CuGenDBv2

Gene ID	Spg038807
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	AUGMIN subunit 8
Genome location	scaffold12:966420..967351
RNA-Seq Expression	Spg038807
Synteny	Spg038807
Gene Ontology terms	GO:0009987 - cellular process (biological process) GO:0005737 - cytoplasm (cellular component) GO:0043231 - intracellular membrane-bounded organelle (cellular component) GO:0005488 - binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0056115.1 AUGMIN subunit 8 [Cucumis melo var. makuwa]

9.2e-48

57.8

Show/hide

Query:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLMA------------------------------CIYPACG
        KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N + +  L                                 I  + G
Subjt:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLMA------------------------------CIYPACG

Query:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS
        P+ GIGLSSLRRTSSDSMNKLFQ+SNND TR ILPLDDGLRME   NSV++C LQA GIP+LA NGL DRLK T A+RSQSL   GS LPSPI++S+P +
Subjt:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS

Query:  SVSRESSPARPRPSTPPP
        SVSR SSP RPR STPPP
Subjt:  SVSRESSPARPRPSTPPP

TYJ96402.1 AUGMIN subunit 8 [Cucumis melo var. makuwa]

9.2e-48

57.8

Show/hide

Query:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLMA------------------------------CIYPACG
        KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N + +  L                                 I  + G
Subjt:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLMA------------------------------CIYPACG

Query:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS
        P+ GIGLSSLRRTSSDSMNKLFQ+SNND TR ILPLDDGLRME   NSV++C LQA GIP+LA NGL DRLK T A+RSQSL   GS LPSPI++S+P +
Subjt:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS

Query:  SVSRESSPARPRPSTPPP
        SVSR SSP RPR STPPP
Subjt:  SVSRESSPARPRPSTPPP

XP_004144793.1 AUGMIN subunit 8 [Cucumis sativus]

1.3e-46

56.88

Show/hide

Query:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLM------------------------------ACIYPACG
        KEKPVP SPS+RTLR SSNFAH  +E PMVS+KPTPER+   LK +     L N + +  L                                 I  + G
Subjt:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLM------------------------------ACIYPACG

Query:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS
        P+ GIGLSSLRRTSSDSMNKLFQ+SNND  + ILPLDDGLRME+  NSV+DC LQA GIP+LA N L DR K T A+RSQSL    S LPSPI+TSVP +
Subjt:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS

Query:  SVSRESSPARPRPSTPPP
        SVSR SSP RPRPSTPPP
Subjt:  SVSRESSPARPRPSTPPP

XP_008452644.1 PREDICTED: AUGMIN subunit 8 [Cucumis melo]

9.2e-48

57.8

Show/hide

Query:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLMA------------------------------CIYPACG
        KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N + +  L                                 I  + G
Subjt:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLMA------------------------------CIYPACG

Query:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS
        P+ GIGLSSLRRTSSDSMNKLFQ+SNND TR ILPLDDGLRME   NSV++C LQA GIP+LA NGL DRLK T A+RSQSL   GS LPSPI++S+P +
Subjt:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS

Query:  SVSRESSPARPRPSTPPP
        SVSR SSP RPR STPPP
Subjt:  SVSRESSPARPRPSTPPP

XP_022999608.1 AUGMIN subunit 8-like isoform X6 [Cucurbita maxima]

6.4e-49

59.91

Show/hide

Query:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTN--------WRILSQLMA---------------------CIYPACGP
        KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N         R++ Q  A                      I  + GP
Subjt:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTN--------WRILSQLMA---------------------CIYPACGP

Query:  VSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLSS
        + GIGL SLRRTSSDS+NKL  +SNNDS++ ILPLDDGLRME+G NSVDDC LQA G P+LA NGL DRLKST A+RSQSL   G  LPSPI+TSVP SS
Subjt:  VSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLSS

Query:  VSRESSPARPRPSTPPP
        VSR SSPARPRPSTPPP
Subjt:  VSRESSPARPRPSTPPP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ41 Uncharacterized protein

6.5e-47

56.88

Show/hide

Query:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLM------------------------------ACIYPACG
        KEKPVP SPS+RTLR SSNFAH  +E PMVS+KPTPER+   LK +     L N + +  L                                 I  + G
Subjt:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLM------------------------------ACIYPACG

Query:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS
        P+ GIGLSSLRRTSSDSMNKLFQ+SNND  + ILPLDDGLRME+  NSV+DC LQA GIP+LA N L DR K T A+RSQSL    S LPSPI+TSVP +
Subjt:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS

Query:  SVSRESSPARPRPSTPPP
        SVSR SSP RPRPSTPPP
Subjt:  SVSRESSPARPRPSTPPP

A0A1S3BTT6 AUGMIN subunit 8

4.5e-48

57.8

Show/hide

Query:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLMA------------------------------CIYPACG
        KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N + +  L                                 I  + G
Subjt:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLMA------------------------------CIYPACG

Query:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS
        P+ GIGLSSLRRTSSDSMNKLFQ+SNND TR ILPLDDGLRME   NSV++C LQA GIP+LA NGL DRLK T A+RSQSL   GS LPSPI++S+P +
Subjt:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS

Query:  SVSRESSPARPRPSTPPP
        SVSR SSP RPR STPPP
Subjt:  SVSRESSPARPRPSTPPP

A0A5A7UR59 Translation initiation factor IF-3

4.5e-48

57.8

Show/hide

Query:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLMA------------------------------CIYPACG
        KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N + +  L                                 I  + G
Subjt:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLMA------------------------------CIYPACG

Query:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS
        P+ GIGLSSLRRTSSDSMNKLFQ+SNND TR ILPLDDGLRME   NSV++C LQA GIP+LA NGL DRLK T A+RSQSL   GS LPSPI++S+P +
Subjt:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS

Query:  SVSRESSPARPRPSTPPP
        SVSR SSP RPR STPPP
Subjt:  SVSRESSPARPRPSTPPP

A0A5D3B959 AUGMIN subunit 8

4.5e-48

57.8

Show/hide

Query:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLMA------------------------------CIYPACG
        KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N + +  L                                 I  + G
Subjt:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTNWRILSQLMA------------------------------CIYPACG

Query:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS
        P+ GIGLSSLRRTSSDSMNKLFQ+SNND TR ILPLDDGLRME   NSV++C LQA GIP+LA NGL DRLK T A+RSQSL   GS LPSPI++S+P +
Subjt:  PVSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLS

Query:  SVSRESSPARPRPSTPPP
        SVSR SSP RPR STPPP
Subjt:  SVSRESSPARPRPSTPPP

A0A6J1KK70 AUGMIN subunit 8-like isoform X6

3.1e-49

59.91

Show/hide

Query:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTN--------WRILSQLMA---------------------CIYPACGP
        KEKPVP SPS+RTLR SSNFAH  VE PMVS+KPTPER+   LK +     L N         R++ Q  A                      I  + GP
Subjt:  KEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMC---LTN--------WRILSQLMA---------------------CIYPACGP

Query:  VSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLSS
        + GIGL SLRRTSSDS+NKL  +SNNDS++ ILPLDDGLRME+G NSVDDC LQA G P+LA NGL DRLKST A+RSQSL   G  LPSPI+TSVP SS
Subjt:  VSGIGLSSLRRTSSDSMNKLFQKSNNDSTRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLSS

Query:  VSRESSPARPRPSTPPP
        VSR SSPARPRPSTPPP
Subjt:  VSRESSPARPRPSTPPP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G30710.1 Family of unknown function (DUF566)

1.3e-04

29.77

Show/hide

Query:  KEKPVPVSPSNRTLRTSSNFAHS-QVEMPMVSKKPTPERREILLKERMCLTNWRILSQLMACIYPACGPVSGIGLSSLR-------RTSSDSMNKLFQKS
        KE+PV  S  +RTLR SSN A   + E   VS+KPTPER+   LK +        +S L     P  GP S + +   R       + +S+S+N+     
Subjt:  KEKPVPVSPSNRTLRTSSNFAHS-QVEMPMVSKKPTPERREILLKERMCLTNWRILSQLMACIYPACGPVSGIGLSSLR-------RTSSDSMNKLFQKS

Query:  NNDS--------------TRIILPLDDGLR--------------MENGRNSVDDCPLQALGIPKLAFNGLLDRLK-STLAIRSQSLPSLGSPLPSPIKTS
        +  S               R+ LPL    R              + +   S D+   +  G  +L   G LDR   +T   R   LP+ GS   SP +TS
Subjt:  NNDS--------------TRIILPLDDGLR--------------MENGRNSVDDCPLQALGIPKLAFNGLLDRLK-STLAIRSQSLPSLGSPLPSPIKTS

Query:  -VPLSSVSRESSPAR
         +  SS+SR  S +R
Subjt:  -VPLSSVSRESSPAR

AT4G30710.2 Family of unknown function (DUF566)

1.3e-04

29.77

Show/hide

Query:  KEKPVPVSPSNRTLRTSSNFAHS-QVEMPMVSKKPTPERREILLKERMCLTNWRILSQLMACIYPACGPVSGIGLSSLR-------RTSSDSMNKLFQKS
        KE+PV  S  +RTLR SSN A   + E   VS+KPTPER+   LK +        +S L     P  GP S + +   R       + +S+S+N+     
Subjt:  KEKPVPVSPSNRTLRTSSNFAHS-QVEMPMVSKKPTPERREILLKERMCLTNWRILSQLMACIYPACGPVSGIGLSSLR-------RTSSDSMNKLFQKS

Query:  NNDS--------------TRIILPLDDGLR--------------MENGRNSVDDCPLQALGIPKLAFNGLLDRLK-STLAIRSQSLPSLGSPLPSPIKTS
        +  S               R+ LPL    R              + +   S D+   +  G  +L   G LDR   +T   R   LP+ GS   SP +TS
Subjt:  NNDS--------------TRIILPLDDGLR--------------MENGRNSVDDCPLQALGIPKLAFNGLLDRLK-STLAIRSQSLPSLGSPLPSPIKTS

Query:  -VPLSSVSRESSPAR
         +  SS+SR  S +R
Subjt:  -VPLSSVSRESSPAR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCTCGGTGCTGTCCGTTGCCCAATGCCTCAAGAACTATGAAGGAAAAACCAGTCCCTGTATCTCCATCTAATCGAACATTGAGGACGTCTTCAAATTTCGCTCACAG
TCAGGTTGAAATGCCTATGGTTTCAAAGAAACCTACACCAGAGAGAAGAGAAATCCTCTTAAAGGAAAGAATGTGCCTGACCAATTGGAGAATTTTAAGCCAATTGATGG
CTTGCATATACCCGGCTTGTGGACCAGTTTCAGGAATTGGGTTATCTTCATTGAGGAGAACTTCATCTGATTCTATGAACAAACTTTTTCAGAAATCTAATAATGATTCT
ACGAGGATTATTCTTCCCCTTGATGATGGTCTTAGAATGGAAAATGGAAGAAATTCAGTTGACGATTGTCCATTGCAAGCATTAGGAATTCCAAAGTTGGCTTTTAATGG
CTTGCTTGATAGGTTAAAATCAACACTTGCTATCAGATCTCAGTCGTTGCCATCACTTGGATCTCCTCTACCTTCACCAATTAAAACCTCAGTGCCATTATCCTCTGTTT
CTAGAGAATCAAGTCCAGCCCGACCAAGACCATCAACTCCTCCTCCCTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPRCCPLPNASRTMKEKPVPVSPSNRTLRTSSNFAHSQVEMPMVSKKPTPERREILLKERMCLTNWRILSQLMACIYPACGPVSGIGLSSLRRTSSDSMNKLFQKSNNDS
TRIILPLDDGLRMENGRNSVDDCPLQALGIPKLAFNGLLDRLKSTLAIRSQSLPSLGSPLPSPIKTSVPLSSVSRESSPARPRPSTPPP

Spg038807 (gene) of Sponge gourd (cylindrica) v1 genome