CuGenDBv2

Gene ID	Spg038971
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like
Genome location	scaffold12:3901327..3901914
RNA-Seq Expression	Spg038971
Synteny	Spg038971
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005747 - mitochondrial respiratory chain complex I (cellular component) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR019342 - NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5

Homology

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GenBank top hits

e value

%identity

Alignment

KAE9461681.1 hypothetical protein C3L33_06414, partial [Rhododendron williamsianum]

3.4e-23

69.86

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPNSTLAHVFNIASEGGCLRF
        MASGWGITGNKGRCYDFW+DFS+CMSRCREPKDC+LLREDYLECLHHSKE+   +    HV+     G  +R+
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPNSTLAHVFNIASEGGCLRF

KAG6606963.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B, partial [Cucurbita argyrosperma subsp. sororia]

4.4e-23

90.91

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN
        MASGWGITGNKGRCYDFW+DFSDCMSRCREPKDCALLREDYLECLHHSKE    N
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN

XP_023521877.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita pepo subsp. pepo]

4.4e-23

90.91

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN
        MASGWGITGNKGRCYDFW+DFSDCMSRCREPKDCALLREDYLECLHHSKE    N
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN

XP_024027836.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Morus notabilis]

4.4e-23

90.91

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN
        MASGWGITGNKGRCYDFWVDFS+CMSRCREPKDC+LLREDYLECLHHSKE L  N
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN

XP_038905985.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Benincasa hispida]

4.4e-23

90.91

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN
        MASGWGITGNKGRCYDFW+DFSDCMSRCREPKDCALLREDYLECLHHSKE    N
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN

TrEMBL top hits

e value

%identity

Alignment

A0A0D2QZH4 Uncharacterized protein

2.8e-23

78.46

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKEL-LMPNSTLAHVFNI
        MASGWGI G KGRCYDFWVDFS+CMSRCREPKDCALLREDYLECLHHSKE+ ++P   L HV ++
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKEL-LMPNSTLAHVFNI

A0A6A4LZ46 Uncharacterized protein (Fragment)

1.6e-23

69.86

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPNSTLAHVFNIASEGGCLRF
        MASGWGITGNKGRCYDFW+DFS+CMSRCREPKDC+LLREDYLECLHHSKE+   +    HV+     G  +R+
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPNSTLAHVFNIASEGGCLRF

A0A6J1DNW8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like

2.1e-23

90.91

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN
        MASGWGITGNKGRCYDFW+DFSDCMSRCREPKDCALLREDYLECLHHSKE    N
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN

A0A6J1GA50 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like

2.1e-23

90.91

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN
        MASGWGITGNKGRCYDFW+DFSDCMSRCREPKDCALLREDYLECLHHSKE    N
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN

A0A6J1KEK7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like

2.1e-23

90.91

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN
        MASGWGITGNKGRCYDFW+DFSDCMSRCREPKDCALLREDYLECLHHSKE    N
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN

SwissProt top hits

e value

%identity

Alignment

O82238 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A

3.2e-24

85.45

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKE    N
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN

Q9LZI6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B

3.2e-24

85.45

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKE    N
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN

Arabidopsis top hits

e value

%identity

Alignment

AT2G47690.1 NADH-ubiquinone oxidoreductase-related

2.3e-25

85.45

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKE    N
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN

AT2G47690.2 NADH-ubiquinone oxidoreductase-related

1.7e-25

88.46

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELL
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKE++
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELL

AT3G62790.1 NADH-ubiquinone oxidoreductase-related

2.3e-25

85.45

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Query:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDC LLREDYLECLHHSKE    N
Subjt:  MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPN

Sequences

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CDS sequence

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ATGGCATCAGGGTGGGGAATCACCGGTAACAAGGGCCGATGCTACGATTTCTGGGTTGATTTCAGCGATTGTATGTCCCGCTGCCGAGAACCAAAGGACTGTGCTCTACT
CCGTGAAGATTACCTCGAGTGCCTCCACCATTCCAAGGAGCTTTTGATGCCTAATTCGACCTTGGCTCATGTTTTCAACATCGCATCCGAAGGTGGCTGCCTGAGATTTG
ATTTAGATCTGTTTTTCTATGTAACCTATTCATTGACAAAATTTCTGGAGAAACTTGAATTTGCGACTTCTTGGATTTTTGTGGCTTTAGGTGCTAGTGATCGATTAGGG
AAAGGTTGA

mRNA sequence

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Protein sequence

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MASGWGITGNKGRCYDFWVDFSDCMSRCREPKDCALLREDYLECLHHSKELLMPNSTLAHVFNIASEGGCLRFDLDLFFYVTYSLTKFLEKLEFATSWIFVALGASDRLG
KG

Spg038971 (gene) of Sponge gourd (cylindrica) v1 genome