; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038798 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038798
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionElongation factor Ts, mitochondrial
Genome locationscaffold12:3195274..3196311
RNA-Seq ExpressionSpg038798
SyntenySpg038798
Gene Ontology termsGO:0070125 - mitochondrial translational elongation (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsIPR001816 - Translation elongation factor EFTs/EF1B
IPR014039 - Translation elongation factor EFTs/EF1B, dimerisation
IPR018101 - Translation elongation factor Ts, conserved site
IPR036402 - Elongation factor Ts, dimerisation domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036692.1 Elongation factor Ts, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-5271.35Show/hide
Query:  KLLNAGMAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------
        K +NAGMAFCRAAKRSLGF ISNRLLN +S+HGFSSS T RAFVV+GV+ G SVP+  DA S L+SRLSLLRRFSVETPA SDQM               
Subjt:  KLLNAGMAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------

Query:  -------------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL
                     +AAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAV+IELNCETDFVARNEIFQYL
Subjt:  -------------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL

XP_022143336.1 elongation factor Ts, mitochondrial [Momordica charantia]1.2e-5071.52Show/hide
Query:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------
        MAFCRAAKRSLGFVISNRL+N +S+H FSS ATNR FVVEGV+ GSSVPF+H   S LN +LSLLRRFSVETPAGSDQM                     
Subjt:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------

Query:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL
               +AAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAV++ELNCETDFVARNEIFQYL
Subjt:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL

XP_022949489.1 elongation factor Ts, mitochondrial-like [Cucurbita moschata]1.6e-5072.12Show/hide
Query:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------
        MAFCRAAKRSLGFVISNRLLN +S+HGFSSS T RAFVV+GV+ G SVP+  DA S L+SRLSLLRRFSVETPA SDQM                     
Subjt:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------

Query:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL
               +AAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAV+IELNCETDFVARNEIFQYL
Subjt:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL

XP_022997954.1 elongation factor Ts, mitochondrial-like [Cucurbita maxima]1.2e-5072.12Show/hide
Query:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------
        MAFCRAAKRSLGFVISNRLLN + +HGFSSS T RAFVV+GV+ G SVP+  DANS L+SRLSLLRRFSVETPA SDQM                     
Subjt:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------

Query:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL
               +AAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAV+IELNCETDFVARNEIFQYL
Subjt:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL

XP_023525844.1 elongation factor Ts, mitochondrial-like [Cucurbita pepo subsp. pepo]1.6e-5072.12Show/hide
Query:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------
        MAFCRAAKRSLGFVISNRLLN +S+HGFSSS T RAFVV+GVR G SVP+  DA S L+SRLSLLRRFSVETPA SDQM                     
Subjt:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------

Query:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL
               +AAQTELRKRGKVLALKKSSRTAAEGLLALAQNET+AV+IELNCETDFVARNEIFQYL
Subjt:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL

TrEMBL top hitse value%identityAlignment
A0A1S3C4R6 Elongation factor Ts, mitochondrial1.4e-4969.09Show/hide
Query:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------
        MAFCRA KRS+G +ISN LLN +++HGFSS ATN+ FVVEGV+ GSSVP+ HDANS + SRLSLLRRFSVETP GSDQM                     
Subjt:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------

Query:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL
               +AAQTELRKRGKVLALKKS+RTAAEGLLALAQNETKAV+IELNCETDFVARNEIFQYL
Subjt:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL

A0A5A7U195 Elongation factor Ts, mitochondrial1.4e-4969.09Show/hide
Query:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------
        MAFCRA KRS+G +ISN LLN +++HGFSS ATN+ FVVEGV+ GSSVP+ HDANS + SRLSLLRRFSVETP GSDQM                     
Subjt:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------

Query:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL
               +AAQTELRKRGKVLALKKS+RTAAEGLLALAQNETKAV+IELNCETDFVARNEIFQYL
Subjt:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL

A0A6J1CPZ8 Elongation factor Ts, mitochondrial5.8e-5171.52Show/hide
Query:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------
        MAFCRAAKRSLGFVISNRL+N +S+H FSS ATNR FVVEGV+ GSSVPF+H   S LN +LSLLRRFSVETPAGSDQM                     
Subjt:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------

Query:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL
               +AAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAV++ELNCETDFVARNEIFQYL
Subjt:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL

A0A6J1GCZ3 Elongation factor Ts, mitochondrial7.5e-5172.12Show/hide
Query:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------
        MAFCRAAKRSLGFVISNRLLN +S+HGFSSS T RAFVV+GV+ G SVP+  DA S L+SRLSLLRRFSVETPA SDQM                     
Subjt:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------

Query:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL
               +AAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAV+IELNCETDFVARNEIFQYL
Subjt:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL

A0A6J1KCZ7 Elongation factor Ts, mitochondrial5.8e-5172.12Show/hide
Query:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------
        MAFCRAAKRSLGFVISNRLLN + +HGFSSS T RAFVV+GV+ G SVP+  DANS L+SRLSLLRRFSVETPA SDQM                     
Subjt:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQM---------------------

Query:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL
               +AAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAV+IELNCETDFVARNEIFQYL
Subjt:  -------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL

SwissProt top hitse value%identityAlignment
B4FHF0 Elongation factor Ts, mitochondrial3.1e-1742.57Show/hide
Query:  MAFCRAAKRS---LGFVISNRLLNKSSQHGFSSSATNRAFVVEGV---RCGSSVPFAHDANSV--LNSRLSL-LRRFSVETPAGSDQMKAAQTELRKRGK
        MA+ + AKRS   L F   ++     S   F +   +     +GV   R GS V  +   N +  L  R S  ++         +  ++AAQ +LRKRG 
Subjt:  MAFCRAAKRS---LGFVISNRLLNKSSQHGFSSSATNRAFVVEGV---RCGSSVPFAHDANSV--LNSRLSL-LRRFSVETPAGSDQMKAAQTELRKRGK

Query:  VLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYLVS
         LA KKSSRTAAEGLLA+AQ++ +A ++ELNCETDFVARN++FQYL S
Subjt:  VLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYLVS

B8BAI9 Elongation factor Ts, mitochondrial1.9e-1951.28Show/hide
Query:  AHDANSVLNSRLSLLRRFSVETPAGSDQMK----------------------------AAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELN
        AH ++S ++   +LLRRFS E PA S+QM                             AAQ +LRKRG VLA KKSSRTAAEGLLA+AQ+E +A ++ELN
Subjt:  AHDANSVLNSRLSLLRRFSVETPAGSDQMK----------------------------AAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELN

Query:  CETDFVARNEIFQYLVS
        CETDFVARN++FQYL S
Subjt:  CETDFVARNEIFQYLVS

B9SEZ6 Elongation factor Ts, mitochondrial3.1e-1743.33Show/hide
Query:  MAFCRAAKRSLGFVISNRLLNKSSQHG--FSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQMK-----------AAQTELR
        MA  R A+R L  ++ +RL N    +       A+  AF +      +  P A +       ++SL+++    T A    +K           AAQ +LR
Subjt:  MAFCRAAKRSLGFVISNRLLNKSSQHG--FSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVETPAGSDQMK-----------AAQTELR

Query:  KRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL
        KRGKVLA KKS R A EGLLALAQNE KA +IELNCETDFVARN+IFQ L
Subjt:  KRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL

Q5XF75 Elongation factor Ts, mitochondrial5.1e-2044.58Show/hide
Query:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVET-PAGSDQM--------------------
        MAF RA +R +G    +     SS + +S+ A+    + +     SSVP  +   S++    + +R FS E  PA SDQM                    
Subjt:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVET-PAGSDQM--------------------

Query:  --------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL
                +AAQ +LRKRGKVLA KKSSRTAAEG+LA+AQNE K  +IELNCETDFVARNEIFQYL
Subjt:  --------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL

Q6ZJS7 Elongation factor Ts, mitochondrial5.6e-1950.43Show/hide
Query:  AHDANSVLNSRLSLLRRFSVETPAGSDQMK----------------------------AAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELN
        AH ++S ++   +LLRRFS E PA S+QM                              AQ +LRKRG VLA KKSSRTAAEGLLA+AQ+E +A ++ELN
Subjt:  AHDANSVLNSRLSLLRRFSVETPAGSDQMK----------------------------AAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELN

Query:  CETDFVARNEIFQYLVS
        CETDFVARN++FQYL S
Subjt:  CETDFVARNEIFQYLVS

Arabidopsis top hitse value%identityAlignment
AT4G11120.1 translation elongation factor Ts (EF-Ts), putative3.6e-2144.58Show/hide
Query:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVET-PAGSDQM--------------------
        MAF RA +R +G    +     SS + +S+ A+    + +     SSVP  +   S++    + +R FS E  PA SDQM                    
Subjt:  MAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSSVPFAHDANSVLNSRLSLLRRFSVET-PAGSDQM--------------------

Query:  --------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL
                +AAQ +LRKRGKVLA KKSSRTAAEG+LA+AQNE K  +IELNCETDFVARNEIFQYL
Subjt:  --------KAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYL

AT4G29060.1 elongation factor Ts family protein1.5e-0636.08Show/hide
Query:  ANSVLNSRLSLLRRFSVETPAG-----------SDQMKAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETK-AVIIELNCETDFVARNEIFQYLV
        A S+     +L+++   ET AG              M  AQ  LRK+G   A KK+SR  +EG +    ++++  V++E+NCETDFV+R +IF+ LV
Subjt:  ANSVLNSRLSLLRRFSVETPAG-----------SDQMKAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETK-AVIIELNCETDFVARNEIFQYLV

AT4G29060.2 elongation factor Ts family protein1.5e-0636.08Show/hide
Query:  ANSVLNSRLSLLRRFSVETPAG-----------SDQMKAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETK-AVIIELNCETDFVARNEIFQYLV
        A S+     +L+++   ET AG              M  AQ  LRK+G   A KK+SR  +EG +    ++++  V++E+NCETDFV+R +IF+ LV
Subjt:  ANSVLNSRLSLLRRFSVETPAG-----------SDQMKAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETK-AVIIELNCETDFVARNEIFQYLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCCCAAAACGTTCGGATTTCATCAATTCAAAGCCCAATCAACAACCCTCTGTTTTCCCTACTTTCCAACACCATCATTCCATTTCAATTTCAAGCTTCAGTTCA
AGCTTCAGTTAATCTCTCCAAACAAGCAGAAAACTGGAAAATTTTCGTTTGTATCATCGGAAAGCTGTTGAATGCTGGAATGGCGTTTTGTAGAGCTGCAAAACGTTCCC
TCGGATTTGTGATTTCTAACAGGCTGCTGAACAAGTCAAGTCAGCATGGGTTTTCCAGTTCCGCTACCAATAGGGCATTTGTTGTTGAAGGCGTTCGATGTGGAAGTTCA
GTTCCCTTCGCTCATGATGCTAATTCTGTTCTTAATTCGAGACTTAGTCTCTTGAGAAGATTTAGTGTCGAAACACCTGCTGGTTCGGACCAGATGAAAGCAGCACAGAC
GGAACTGAGAAAAAGAGGGAAGGTGCTGGCCCTGAAAAAGTCTTCTCGAACTGCTGCTGAGGGCCTCCTTGCCTTGGCTCAAAATGAAACCAAAGCTGTTATTATTGAAC
TCAACTGCGAGACTGACTTTGTTGCTAGGAACGAGATTTTTCAATACTTGGTAAGCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCCCAAAACGTTCGGATTTCATCAATTCAAAGCCCAATCAACAACCCTCTGTTTTCCCTACTTTCCAACACCATCATTCCATTTCAATTTCAAGCTTCAGTTCA
AGCTTCAGTTAATCTCTCCAAACAAGCAGAAAACTGGAAAATTTTCGTTTGTATCATCGGAAAGCTGTTGAATGCTGGAATGGCGTTTTGTAGAGCTGCAAAACGTTCCC
TCGGATTTGTGATTTCTAACAGGCTGCTGAACAAGTCAAGTCAGCATGGGTTTTCCAGTTCCGCTACCAATAGGGCATTTGTTGTTGAAGGCGTTCGATGTGGAAGTTCA
GTTCCCTTCGCTCATGATGCTAATTCTGTTCTTAATTCGAGACTTAGTCTCTTGAGAAGATTTAGTGTCGAAACACCTGCTGGTTCGGACCAGATGAAAGCAGCACAGAC
GGAACTGAGAAAAAGAGGGAAGGTGCTGGCCCTGAAAAAGTCTTCTCGAACTGCTGCTGAGGGCCTCCTTGCCTTGGCTCAAAATGAAACCAAAGCTGTTATTATTGAAC
TCAACTGCGAGACTGACTTTGTTGCTAGGAACGAGATTTTTCAATACTTGGTAAGCTTTTGA
Protein sequenceShow/hide protein sequence
MEAQNVRISSIQSPINNPLFSLLSNTIIPFQFQASVQASVNLSKQAENWKIFVCIIGKLLNAGMAFCRAAKRSLGFVISNRLLNKSSQHGFSSSATNRAFVVEGVRCGSS
VPFAHDANSVLNSRLSLLRRFSVETPAGSDQMKAAQTELRKRGKVLALKKSSRTAAEGLLALAQNETKAVIIELNCETDFVARNEIFQYLVSF