFAPVV
        FIKVIYHQLK+GL+K++S    G   +LD+SW ++DSFL+ LCKDFF+LV E  VVDGDLL+WTRK KELLEN LGW+FQ   A D + F+EDDE+APVV
Subjt:  FIKVIYHQLKFGLEKDHSHDTAGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQ-NIATDRMSFDEDDEFAPVV

Query:  EMLDDS
        EMLD+S
Subjt:  EMLDDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGTTTTAGCACATATGTTGGTGAGGTCTTCATTAAGGTCATCTACCATCAATTGAAGTTTGGATTAGAGAAGGATCATTCTCATGACACAGCAGGATCATCAAC
AATATTGGATGAATCGTGGTTTTCTGCTGATAGTTTCTTATATCATCTATGTAAGGATTTCTTTTCATTGGTGCTAGAGGCTCCAGTTGTTGATGGGGATCTTCTAACAT
GGACAAGGAAACTCAAGGAACTGTTAGAGAACAGTCTGGGCTGGAAATTCCAGAACATTGCAACTGATAGAATGTCCTTCGATGAAGATGATGAGTTTGCTCCTGTAGTT
GAGATGCTGGATGATTCTGAGTTGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCGTTTTAGCACATATGTTGGTGAGGTCTTCATTAAGGTCATCTACCATCAATTGAAGTTTGGATTAGAGAAGGATCATTCTCATGACACAGCAGGATCATCAAC
AATATTGGATGAATCGTGGTTTTCTGCTGATAGTTTCTTATATCATCTATGTAAGGATTTCTTTTCATTGGTGCTAGAGGCTCCAGTTGTTGATGGGGATCTTCTAACAT
GGACAAGGAAACTCAAGGAACTGTTAGAGAACAGTCTGGGCTGGAAATTCCAGAACATTGCAACTGATAGAATGTCCTTCGATGAAGATGATGAGTTTGCTCCTGTAGTT
GAGATGCTGGATGATTCTGAGTTGTCATGA
Protein sequenceShow/hide protein sequence
MDRFSTYVGEVFIKVIYHQLKFGLEKDHSHDTAGSSTILDESWFSADSFLYHLCKDFFSLVLEAPVVDGDLLTWTRKLKELLENSLGWKFQNIATDRMSFDEDDEFAPVV
EMLDDSELS