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Spg038940 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038940
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit A
Genome locationscaffold12:362784..367258
RNA-Seq ExpressionSpg038940
SyntenySpg038940
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK05527.1 eukaryotic translation initiation factor 3 subunit A-like [Cucumis melo var. makuwa]7.5e-0437.31Show/hide
Query:  VALDTIGTSWSVMIMWKEDSVLIPDS------LIGLATSSIMTFNGLIDDLDLIGVPLNNGKFTWAD
        V L+  G+S  +++MWKED + + DS      L  +   S+  FN LI+++DL+ +P  NG F+W D
Subjt:  VALDTIGTSWSVMIMWKEDSVLIPDS------LIGLATSSIMTFNGLIDDLDLIGVPLNNGKFTWAD
TrEMBL top hitse value%identityAlignment
A0A5D3C150 Eukaryotic translation initiation factor 3 subunit A3.6e-0437.31Show/hide
Query:  VALDTIGTSWSVMIMWKEDSVLIPDS------LIGLATSSIMTFNGLIDDLDLIGVPLNNGKFTWAD
        V L+  G+S  +++MWKED + + DS      L  +   S+  FN LI+++DL+ +P  NG F+W D
Subjt:  VALDTIGTSWSVMIMWKEDSVLIPDS------LIGLATSSIMTFNGLIDDLDLIGVPLNNGKFTWAD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGGGACGTGGGAGTGGGAGTGGACGTGGGCAAAATACAGACATTTGAGTTGGTTGATTCTCGACACCCTGATGGAACCGATCGACTGACAAGTCTTGCAAAACT
GACATCGACCGAGAAGAAGGCTGTTGAAGTCTATTTGGAGTTCGAAAAGGATCGGTTGGTGGCCCTTGATACTATTGGTACTTCATGGAGTGTAATGATTATGTGGAAAG
AAGATAGTGTCTTAATTCCCGATTCTCTCATTGGTTTGGCAACTAGTAGTATTATGACGTTTAATGGGCTGATTGATGATCTTGATCTCATTGGTGTGCCTTTAAATAAT
GGTAAATTCACTTGGGCTGATGGCATGGAAAGACTAATTTCTACTAGAATCGATAATTTTAAAGGAGTAAAGGATGTGGAACCACAAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCTGGGACGTGGGAGTGGGAGTGGACGTGGGCAAAATACAGACATTTGAGTTGGTTGATTCTCGACACCCTGATGGAACCGATCGACTGACAAGTCTTGCAAAACT
GACATCGACCGAGAAGAAGGCTGTTGAAGTCTATTTGGAGTTCGAAAAGGATCGGTTGGTGGCCCTTGATACTATTGGTACTTCATGGAGTGTAATGATTATGTGGAAAG
AAGATAGTGTCTTAATTCCCGATTCTCTCATTGGTTTGGCAACTAGTAGTATTATGACGTTTAATGGGCTGATTGATGATCTTGATCTCATTGGTGTGCCTTTAAATAAT
GGTAAATTCACTTGGGCTGATGGCATGGAAAGACTAATTTCTACTAGAATCGATAATTTTAAAGGAGTAAAGGATGTGGAACCACAAGTGTAG
Protein sequenceShow/hide protein sequence
MGWDVGVGVDVGKIQTFELVDSRHPDGTDRLTSLAKLTSTEKKAVEVYLEFEKDRLVALDTIGTSWSVMIMWKEDSVLIPDSLIGLATSSIMTFNGLIDDLDLIGVPLNN
GKFTWADGMERLISTRIDNFKGVKDVEPQV