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Spg038945 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038945
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMethionyl-tRNA formyltransferase
Genome locationscaffold12:3123089..3124375
RNA-Seq ExpressionSpg038945
SyntenySpg038945
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0071951 - conversion of methionyl-tRNA to N-formyl-methionyl-tRNA (biological process)
GO:0004479 - methionyl-tRNA formyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036698.1 fmt, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-1388.64Show/hide
Query:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
        R+  EVLEVQLPGKKVVSAGAFWNGMQGK+LKKFDE+KHFSHVS
Subjt:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
XP_022948301.1 uncharacterized protein LOC111452018 isoform X1 [Cucurbita moschata]6.2e-1388.64Show/hide
Query:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
        R+  EVLEVQLPGKKVVSAGAFWNGMQGK+LKKFDE+KHFSHVS
Subjt:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
XP_022948302.1 uncharacterized protein LOC111452018 isoform X2 [Cucurbita moschata]6.2e-1388.64Show/hide
Query:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
        R+  EVLEVQLPGKKVVSAGAFWNGMQGK+LKKFDE+KHFSHVS
Subjt:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
XP_022998162.1 uncharacterized protein LOC111492892 isoform X1 [Cucurbita maxima]6.2e-1388.64Show/hide
Query:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
        R+  EVLEVQLPGKKVVSAGAFWNGMQGK+LKKFDE+KHFSHVS
Subjt:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
XP_022998163.1 uncharacterized protein LOC111492892 isoform X2 [Cucurbita maxima]6.2e-1388.64Show/hide
Query:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
        R+  EVLEVQLPGKKVVSAGAFWNGMQGK+LKKFDE+KHFSHVS
Subjt:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
TrEMBL top hitse value%identityAlignment
A0A6J1CQ38 Methionyl-tRNA formyltransferase3.9e-1393.02Show/hide
Query:  SRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
        S  EVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDE KHFSHVS
Subjt:  SRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
A0A6J1G8T3 Methionyl-tRNA formyltransferase3.0e-1388.64Show/hide
Query:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
        R+  EVLEVQLPGKKVVSAGAFWNGMQGK+LKKFDE+KHFSHVS
Subjt:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
A0A6J1G8W6 Methionyl-tRNA formyltransferase3.0e-1388.64Show/hide
Query:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
        R+  EVLEVQLPGKKVVSAGAFWNGMQGK+LKKFDE+KHFSHVS
Subjt:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
A0A6J1K752 Methionyl-tRNA formyltransferase3.0e-1388.64Show/hide
Query:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
        R+  EVLEVQLPGKKVVSAGAFWNGMQGK+LKKFDE+KHFSHVS
Subjt:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
A0A6J1KG07 Methionyl-tRNA formyltransferase3.0e-1388.64Show/hide
Query:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
        R+  EVLEVQLPGKKVVSAGAFWNGMQGK+LKKFDE+KHFSHVS
Subjt:  RSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66520.1 formyltransferase, putative2.4e-0775.86Show/hide
Query:  EVLEVQLPGKKVVSAGAFWNGMQGKKLKK
        EVLEVQLPGKK ++A AFWNG++G+KLKK
Subjt:  EVLEVQLPGKKVVSAGAFWNGMQGKKLKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGCATTACAGAACTTTTCATTAAGATGTTTTCATCTGTGTTTGAACCTTCGAGTGAACTTAATAAGGAAAACTCTAAGTCTCTTAGGTCGAGGTTTGAGGTACT
GGAAGTTCAATTACCTGGAAAGAAGGTTGTGAGCGCTGGCGCCTTTTGGAATGGCATGCAAGGGAAAAAGTTGAAGAAATTTGATGAAAGTAAGCATTTTTCGCACGTCT
CATCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGCATTACAGAACTTTTCATTAAGATGTTTTCATCTGTGTTTGAACCTTCGAGTGAACTTAATAAGGAAAACTCTAAGTCTCTTAGGTCGAGGTTTGAGGTACT
GGAAGTTCAATTACCTGGAAAGAAGGTTGTGAGCGCTGGCGCCTTTTGGAATGGCATGCAAGGGAAAAAGTTGAAGAAATTTGATGAAAGTAAGCATTTTTCGCACGTCT
CATCGTGA
Protein sequenceShow/hide protein sequence
MWGITELFIKMFSSVFEPSSELNKENSKSLRSRFEVLEVQLPGKKVVSAGAFWNGMQGKKLKKFDESKHFSHVSS