; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038960 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038960
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionABC transporter C family member 13
Genome locationscaffold12:6231471..6236540
RNA-Seq ExpressionSpg038960
SyntenySpg038960
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR011527 - ABC transporter type 1, transmembrane domain
IPR036640 - ABC transporter type 1, transmembrane domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153502.1 ABC transporter C family member 13 isoform X1 [Momordica charantia]1.5e-4093.14Show/hide
Query:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY
        LSSDLYTIDDSLPFILNILLANFVGLLGI IVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF CE  F+
Subjt:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY

Query:  MK
         +
Subjt:  MK

XP_022153505.1 ABC transporter C family member 13 isoform X4 [Momordica charantia]1.5e-4093.14Show/hide
Query:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY
        LSSDLYTIDDSLPFILNILLANFVGLLGI IVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF CE  F+
Subjt:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY

Query:  MK
         +
Subjt:  MK

XP_022153507.1 ABC transporter C family member 13 isoform X5 [Momordica charantia]1.5e-4093.14Show/hide
Query:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY
        LSSDLYTIDDSLPFILNILLANFVGLLGI IVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF CE  F+
Subjt:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY

Query:  MK
         +
Subjt:  MK

XP_022153509.1 ABC transporter C family member 13 isoform X7 [Momordica charantia]1.5e-4093.14Show/hide
Query:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY
        LSSDLYTIDDSLPFILNILLANFVGLLGI IVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF CE  F+
Subjt:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY

Query:  MK
         +
Subjt:  MK

XP_031737702.1 ABC transporter C family member 13 isoform X4 [Cucumis sativus]1.5e-4092.16Show/hide
Query:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY
        LSSDLYTIDDSLPFILNILLANFVGLLGIA+VLSYVQVFFLLLLLPFWYIYSKLQFFYR+TARELRRLDSVSRSPIYSSFTETLDGSATIRAF CE  F+
Subjt:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY

Query:  MK
         +
Subjt:  MK

TrEMBL top hitse value%identityAlignment
A0A0A0LD65 Uncharacterized protein7.5e-4192.16Show/hide
Query:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY
        LSSDLYTIDDSLPFILNILLANFVGLLGIA+VLSYVQVFFLLLLLPFWYIYSKLQFFYR+TARELRRLDSVSRSPIYSSFTETLDGSATIRAF CE  F+
Subjt:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY

Query:  MK
         +
Subjt:  MK

A0A6J1DH17 ABC transporter C family member 13 isoform X87.5e-4193.14Show/hide
Query:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY
        LSSDLYTIDDSLPFILNILLANFVGLLGI IVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF CE  F+
Subjt:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY

Query:  MK
         +
Subjt:  MK

A0A6J1DJ32 ABC transporter C family member 13 isoform X17.5e-4193.14Show/hide
Query:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY
        LSSDLYTIDDSLPFILNILLANFVGLLGI IVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF CE  F+
Subjt:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY

Query:  MK
         +
Subjt:  MK

A0A6J1DJ37 ABC transporter C family member 13 isoform X57.5e-4193.14Show/hide
Query:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY
        LSSDLYTIDDSLPFILNILLANFVGLLGI IVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF CE  F+
Subjt:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY

Query:  MK
         +
Subjt:  MK

A0A6J1DJ96 ABC transporter C family member 13 isoform X77.5e-4193.14Show/hide
Query:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY
        LSSDLYTIDDSLPFILNILLANFVGLLGI IVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF CE  F+
Subjt:  LSSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFY

Query:  MK
         +
Subjt:  MK

SwissProt top hitse value%identityAlignment
Q10185 ATP-binding cassette transporter abc29.2e-1237.76Show/hide
Query:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVF
        SSD+Y +D+ +  +      N   ++ +  V+ Y    F++L++P +++Y   Q +Y  T+REL+RLDSV+RSP+Y+ F E+L G +TIRA++ E  F
Subjt:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVF

Q5T3U5 ATP-binding cassette sub-family C member 102.9e-1352.75Show/hide
Query:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRA
        SSD+   DDSLPFILNILLAN  GLLG+  VL     + LLLL P   +Y  +Q  YR+++RELRRL S++ SP+YS   +TL G + +RA
Subjt:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRA

Q8R4P9 ATP-binding cassette sub-family C member 101.5e-1452.75Show/hide
Query:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRA
        SSD+  +DDSLPF+LNILLAN VGLLG+  VL     + LLLL P  ++Y  +Q +YR++ RELRRL S++ SP+YS   +TL G   +RA
Subjt:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRA

Q92887 ATP-binding cassette sub-family C member 21.9e-1243.48Show/hide
Query:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF
        + D+ T+DD+LP  L   +  F+G++   +++      F ++++P   IY  +Q FY ST+R+LRRLDSV+RSPIYS F+ET+ G   IRAF
Subjt:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF

Q9SKX0 ABC transporter C family member 132.0e-3888.78Show/hide
Query:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVF
        SSDLYTIDDSLPFILNILLANFVGLLGI +VLSYVQV FLLLLLPFWYIYSKLQ FYRST+RELRRLDSVSRSPIY+SFTETLDGS+TIRAF  E  F
Subjt:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVF

Arabidopsis top hitse value%identityAlignment
AT1G30410.1 multidrug resistance-associated protein 134.9e-0835.87Show/hide
Query:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF
        S D+  ID ++  ++N+ +     LL    ++  V    L  ++P   ++     +Y+ST+RE+RRLDSV+RSPIY+ F E L+G ++IRA+
Subjt:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF

AT1G30420.1 multidrug resistance-associated protein 126.3e-0835.87Show/hide
Query:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF
        S D+  ID ++  ++N+ +     LL    ++  V    L  ++P   ++     +Y+ST+RE+RRLDSV+RSPIY+ F E L+G ++IRA+
Subjt:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF

AT2G07680.1 multidrug resistance-associated protein 111.4e-3988.78Show/hide
Query:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVF
        SSDLYTIDDSLPFILNILLANFVGLLGI +VLSYVQV FLLLLLPFWYIYSKLQ FYRST+RELRRLDSVSRSPIY+SFTETLDGS+TIRAF  E  F
Subjt:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVF

AT2G34660.1 multidrug resistance-associated protein 29.8e-0933.7Show/hide
Query:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF
        + DL  ID ++   +N+ +     LL   +++  V    L  ++P   ++     +Y++TARE++R+DS+SRSP+Y+ F E L+G +TIRA+
Subjt:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF

AT2G34660.2 multidrug resistance-associated protein 29.8e-0933.7Show/hide
Query:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF
        + DL  ID ++   +N+ +     LL   +++  V    L  ++P   ++     +Y++TARE++R+DS+SRSP+Y+ F E L+G +TIRA+
Subjt:  SSDLYTIDDSLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCGACCAAACAATTGGGAAAGACCCACGTTGAGCGACTTGTTGAGATAGAGGAACAGTTGCTATATTTGAGGGAAGTACCTGACTCGGTACGATATGTCGAAAG
TCGACTTGATGAGATCTCTGAAAAGCTGGGTGAGATAGATGCAGTGAATGCTCGAATTGATGGGCTACCTGTACAAGAGTTGACAATAAGGGTAGAGACCCTGGAAAGCA
AAGCTACTAAGCCTAGTAGCACTGAACGTGGGGAGAGCTCCACGAGTTCCGTCGACAAGACGACTTTTTCCCGTACTTGGTTGTCTTCTGATCTCTATACTATTGATGAT
TCTCTTCCATTCATCCTCAACATCCTCTTAGCAAATTTTGTTGGCTTGTTGGGAATTGCAATAGTCCTGTCATATGTACAGGTATTCTTCTTGTTGTTGCTACTGCCATT
CTGGTACATCTACAGTAAGCTTCAGTTCTTTTACAGGTCCACAGCTCGGGAATTGAGACGGCTTGATAGTGTTTCACGTTCTCCCATATATTCCTCCTTTACTGAGACTC
TTGACGGGTCTGCAACTATTAGAGCATTCAATTGTGAGGTGGTATTTTATATGAAGGTCCTGTGTGGCCGTGTTCAATCCAAAACAGTTATTTCCTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCGACCAAACAATTGGGAAAGACCCACGTTGAGCGACTTGTTGAGATAGAGGAACAGTTGCTATATTTGAGGGAAGTACCTGACTCGGTACGATATGTCGAAAG
TCGACTTGATGAGATCTCTGAAAAGCTGGGTGAGATAGATGCAGTGAATGCTCGAATTGATGGGCTACCTGTACAAGAGTTGACAATAAGGGTAGAGACCCTGGAAAGCA
AAGCTACTAAGCCTAGTAGCACTGAACGTGGGGAGAGCTCCACGAGTTCCGTCGACAAGACGACTTTTTCCCGTACTTGGTTGTCTTCTGATCTCTATACTATTGATGAT
TCTCTTCCATTCATCCTCAACATCCTCTTAGCAAATTTTGTTGGCTTGTTGGGAATTGCAATAGTCCTGTCATATGTACAGGTATTCTTCTTGTTGTTGCTACTGCCATT
CTGGTACATCTACAGTAAGCTTCAGTTCTTTTACAGGTCCACAGCTCGGGAATTGAGACGGCTTGATAGTGTTTCACGTTCTCCCATATATTCCTCCTTTACTGAGACTC
TTGACGGGTCTGCAACTATTAGAGCATTCAATTGTGAGGTGGTATTTTATATGAAGGTCCTGTGTGGCCGTGTTCAATCCAAAACAGTTATTTCCTGTTAG
Protein sequenceShow/hide protein sequence
MSATKQLGKTHVERLVEIEEQLLYLREVPDSVRYVESRLDEISEKLGEIDAVNARIDGLPVQELTIRVETLESKATKPSSTERGESSTSSVDKTTFSRTWLSSDLYTIDD
SLPFILNILLANFVGLLGIAIVLSYVQVFFLLLLLPFWYIYSKLQFFYRSTARELRRLDSVSRSPIYSSFTETLDGSATIRAFNCEVVFYMKVLCGRVQSKTVISC