| GenBank top hits | e value | %identity | Alignment |
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| KAA0048391.1 RNA polymerase sigma factor sigD [Cucumis melo var. makuwa] | 1.9e-207 | 85.78 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSY
MATT SLCSLP QSPTLPSISLSSLP LKTHLPQQ HFPF PFS+K G NFIS DTL LPPP E AVLAVEAA EHVLVEAR SE WS K +ERME+S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSY
Query: GDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESR
DG VAWKKKRRKRRKE KAEE+W+ALSSGPLRPGYLSPKEEA LCL LKEA LEK K+RIMETQEHEPTNKQLAIAMGTK GCIDRILCRA+ESR
Subjt: GDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESR
Query: DRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLV+SIA+PYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDKKSRLVR+PGHMGQMVARIAE NNHLGIKLSR
Subjt: DRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
Query: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
PPTN+E+AESL VRVSTVRLV ERS+RPIS++QP+ DR CLTLQEI+PGPDNLTPENM++ KLMKQELK+LLNTLSKREAHILSLYFGLNGEIPQSFEEI
Subjt: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
GKSLNLSRET+R+INIATLSKLKKT++LDY+KDYLV
Subjt: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| XP_004149725.1 RNA polymerase sigma factor sigD, chloroplastic [Cucumis sativus] | 4.3e-207 | 85.55 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSY
MATT SLCSLP QSPTLPSISLSSLP LKTHLPQQ HFPF PFSTK G N ISNDTL LPPP E AVLAVEAA EHVLVEA+ SE WS K +E+ME+S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSY
Query: GDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESR
DG VAWKKKRRKRRKE KAEE+W+ALSSGPLRPGYLSPKEEA LCL LKEA LE K RIMETQEHEPTNKQLAIAMGTK GCIDRILCRA+ESR
Subjt: GDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESR
Query: DRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLV+SIA+PYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVR+PGHMGQMVARIAE NNHLGIKLSR
Subjt: DRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
Query: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
PPTNKE+AESL V +ST+RLV ERS+RPIS++QP+ DR CLTLQEIMPGPDNLTPENM++ KLMKQELK+LLNTLSKREA ILSLYFGLNGEIPQSFEEI
Subjt: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
GKSLNLSRET+RQ NIATLSKLKKTD+LDYLKDYLV
Subjt: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| XP_008461821.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Cucumis melo] | 1.2e-201 | 85.82 | Show/hide |
Query: SPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSYGDDGVVAWKKKRR
SPTLPSISLSSLP LKTHLPQQ HFPF PFS+K G NFIS DTL LPPP E AVLAVEAA EHVLVEAR SE WS K +ERME+S DG VAWKKKRR
Subjt: SPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSYGDDGVVAWKKKRR
Query: KRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRDRLIRCYSKLVVS
KRRKE KAEE+W+ALSSGPLRPGYLSPKEEA LCL LKEA LEK K+RIMETQEHEPTNKQLAIAMGTK GCIDRILCRA+ESRDRLIRCYSKLV+S
Subjt: KRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRDRLIRCYSKLVVS
Query: IASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNV
IA+PYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDKKSRLVR+PGHMGQMVARIAE NNHLGIKLSRPPTN+E+AESL V
Subjt: IASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNV
Query: RVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQ
RVSTVRLV ERS+RPIS++QP+ DR CLTLQEI+PGPDNLTPENM++ KLMKQELK+LLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRET+R+
Subjt: RVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQ
Query: INIATLSKLKKTDILDYLKDYLV
INIATLSKLKKT++LDY+KDYLV
Subjt: INIATLSKLKKTDILDYLKDYLV
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| XP_022152696.1 RNA polymerase sigma factor sigD, chloroplastic [Momordica charantia] | 1.3e-203 | 85.78 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSY
MAT SLCSLP QSPTLPSISLSSLP LKTHLP QSHF F PFSTK GSNF N+T+A+ PP ETAVLAVEAAREHVL E VSE WS LER+E+S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSY
Query: GDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESR
GDDG V WKKKRRKRRKE EKAEE VALSSGPLRPGYL+PKEEA LCL LKEAAQLEKAK RIMETQEHEPTNKQLAIA GT L CIDRILCRAKESR
Subjt: GDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESR
Query: DRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
DRLI+CYSKLVVSIA+PYQGKGLSLQDLTQEGNIGLL GAERFEPNRGHKLSTYAYWWIRQAIIRALD KSRLVR+PGHMGQMVARIAEANNHLGIKLSR
Subjt: DRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
Query: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
PT+KEIAESLNVRVSTV+LVTERS+RPISL+QP+TDRGCLTLQEIMPGPDNLTPENM++ KLMKQEL++LLNTLSKREAHI+ LYFGLNGEIPQSFEEI
Subjt: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
GKS+NLSRETVR++NIA LSKLKKTDILDYLKDY+V
Subjt: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| XP_038906215.1 RNA polymerase sigma factor sigD, chloroplastic [Benincasa hispida] | 1.7e-211 | 86.93 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSY
MATT SLCSLP QSPTLPSISLSSLP LKTHLPQQ HFPF PFSTK G+NFI+NDTL LPPP E AVL VEAAREHVLV+AR SE WS K LERME S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSY
Query: GDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESR
G DG VAWKKKRRKRRKE KAEE+W ALSSGPLRPGYLSPKEEA LCL LKEAAQLE+AK RIMETQEHEPTN+QLAIA+GTKLG IDRILCRA+ESR
Subjt: GDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESR
Query: DRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLV+SIA+PYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVR+PGHMGQMVARIAEANNHLG+KLSR
Subjt: DRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
Query: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
PPT+KE+AESL VRVSTVRLVTERS+RPIS++QP+ DRGCLTLQEIMPGPDNLTPENM++ KLMKQE+K+LLNTLSKREAHILSLYFGLNGEIP+SFEEI
Subjt: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
GKSLNLSRET+RQIN+ATLSKLK TDILDYLK+YLV
Subjt: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L9T0 Uncharacterized protein | 2.1e-207 | 85.55 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSY
MATT SLCSLP QSPTLPSISLSSLP LKTHLPQQ HFPF PFSTK G N ISNDTL LPPP E AVLAVEAA EHVLVEA+ SE WS K +E+ME+S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSY
Query: GDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESR
DG VAWKKKRRKRRKE KAEE+W+ALSSGPLRPGYLSPKEEA LCL LKEA LE K RIMETQEHEPTNKQLAIAMGTK GCIDRILCRA+ESR
Subjt: GDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESR
Query: DRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLV+SIA+PYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVR+PGHMGQMVARIAE NNHLGIKLSR
Subjt: DRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
Query: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
PPTNKE+AESL V +ST+RLV ERS+RPIS++QP+ DR CLTLQEIMPGPDNLTPENM++ KLMKQELK+LLNTLSKREA ILSLYFGLNGEIPQSFEEI
Subjt: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
GKSLNLSRET+RQ NIATLSKLKKTD+LDYLKDYLV
Subjt: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| A0A1S3CFL7 RNA polymerase sigma factor sigD, chloroplastic | 5.9e-202 | 85.82 | Show/hide |
Query: SPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSYGDDGVVAWKKKRR
SPTLPSISLSSLP LKTHLPQQ HFPF PFS+K G NFIS DTL LPPP E AVLAVEAA EHVLVEAR SE WS K +ERME+S DG VAWKKKRR
Subjt: SPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSYGDDGVVAWKKKRR
Query: KRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRDRLIRCYSKLVVS
KRRKE KAEE+W+ALSSGPLRPGYLSPKEEA LCL LKEA LEK K+RIMETQEHEPTNKQLAIAMGTK GCIDRILCRA+ESRDRLIRCYSKLV+S
Subjt: KRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRDRLIRCYSKLVVS
Query: IASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNV
IA+PYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDKKSRLVR+PGHMGQMVARIAE NNHLGIKLSRPPTN+E+AESL V
Subjt: IASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNV
Query: RVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQ
RVSTVRLV ERS+RPIS++QP+ DR CLTLQEI+PGPDNLTPENM++ KLMKQELK+LLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRET+R+
Subjt: RVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQ
Query: INIATLSKLKKTDILDYLKDYLV
INIATLSKLKKT++LDY+KDYLV
Subjt: INIATLSKLKKTDILDYLKDYLV
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| A0A5D3BP27 RNA polymerase sigma factor sigD | 9.4e-208 | 85.78 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSY
MATT SLCSLP QSPTLPSISLSSLP LKTHLPQQ HFPF PFS+K G NFIS DTL LPPP E AVLAVEAA EHVLVEAR SE WS K +ERME+S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSY
Query: GDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESR
DG VAWKKKRRKRRKE KAEE+W+ALSSGPLRPGYLSPKEEA LCL LKEA LEK K+RIMETQEHEPTNKQLAIAMGTK GCIDRILCRA+ESR
Subjt: GDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESR
Query: DRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLV+SIA+PYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDKKSRLVR+PGHMGQMVARIAE NNHLGIKLSR
Subjt: DRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
Query: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
PPTN+E+AESL VRVSTVRLV ERS+RPIS++QP+ DR CLTLQEI+PGPDNLTPENM++ KLMKQELK+LLNTLSKREAHILSLYFGLNGEIPQSFEEI
Subjt: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
GKSLNLSRET+R+INIATLSKLKKT++LDY+KDYLV
Subjt: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| A0A6J1DII5 RNA polymerase sigma factor sigD, chloroplastic | 6.3e-204 | 85.78 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSY
MAT SLCSLP QSPTLPSISLSSLP LKTHLP QSHF F PFSTK GSNF N+T+A+ PP ETAVLAVEAAREHVL E VSE WS LER+E+S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSY
Query: GDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESR
GDDG V WKKKRRKRRKE EKAEE VALSSGPLRPGYL+PKEEA LCL LKEAAQLEKAK RIMETQEHEPTNKQLAIA GT L CIDRILCRAKESR
Subjt: GDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESR
Query: DRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
DRLI+CYSKLVVSIA+PYQGKGLSLQDLTQEGNIGLL GAERFEPNRGHKLSTYAYWWIRQAIIRALD KSRLVR+PGHMGQMVARIAEANNHLGIKLSR
Subjt: DRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
Query: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
PT+KEIAESLNVRVSTV+LVTERS+RPISL+QP+TDRGCLTLQEIMPGPDNLTPENM++ KLMKQEL++LLNTLSKREAHI+ LYFGLNGEIPQSFEEI
Subjt: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
GKS+NLSRETVR++NIA LSKLKKTDILDYLKDY+V
Subjt: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| A0A6J1J3P0 RNA polymerase sigma factor sigD, chloroplastic | 6.1e-199 | 83.3 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSE-TAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDS
MATT SLCSLP QSPTLPSISLSSLP LKTHLPQQ HF SPFSTK NFISNDTL PPPSE AVLAVEAAREHVLVEA +S+ W K LE+ME S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSE-TAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDS
Query: YGDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKES
G DG VAWKK+RRKRRKE E AEE+WVALSSGPLRPG+LS KEEA LCL LKEAAQ+EK K RIMETQ+HEPTNKQLAIAMGTKLG IDR+L RA+ES
Subjt: YGDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKES
Query: RDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLS
RDRLIRCYSKLV+SIA+PYQGKG+SLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQ II+ALDKKSRLVR+PGHMGQMVARIAEANNHLGIKLS
Subjt: RDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLS
Query: RPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEE
R PT+KE+A+ L V VSTVRLVTERS+RPIS+++P+ DRGCLTLQEIMPGPDNLTPENM+I KLMKQELK+LL+TLSKREAHIL+LYFGLNG+IPQSFEE
Subjt: RPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEE
Query: IGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
IGKSLNLSRET+RQ NIATL+KLKK++ILDYLKDYLV
Subjt: IGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 1.6e-47 | 35.35 | Show/hide |
Query: LSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKG
L+ +EE L +++ +LE+ + + E +PT Q A A G + + + +D++I+ +LV+SIA YQG G++LQDL QEG GL++G
Subjt: LSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKG
Query: AERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRG
AE+F+ +G K STYA+WWI+QA+ ++L +SR++R+P HM + R+ EA L + + P N+EIAE+ + + + V + P SL Q I
Subjt: AERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRG
Query: CLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
L E++ P+ +T E++LI++ M+Q+L K+L++L RE ++ FG+ ++ +EIG+ + +SRE VRQI + KLK ++L+ YLV
Subjt: CLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| P26683 RNA polymerase sigma factor SigA | 1.3e-49 | 33.72 | Show/hide |
Query: ERMEDSYGDDGVVAWKKKRRKRRKETREK-AEEDWVALSSGPL-RPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDR
E +E +D + K + +RR ++++K ED + L + R L EE L + + +LE+ + R+ E E +P + + A A+ L
Subjt: ERMEDSYGDDGVVAWKKKRRKRRKETREK-AEEDWVALSSGPL-RPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDR
Query: ILCRAKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEAN
L + ++D++++ +LVVSIA Y +GLS QDL QEG++GL++ AE+F+ +G+K STYA WWIRQAI RA+ +SR +R+P H+ + ++RI +
Subjt: ILCRAKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEAN
Query: NHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNG
L ++ R PT +EIA + + + +R + + ++ PISL PI L + + D TPE+ + + L++++L+K+L++LS RE +L L +GL+
Subjt: NHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNG
Query: EIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYL
++ EEIG+ N++RE +RQI L KL+ + LK+Y+
Subjt: EIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYL
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| P38023 RNA polymerase sigma factor SigA1 | 1.6e-50 | 35 | Show/hide |
Query: EDSYGDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPL-RPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCR
EDS G+D A K K + R+ T ED + L + R L EE L + + LE+ + ++E + P++ + A A+ + L R L R
Subjt: EDSYGDDGVVAWKKKRRKRRKETREKAEEDWVALSSGPL-RPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCR
Query: AKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLG
+ ++D++++ +LVVSIA Y +GLS QDL QEG++GL++ AE+F+ +G+K STYA WWIRQAI RA+ +SR +R+P H+ + ++RI + L
Subjt: AKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLG
Query: IKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQ
++ R PT +EIA + + + +R + + ++ PISL PI L + + D TPE+ + + L++++L+ +L+TLS RE +L L +GL+ +
Subjt: IKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQ
Query: SFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYL
+ EEIG+ N++RE +RQI L KL+ + LK+Y+
Subjt: SFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYL
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| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 3.0e-46 | 34.67 | Show/hide |
Query: DDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRD
D+G V K +K+ K+ + + + L GP L+ KEEA L ++ +LEK K ++ EPT + A AMG + + R + SR+
Subjt: DDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRD
Query: RLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRP
+LI +LVV IA YQ +GL+ QDL QEG++GL+K E+F+P G + +TYAYWWIRQ+I +++ + SR +R+P ++ ++ +++EA + +
Subjt: RLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRP
Query: PTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIG
P+ +E+A + V + + +R P+S+ QPI T QEI P TP + ++LM+ ++ LLN LS +E I+ L FG++G +S EIG
Subjt: PTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIG
Query: KSLNLSRETVRQINIATLSKLKK
+ LS+E VRQ+ L +LK+
Subjt: KSLNLSRETVRQINIATLSKLKK
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| Q9ZSL6 RNA polymerase sigma factor sigD, chloroplastic | 8.7e-86 | 45.72 | Show/hide |
Query: TGSLCSLPPQSPTLPSISLSSLPLLK-THLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSYGD
T ++C PP +P+IS PLL+ TH Q S SPFS K + + DT T V+++ V+++ E W ++ +R
Subjt: TGSLCSLPPQSPTLPSISLSSLPLLK-THLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSYGD
Query: DGVVAWKKKRRKRR--KETREKAEEDWVALSS----------GPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCID
+K+RR+RR E E EE+ + + G R G+LS EE LCL LKE A+LE + +E+E + LA G K +
Subjt: DGVVAWKKKRRKRR--KETREKAEEDWVALSS----------GPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCID
Query: RILCRAKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEA
ILCR KE+R+++ RCY +LVVSIA+ YQGKGL+LQDL QEG+IGLL+GAERF+P+RG+KLSTY YWWI+QAI+RA+ KSRLV++PG M ++ A++AEA
Subjt: RILCRAKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEA
Query: NNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLN
+N L KL R P+ +EIAE LN+ VS VRL ERSR P+SL + + G +TLQEI+ GPD PE M+ + MK E+++LL +L+ RE+ +L LYFGLN
Subjt: NNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLN
Query: GEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDY
GE P SFEEIGKSL LSRE VRQIN L KL+ ++ LK Y
Subjt: GEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDY
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.1e-48 | 35.35 | Show/hide |
Query: LSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKG
L+ +EE L +++ +LE+ + + E +PT Q A A G + + + +D++I+ +LV+SIA YQG G++LQDL QEG GL++G
Subjt: LSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKG
Query: AERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRG
AE+F+ +G K STYA+WWI+QA+ ++L +SR++R+P HM + R+ EA L + + P N+EIAE+ + + + V + P SL Q I
Subjt: AERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRG
Query: CLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
L E++ P+ +T E++LI++ M+Q+L K+L++L RE ++ FG+ ++ +EIG+ + +SRE VRQI + KLK ++L+ YLV
Subjt: CLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| AT1G64860.1 sigma factor A | 7.7e-37 | 31.05 | Show/hide |
Query: VLVEARAVSEAWSFKTLERMEDSYGDDGVVAWKK---------KRRKRRKETREKAEEDWVA----LSSGPLRPGY---------LSPKEEAVLCLSLKE
+L++ + ++W+ + + Y G + KK R+RR ++K V +SSG GY LS E L +K
Subjt: VLVEARAVSEAWSFKTLERMEDSYGDDGVVAWKK---------KRRKRRKETREKAEEDWVA----LSSGPLRPGY---------LSPKEEAVLCLSLKE
Query: AAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTY
+L+ K+R+ + EP+++QLA+++ + L +R++L +LV+SIA Y G + DL Q G IGLL+G E+F+ ++G ++STY
Subjt: AAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTY
Query: AYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLT
YWWIRQ + RAL SR +R+P H+ + + I A L K P ++ IAESLN+ VR TE + SL DR +PG + +
Subjt: AYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLT
Query: ----------PENMLIEKLMKQELKKLLN-TLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQINIATLSKLK
P + + +K+E+ KL++ TL +RE I+ LY+GL+ E ++E+I K + LSRE VRQ+ + L KLK
Subjt: ----------PENMLIEKLMKQELKKLLN-TLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQINIATLSKLK
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| AT1G64860.2 sigma factor A | 1.1e-30 | 29.64 | Show/hide |
Query: VLVEARAVSEAWSFKTLERMEDSYGDDGVVAWKK---------KRRKRRKETREKAEEDWVA----LSSGPLRPGY---------LSPKEEAVLCLSLKE
+L++ + ++W+ + + Y G + KK R+RR ++K V +SSG GY LS E L +K
Subjt: VLVEARAVSEAWSFKTLERMEDSYGDDGVVAWKK---------KRRKRRKETREKAEEDWVA----LSSGPLRPGY---------LSPKEEAVLCLSLKE
Query: AAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTY
+L+ K+R+ + EP+++QLA+++ + L +R++L +LV+SIA Y G + DL Q G IGLL+G E+F+ ++G ++STY
Subjt: AAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTY
Query: AYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLT
YWWIRQ + RAL SR +R+P H+ + + I A L K P ++ IAESLN+ VR TE + SL DR +PG + +
Subjt: AYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLT
Query: ----------PENMLIEKLMKQELKKLLN-TLSKREAHILSLYFGLNGEIPQSFEEIGKSL
P + + +K+E+ KL++ TL +RE I+ LY+GL+ E ++E+I K +
Subjt: ----------PENMLIEKLMKQELKKLLN-TLSKREAHILSLYFGLNGEIPQSFEEIGKSL
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| AT2G36990.1 RNApolymerase sigma-subunit F | 2.2e-47 | 34.67 | Show/hide |
Query: DDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRD
D+G V K +K+ K+ + + + L GP L+ KEEA L ++ +LEK K ++ EPT + A AMG + + R + SR+
Subjt: DDGVVAWKKKRRKRRKETREKAEEDWVALSSGPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCIDRILCRAKESRD
Query: RLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRP
+LI +LVV IA YQ +GL+ QDL QEG++GL+K E+F+P G + +TYAYWWIRQ+I +++ + SR +R+P ++ ++ +++EA + +
Subjt: RLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRP
Query: PTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIG
P+ +E+A + V + + +R P+S+ QPI T QEI P TP + ++LM+ ++ LLN LS +E I+ L FG++G +S EIG
Subjt: PTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLNGEIPQSFEEIG
Query: KSLNLSRETVRQINIATLSKLKK
+ LS+E VRQ+ L +LK+
Subjt: KSLNLSRETVRQINIATLSKLKK
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| AT5G13730.1 sigma factor 4 | 6.2e-87 | 45.72 | Show/hide |
Query: TGSLCSLPPQSPTLPSISLSSLPLLK-THLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSYGD
T ++C PP +P+IS PLL+ TH Q S SPFS K + + DT T V+++ V+++ E W ++ +R
Subjt: TGSLCSLPPQSPTLPSISLSSLPLLK-THLPQQSHFPFSPFSTKSGSNFISNDTLALPPPSETAVLAVEAAREHVLVEARAVSEAWSFKTLERMEDSYGD
Query: DGVVAWKKKRRKRR--KETREKAEEDWVALSS----------GPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCID
+K+RR+RR E E EE+ + + G R G+LS EE LCL LKE A+LE + +E+E + LA G K +
Subjt: DGVVAWKKKRRKRR--KETREKAEEDWVALSS----------GPLRPGYLSPKEEAVLCLSLKEAAQLEKAKARIMETQEHEPTNKQLAIAMGTKLGCID
Query: RILCRAKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEA
ILCR KE+R+++ RCY +LVVSIA+ YQGKGL+LQDL QEG+IGLL+GAERF+P+RG+KLSTY YWWI+QAI+RA+ KSRLV++PG M ++ A++AEA
Subjt: RILCRAKESRDRLIRCYSKLVVSIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEA
Query: NNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLN
+N L KL R P+ +EIAE LN+ VS VRL ERSR P+SL + + G +TLQEI+ GPD PE M+ + MK E+++LL +L+ RE+ +L LYFGLN
Subjt: NNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMLIEKLMKQELKKLLNTLSKREAHILSLYFGLN
Query: GEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDY
GE P SFEEIGKSL LSRE VRQIN L KL+ ++ LK Y
Subjt: GEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDY
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