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Spg038833 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038833
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold12:5557756..5557965
RNA-Seq ExpressionSpg038833
SyntenySpg038833
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581583.1 hypothetical protein SDJN03_21585, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1274.63Show/hide
Query:  SMRLPHFAAAAAVFALVLAMVCLEM-KVHAIEDEIAPMPAMAAGSAFPSSVAFAFNSVFPLLLCIFG
        SMRLPH+ A AAV  L LAMVC EM KVH IE EI+PMPAMAAGSA PS+VA+AFN+VFP LLC FG
Subjt:  SMRLPHFAAAAAVFALVLAMVCLEM-KVHAIEDEIAPMPAMAAGSAFPSSVAFAFNSVFPLLLCIFG
KGN58599.1 hypothetical protein Csa_001638 [Cucumis sativus]9.7e-1371.01Show/hide
Query:  ASMRLPHFAAAAAVFALVLAMVCLEM-KVHAIEDEIAPMPAMAAGSAFPSSVAFAFNSVFPLLLCIFGV
        +SMR PHF   A V  LVLAMV +EM KV +IEDE+APMPAMAAG AFPSSVA  FN V PLLLC+FGV
Subjt:  ASMRLPHFAAAAAVFALVLAMVCLEM-KVHAIEDEIAPMPAMAAGSAFPSSVAFAFNSVFPLLLCIFGV
TrEMBL top hitse value%identityAlignment
A0A0A0LCE5 Uncharacterized protein4.7e-1371.01Show/hide
Query:  ASMRLPHFAAAAAVFALVLAMVCLEM-KVHAIEDEIAPMPAMAAGSAFPSSVAFAFNSVFPLLLCIFGV
        +SMR PHF   A V  LVLAMV +EM KV +IEDE+APMPAMAAG AFPSSVA  FN V PLLLC+FGV
Subjt:  ASMRLPHFAAAAAVFALVLAMVCLEM-KVHAIEDEIAPMPAMAAGSAFPSSVAFAFNSVFPLLLCIFGV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATGAGACTCCCTCATTTTGCTGCTGCTGCTGCTGTTTTTGCTTTGGTTCTTGCAATGGTGTGCTTAGAGATGAAGGTCCATGCCATTGAGGATGAGATAGC
TCCAATGCCTGCCATGGCTGCTGGCTCTGCATTTCCTTCTTCTGTTGCCTTTGCTTTCAATTCTGTATTCCCTCTTTTGCTCTGTATTTTTGGTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATGAGACTCCCTCATTTTGCTGCTGCTGCTGCTGTTTTTGCTTTGGTTCTTGCAATGGTGTGCTTAGAGATGAAGGTCCATGCCATTGAGGATGAGATAGC
TCCAATGCCTGCCATGGCTGCTGGCTCTGCATTTCCTTCTTCTGTTGCCTTTGCTTTCAATTCTGTATTCCCTCTTTTGCTCTGTATTTTTGGTGTCTAA
Protein sequenceShow/hide protein sequence
MASMRLPHFAAAAAVFALVLAMVCLEMKVHAIEDEIAPMPAMAAGSAFPSSVAFAFNSVFPLLLCIFGV