; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038989 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038989
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRAB GTPase homolog A4C
Genome locationscaffold12:5632813..5635513
RNA-Seq ExpressionSpg038989
SyntenySpg038989
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR005225 - Small GTP-binding protein domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149604.1 ras-related protein RABA4c isoform X1 [Cucumis sativus]1.5e-11094.59Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARN+FSLDSKATIGVEFQTKTL IDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        Q+FDHIARWLEELRGHADKNIVIMLIGNKSDL SLRVVPTEDAKEFAQMENL FMETSALEATNVEAAFNTILTEIYRVIS+KALIAN+ETDSGGS+SLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQEPQPARSGCCRS
        KGTK+VVPGQEPQ A SGCCRS
Subjt:  KGTKLVVPGQEPQPARSGCCRS

XP_008461787.1 PREDICTED: ras-related protein RABA4c isoform X1 [Cucumis melo]1.0e-11195.05Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARN+FSLDSKATIGVEFQTKTL IDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        QSFDHIARWLEELRGHADKNIVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVIS+KAL+AN+ETDSGGS+SLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQEPQPARSGCCRS
        KGTK+VVPGQEPQ A SGCCRS
Subjt:  KGTKLVVPGQEPQPARSGCCRS

XP_022949337.1 ras-related protein RABA4c-like [Cucurbita moschata]1.7e-11195.05Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RN+FSLDSKATIGVEFQTKTLVIDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        Q+FDHIARWLEELR HADKNIVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGG++SLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQEPQPARSGCCRS
        KGTK+VVPGQEPQ A SGCCRS
Subjt:  KGTKLVVPGQEPQPARSGCCRS

XP_022998498.1 ras-related protein RABA4c-like [Cucurbita maxima]2.7e-11295.5Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RN+FSLDSKATIGVEFQTKTLVIDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        Q+FDHI RWLEELR HADKNIVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGS+SLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQEPQPARSGCCRS
        KGTK+VVPGQEPQPA SGCCRS
Subjt:  KGTKLVVPGQEPQPARSGCCRS

XP_023525670.1 ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo]1.7e-11195.05Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RN+FSLDSKATIGVEFQTKTLVIDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        Q+FDHIARWLEELR HADKNIVIMLIGNKSDL SLRVVPTEDAKEF+QMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGS+SLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQEPQPARSGCCRS
        KGTK+VVPGQEPQ A SGCCRS
Subjt:  KGTKLVVPGQEPQPARSGCCRS

TrEMBL top hitse value%identityAlignment
A0A0A0LEW7 Uncharacterized protein7.1e-11194.59Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARN+FSLDSKATIGVEFQTKTL IDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        Q+FDHIARWLEELRGHADKNIVIMLIGNKSDL SLRVVPTEDAKEFAQMENL FMETSALEATNVEAAFNTILTEIYRVIS+KALIAN+ETDSGGS+SLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQEPQPARSGCCRS
        KGTK+VVPGQEPQ A SGCCRS
Subjt:  KGTKLVVPGQEPQPARSGCCRS

A0A1S3CFD0 ras-related protein RABA4c isoform X14.9e-11295.05Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARN+FSLDSKATIGVEFQTKTL IDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        QSFDHIARWLEELRGHADKNIVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVIS+KAL+AN+ETDSGGS+SLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQEPQPARSGCCRS
        KGTK+VVPGQEPQ A SGCCRS
Subjt:  KGTKLVVPGQEPQPARSGCCRS

A0A6J1DGV8 ras-related protein RABA4d-like3.3e-10890.99Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNL SNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RN+FSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAML+YDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        QSFDHIARWLEELRGHADKNIVIMLIGNKSDL SLRVVPT+DA+EFAQMENLFFMETSALEATNVE AFNTILTEIY+VISRKAL+ANE+ DSGG++SLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQEPQPARSGCCRS
        KGTK+VVPGQE   A SGCCRS
Subjt:  KGTKLVVPGQEPQPARSGCCRS

A0A6J1GBR1 ras-related protein RABA4c-like8.4e-11295.05Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RN+FSLDSKATIGVEFQTKTLVIDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        Q+FDHIARWLEELR HADKNIVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGG++SLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQEPQPARSGCCRS
        KGTK+VVPGQEPQ A SGCCRS
Subjt:  KGTKLVVPGQEPQPARSGCCRS

A0A6J1KGX4 ras-related protein RABA4c-like1.3e-11295.5Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF RN+FSLDSKATIGVEFQTKTLVIDQK IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        Q+FDHI RWLEELR HADKNIVIMLIGNKSDL SLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGS+SLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQEPQPARSGCCRS
        KGTK+VVPGQEPQPA SGCCRS
Subjt:  KGTKLVVPGQEPQPARSGCCRS

SwissProt top hitse value%identityAlignment
P25766 Ras-related protein RGP12.3e-9883.64Show/hide
Query:  QKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARW
        QKIDYVFKVVLIGDSAVGKSQLL+RFARN+F+LDSKATIGVEFQT+TL ID +T+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARW
Subjt:  QKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARW

Query:  LEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLLKGTKLVVPG
        LEELRGHADKNIVIMLIGNKSDL +LRVVPTEDAKEFA+ ENLFFMETSALE+TNVE AF T+LTEIYR++S+K L+ANEE DS G++SLLKGTK+VVPG
Subjt:  LEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLLKGTKLVVPG

Query:  QEP-QPARSGCCRS
        QEP  P ++ CC S
Subjt:  QEP-QPARSGCCRS

Q40191 Ras-related protein Rab11A4.4e-8674.54Show/hide
Query:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIAR
        N KIDYVFKVVLIGDSAVGKSQ+L+RFARN+FSLDSK+TIGVEFQT+TLVID KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDHI R
Subjt:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIAR

Query:  WLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLLKGTKLVVP
        WLEELR HADKNIVI+LIGNK DL + R VPTEDAKEFA+ E LFF+ETSALEATNVE+AF T+LTEIY ++++K+L A+E   +G S S L G K+++P
Subjt:  WLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLLKGTKLVVP

Query:  G--QEPQPARSGCCRS
        G  QE    R+ CC++
Subjt:  G--QEPQPARSGCCRS

Q40522 Ras-related protein Rab11D3.5e-8369.96Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        M++   + +QKIDYVFKVVLIGDSAVGKSQ+L+RFARN+FSLDSKATIGVEFQT+TL I  K++KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        Q+FDHI RWLEELR HAD+NIVIMLIGNK+DL   R VPTEDAKEFAQ E LFF+ETSA+EATN+E AF T+LTEI+ ++++K L A ++  S G+ + L
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQ-EPQPARSGCCRS
         G K++VPG  +  P +  CC S
Subjt:  KGTKLVVPGQ-EPQPARSGCCRS

Q9FE79 Ras-related protein RABA4c1.3e-9880.45Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RN+FS++SKATIGVEFQT+TL ID+KTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        QSFDH+ARWLEELRGHADKNIVIMLIGNK+DL +LR VPTEDAKEFAQ ENLFFMETSAL++ NVE +F T+LTEIYR++S+K L+ANEE +SGG +SLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQEPQPARSGCC
        +GTK+VV G+E +    GCC
Subjt:  KGTKLVVPGQEPQPARSGCC

Q9LH50 Ras-related protein RABA4d1.9e-9780.45Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RFARN+FS+DSKATIGVEFQTKTLVID KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        QSFDH+A+WLEELRGHADKNIVIMLIGNK DL SLR VPTEDA+EFAQ ENLFFMETSALEATNVE AF TILTEIYR+IS+K+L A+++ D+ G++SLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQEPQPARSGCC
        KGT++++P ++    R GCC
Subjt:  KGTKLVVPGQEPQPARSGCC

Arabidopsis top hitse value%identityAlignment
AT1G16920.1 RAB GTPase homolog A1B1.4e-7162.98Show/hide
Query:  DYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEE
        DY+FKVVLIGDS VGKS LLSRF +N+F+L+SK+TIGVEF T+TL +D K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+R +F+++ RWL+E
Subjt:  DYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWLEE

Query:  LRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLLKGTKLVVPGQEP
        L+ H D NIV+ML+GNKSDLR L  VPTED K +A+ E+L FMETSALEATNVE AF  +LT+IYR+ S+K + A E+    G+ S+ KG K+ V     
Subjt:  LRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLLKGTKLVVPGQEP

Query:  QPARSGCC
           + GCC
Subjt:  QPARSGCC

AT3G12160.1 RAB GTPase homolog A4D1.4e-9880.45Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RFARN+FS+DSKATIGVEFQTKTLVID KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        QSFDH+A+WLEELRGHADKNIVIMLIGNK DL SLR VPTEDA+EFAQ ENLFFMETSALEATNVE AF TILTEIYR+IS+K+L A+++ D+ G++SLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQEPQPARSGCC
        KGT++++P ++    R GCC
Subjt:  KGTKLVVPGQEPQPARSGCC

AT4G39990.1 RAB GTPase homolog A4B3.1e-8271.5Show/hide
Query:  KIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWL
        K+DYVFKVVLIGDSAVGKSQLL+RFAR++FS+DSKATIGVEFQT+TL I+QK+IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+HI RWL
Subjt:  KIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWL

Query:  EELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLLKGTKLVVP--
        EELR HADKNIVI+LIGNKSDL   R VPTEDAKEFA+ E LFF+ETSAL ATNVE +FNT++T+IY  +++K L +  ++++ GS   L G K+++P  
Subjt:  EELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLLKGTKLVVP--

Query:  GQEPQPARSGCCRS
        GQE     S CC S
Subjt:  GQEPQPARSGCCRS

AT5G47960.1 RAB GTPase homolog A4C9.5e-10080.45Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RF+RN+FS++SKATIGVEFQT+TL ID+KTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL
        QSFDH+ARWLEELRGHADKNIVIMLIGNK+DL +LR VPTEDAKEFAQ ENLFFMETSAL++ NVE +F T+LTEIYR++S+K L+ANEE +SGG +SLL
Subjt:  QSFDHIARWLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLL

Query:  KGTKLVVPGQEPQPARSGCC
        +GTK+VV G+E +    GCC
Subjt:  KGTKLVVPGQEPQPARSGCC

AT5G65270.1 RAB GTPase homolog A4A1.1e-8270.51Show/hide
Query:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIAR
        +QKIDYVFKVVLIGDSAVGKSQ+L+R+AR++FSLDSKATIGVEFQT+TLVID K++KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDHI R
Subjt:  NQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIAR

Query:  WLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLLKGTKLVV-
        WLEELR HADKNIVI+LIGNKSDL   R +PTEDAKEFA+ E LFF+ETSA  ATNVE+AF+T+LTEI+ ++++K+L A+E+ ++G   S L G K+ + 
Subjt:  WLEELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLLKGTKLVV-

Query:  --PGQEPQPARSGCCRS
          PGQ      + CC S
Subjt:  --PGQEPQPARSGCCRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTATTCAAGGTCGTGTTGATCGGAGACTCTGCGGTGGGGAAATCGCAGCTTCTATCTCGTTTTGCTAG
GAATGATTTCAGTTTGGATTCCAAGGCGACAATTGGGGTTGAATTTCAGACGAAGACGCTTGTCATTGACCAGAAAACTATCAAGGCGCAGATATGGGATACTGCTGGAC
AGGAGAGGTATCGTGCAGTGACAAGTGCGTACTACAGAGGTGCTGTGGGGGCAATGCTAGTCTACGACATGACGAAGCGTCAGTCGTTTGATCATATAGCTAGGTGGTTA
GAGGAACTGCGTGGCCATGCAGACAAGAATATTGTTATAATGCTTATAGGAAACAAGTCCGATCTACGTTCTCTTCGCGTTGTGCCTACAGAAGATGCAAAAGAGTTTGC
TCAAATGGAGAATCTGTTTTTCATGGAAACATCAGCACTCGAGGCAACTAATGTAGAGGCAGCATTCAACACTATCCTGACAGAAATTTACCGAGTTATTAGCAGGAAGG
CACTGATTGCAAATGAGGAAACCGATTCTGGAGGAAGCACATCACTCCTCAAAGGAACAAAGCTTGTTGTCCCTGGACAAGAGCCCCAGCCTGCAAGATCTGGCTGTTGC
AGAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAATTTGCAATCGAATTTCAATCAGAAGATTGATTATGTATTCAAGGTCGTGTTGATCGGAGACTCTGCGGTGGGGAAATCGCAGCTTCTATCTCGTTTTGCTAG
GAATGATTTCAGTTTGGATTCCAAGGCGACAATTGGGGTTGAATTTCAGACGAAGACGCTTGTCATTGACCAGAAAACTATCAAGGCGCAGATATGGGATACTGCTGGAC
AGGAGAGGTATCGTGCAGTGACAAGTGCGTACTACAGAGGTGCTGTGGGGGCAATGCTAGTCTACGACATGACGAAGCGTCAGTCGTTTGATCATATAGCTAGGTGGTTA
GAGGAACTGCGTGGCCATGCAGACAAGAATATTGTTATAATGCTTATAGGAAACAAGTCCGATCTACGTTCTCTTCGCGTTGTGCCTACAGAAGATGCAAAAGAGTTTGC
TCAAATGGAGAATCTGTTTTTCATGGAAACATCAGCACTCGAGGCAACTAATGTAGAGGCAGCATTCAACACTATCCTGACAGAAATTTACCGAGTTATTAGCAGGAAGG
CACTGATTGCAAATGAGGAAACCGATTCTGGAGGAAGCACATCACTCCTCAAAGGAACAAAGCTTGTTGTCCCTGGACAAGAGCCCCAGCCTGCAAGATCTGGCTGTTGC
AGAAGTTGA
Protein sequenceShow/hide protein sequence
MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFARNDFSLDSKATIGVEFQTKTLVIDQKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHIARWL
EELRGHADKNIVIMLIGNKSDLRSLRVVPTEDAKEFAQMENLFFMETSALEATNVEAAFNTILTEIYRVISRKALIANEETDSGGSTSLLKGTKLVVPGQEPQPARSGCC
RS