; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038918 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038918
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionHMG-Y-related protein A-like
Genome locationscaffold12:2348195..2350114
RNA-Seq ExpressionSpg038918
SyntenySpg038918
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR000116 - High mobility group protein HMGA
IPR005818 - Linker histone H1/H5, domain H15
IPR017956 - AT hook, DNA-binding motif
IPR031059 - High mobility group protein HMGA, plant
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145857.1 HMG-Y-related protein A isoform X2 [Cucumis sativus]7.2e-8491.11Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT+EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ
          +V+S PKPRGRPPKDPNAPPKPPKPV+MKVSS TGKPRGRPRKFP+ A+T APPAPSGRPRGRPPKVKA LTEVSVQQ
Subjt:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ

XP_008456999.1 PREDICTED: HMG-Y-related protein A-like [Cucumis melo]8.5e-8591.67Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT+EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ
          + +SPPKPRGRPPKDPNAPPKPPKPV+MKVSS TGKPRGRPRKFP+ ATT APPAPSGRPRGRPPKVKA LTEVSVQQ
Subjt:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ

XP_022143283.1 HMG-Y-related protein A-like [Momordica charantia]8.0e-8390Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT  VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ
        +    SPPKPRGRPPKDPNAPP+PPKPV MKVSS TGKPRGRPRK  RP +  APPAPSGRPRGRPPK KAPLTEV VQQ
Subjt:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ

XP_022935331.1 HMG-Y-related protein A-like [Cucurbita moschata]7.7e-8692.9Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MA EEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPK KVPLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  AGAVLSPPKPRGRPPKDPNA---PPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ
         G+VLSPPKPRGRPPKDPNA   PPKPPKPV+MKVSS TGKPRGRPRKFPRPAT  APP PSGRPRGRPPKVK PLTEVSVQQ
Subjt:  AGAVLSPPKPRGRPPKDPNA---PPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ

XP_038878302.1 HMG-Y-related protein A-like [Benincasa hispida]8.0e-8390.56Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MATEEVNKPPSLPPYPEMIFRAIEALNS+NGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPK PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ
          +VLSPPKPRGRPPKDPNAPPKPPKPV+MKVSS TGK RGRPRKFP   T  +PP PSGRPRGRPPKVK  LTEVSVQQ
Subjt:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ

TrEMBL top hitse value%identityAlignment
A0A0A0LCH9 H15 domain-containing protein3.5e-8491.11Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT+EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ
          +V+S PKPRGRPPKDPNAPPKPPKPV+MKVSS TGKPRGRPRKFP+ A+T APPAPSGRPRGRPPKVKA LTEVSVQQ
Subjt:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ

A0A1S3C432 HMG-Y-related protein A-like4.1e-8591.67Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT+EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ
          + +SPPKPRGRPPKDPNAPPKPPKPV+MKVSS TGKPRGRPRKFP+ ATT APPAPSGRPRGRPPKVKA LTEVSVQQ
Subjt:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ

A0A5D3DJY3 HMG-Y-related protein A-like4.1e-8591.67Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MAT+EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ
          + +SPPKPRGRPPKDPNAPPKPPKPV+MKVSS TGKPRGRPRKFP+ ATT APPAPSGRPRGRPPKVKA LTEVSVQQ
Subjt:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ

A0A6J1F494 HMG-Y-related protein A-like3.7e-8692.9Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MA EEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPK KVPLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  AGAVLSPPKPRGRPPKDPNA---PPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ
         G+VLSPPKPRGRPPKDPNA   PPKPPKPV+MKVSS TGKPRGRPRKFPRPAT  APP PSGRPRGRPPKVK PLTEVSVQQ
Subjt:  AGAVLSPPKPRGRPPKDPNA---PPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ

A0A6J1J6G8 HMG-Y-related protein A-like3.7e-8692.9Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MA EEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPK KVPLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  AGAVLSPPKPRGRPPKDPNA---PPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ
         G+VLSPPKPRGRPPKDPNA   PPKPPKPV+MKVSS TGKPRGRPRKFPRPAT  APP PSGRPRGRPPKVK PLTEVSVQQ
Subjt:  AGAVLSPPKPRGRPPKDPNA---PPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ

SwissProt top hitse value%identityAlignment
Q00423 HMG-Y-related protein A1.9e-5869.44Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP
        MATEEVNKP SLPPYPEMI + +EALN  NGSNKS ISKYIE+TYG LP   +++L  HLN MK SGEL F +NNYMK DP APP+RGRGRPPKPK PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLP

Query:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPA-PSGRPRGRPPKVKAPLTEVSVQ
         G V+SPP+PRGRPPKDPNAPPK P   K K +  +G+PRGRP+K PR     AP A  SGRPRGRPPKVK  LTEVSV+
Subjt:  AGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPA-PSGRPRGRPPKVKAPLTEVSVQ

Q10370 HMG-Y-related protein B (Fragment)6.2e-4667.95Show/hide
Query:  ALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPAGAVLSPPKPRGRPPKDPNAPPKP
        ALN  +GSNKS ISKYIE+TYG LP    ++L  HLN MK SGEL F +NNYMK DP APP+RGRGRPPKPKVPLP G V+SPP+PRGRPPKDPNAPPK 
Subjt:  ALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPAGAVLSPPKPRGRPPKDPNAPPKP

Query:  PKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPS-GRPRGRPPKVKAPLTEVSVQ
        P   K K + ATG+PRGRP+K  R     +P A S GRPRGRPPKVK  LTEVSV+
Subjt:  PKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPS-GRPRGRPPKVKAPLTEVSVQ

Q43386 HMG-Y-related protein A4.9e-3552.25Show/hide
Query:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPAGAVLS----
        SLPPYP+MI  AIE+LN  NG NK+TI+K+IEST   LP  H +LL++HLN MK +G+L+  KNNYMK DP APP+RGRGRPPK K    + A  +    
Subjt:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPAGAVLS----

Query:  -------PPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPR-PATTVAPPAPSG------RPRGRPPKVK
               PP+ RGRPPK    P  P +P + KV + +G+PRGRP K PR  + TVA P P+       R RGRPPKVK
Subjt:  -------PPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPR-PATTVAPPAPSG------RPRGRPPKVK

Q9FYS5 HMG-Y-related protein A6.0e-3352.66Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRD-PTAPPRRGRGRPPKPKVP-
        MAT+E  KP  +PPYPEMI  AIE L+  +GSNKS ISKYIE  YG+LP  H+SLLT HL  MK SGELVF KNNY +   P APP+RGRGRPPK + P 
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRD-PTAPPRRGRGRPPKPKVP-

Query:  LPAGAVLSPPKP-RGRPPKDPNAPPKPPKPVKMKVSSATG---KPRGRPRKFPRPATTVAP-----PAPSG-------RPRGRPPKVK
         PA A  SP    RGR       PPK   P++  V  AT    KPRGRP K  +     +P     PAP+G       R RGRPPKV+
Subjt:  LPAGAVLSPPKP-RGRPPKDPNAPPKPPKPVKMKVSSATG---KPRGRPRKFPRPATTVAP-----PAPSG-------RPRGRPPKVK

Arabidopsis top hitse value%identityAlignment
AT1G14900.1 high mobility group A3.5e-3652.25Show/hide
Query:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPAGAVLS----
        SLPPYP+MI  AIE+LN  NG NK+TI+K+IEST   LP  H +LL++HLN MK +G+L+  KNNYMK DP APP+RGRGRPPK K    + A  +    
Subjt:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPAGAVLS----

Query:  -------PPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPR-PATTVAPPAPSG------RPRGRPPKVK
               PP+ RGRPPK    P  P +P + KV + +G+PRGRP K PR  + TVA P P+       R RGRPPKVK
Subjt:  -------PPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPR-PATTVAPPAPSG------RPRGRPPKVK

AT1G48620.1 high mobility group A51.9e-1334.22Show/hide
Query:  TEEVNKPPSL--PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNY-MKRDPTAPP--------------
        T  V   PS+  PPY +MI  AI ALN  +GS+K  IS+YIE  Y  +PT H +LLTHHL  +K SG LV  K +Y +   P  PP              
Subjt:  TEEVNKPPSL--PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNY-MKRDPTAPP--------------

Query:  ----------------------RRGRGRPPKPK------VPLPAGAV------LSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRK-----F
                              +RGRGRPPK K       PL  G +      L   +P     + P  P +P +PVK        +P GRPRK      
Subjt:  ----------------------RRGRGRPPKPK------VPLPAGAV------LSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRK-----F

Query:  PRPATTVAPPAPSGRPRGRPPKVKA
         +PA +V+    + + RGRPP  +A
Subjt:  PRPATTVAPPAPSGRPRGRPPKVKA

AT3G18035.1 winged-helix DNA-binding transcription factor family protein4.6e-1231.2Show/hide
Query:  PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNY---------------------------------MKR
        PPY EMI  AI ALN  +GS+K  IS+YIE  Y  L + H++LLTHHL  +K SG L   K +Y                                    
Subjt:  PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNY---------------------------------MKR

Query:  DPTA------PPRRGRGRPPKPK---------------------------------VPLPAGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPR
        DP A      P +RGRGRPPKPK                                 VP+P     S  +  GRP K+ +A P     V+  V +   K R
Subjt:  DPTA------PPRRGRGRPPKPK---------------------------------VPLPAGAVLSPPKPRGRPPKDPNAPPKPPKPVKMKVSSATGKPR

Query:  GRP--------RKFPRPATTVAPPAP----SGRPRGRPPKVKAPLTEVSV
        GRP        ++ P+  ++ A   P      R RGRP +V  P + VSV
Subjt:  GRP--------RKFPRPATTVAPPAP----SGRPRGRPPKVKAPLTEVSV

AT5G08780.1 winged-helix DNA-binding transcription factor family protein1.8e-0840Show/hide
Query:  VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNN
        +++ P  P Y  MIF AI  LN + G+++  IS++I+S Y NLP  H++LL+HHL  +    E++   NN
Subjt:  VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGAAGAGGTTAATAAACCTCCATCACTCCCTCCTTACCCTGAGATGATATTTAGGGCTATTGAAGCATTGAATAGTGACAATGGCTCAAACAAGTCCACAAT
ATCAAAGTACATTGAATCAACATATGGGAACTTGCCAACTGGGCACTCATCTTTGCTCACACACCATTTGAACATGATGAAAGCCAGTGGGGAACTTGTGTTCTGGAAGA
ACAACTACATGAAGAGGGATCCCACGGCGCCTCCCCGGCGGGGGCGTGGCAGGCCTCCGAAACCGAAGGTGCCTCTCCCCGCGGGTGCTGTTTTATCCCCACCGAAGCCG
AGAGGTCGCCCGCCTAAGGACCCCAATGCACCTCCAAAACCACCAAAGCCAGTGAAGATGAAGGTATCTTCTGCGACCGGGAAACCAAGAGGACGACCAAGGAAATTTCC
TCGGCCAGCAACCACGGTAGCTCCTCCCGCACCGAGCGGGAGGCCTAGAGGTCGACCTCCCAAGGTGAAGGCTCCATTGACTGAAGTTAGCGTTCAACAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGAAGAGGTTAATAAACCTCCATCACTCCCTCCTTACCCTGAGATGATATTTAGGGCTATTGAAGCATTGAATAGTGACAATGGCTCAAACAAGTCCACAAT
ATCAAAGTACATTGAATCAACATATGGGAACTTGCCAACTGGGCACTCATCTTTGCTCACACACCATTTGAACATGATGAAAGCCAGTGGGGAACTTGTGTTCTGGAAGA
ACAACTACATGAAGAGGGATCCCACGGCGCCTCCCCGGCGGGGGCGTGGCAGGCCTCCGAAACCGAAGGTGCCTCTCCCCGCGGGTGCTGTTTTATCCCCACCGAAGCCG
AGAGGTCGCCCGCCTAAGGACCCCAATGCACCTCCAAAACCACCAAAGCCAGTGAAGATGAAGGTATCTTCTGCGACCGGGAAACCAAGAGGACGACCAAGGAAATTTCC
TCGGCCAGCAACCACGGTAGCTCCTCCCGCACCGAGCGGGAGGCCTAGAGGTCGACCTCCCAAGGTGAAGGCTCCATTGACTGAAGTTAGCGTTCAACAATAG
Protein sequenceShow/hide protein sequence
MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKVPLPAGAVLSPPKP
RGRPPKDPNAPPKPPKPVKMKVSSATGKPRGRPRKFPRPATTVAPPAPSGRPRGRPPKVKAPLTEVSVQQ