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Spg039011 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039011
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGypsy/ty3 element polyprotein
Genome locationscaffold12:5022643..5026956
RNA-Seq ExpressionSpg039011
SyntenySpg039011
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033701.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]2.8e-0739.45Show/hide
Query:  EEIKETELNRLKKGRGGDRCKFKKLEMPIFVGVHPDSRLFRAERH---------------------RPSQEGSLCARLLVVKHEGIVAEFRKNYEIYSAL
        +E  ET L+ L+ G G DR KFKKLEMP+F G  PD  ++RAE +                     +  + G+ CAR L +K EG V E+ + +E  SA 
Subjt:  EEIKETELNRLKKGRGGDRCKFKKLEMPIFVGVHPDSRLFRAERH---------------------RPSQEGSLCARLLVVKHEGIVAEFRKNYEIYSAL

Query:  LLEMSEDSL
        L EM+ED L
Subjt:  LLEMSEDSL

KAA0057846.1 uncharacterized protein E6C27_scaffold274G001330 [Cucumis melo var. makuwa]6.6e-0943.18Show/hide
Query:  AEEDLHHILWSCNFATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIWG-FGVRETIELLEGWRGTQLRF
        AEEDL H+ W C++A  VW  F   F + FA  R +R  IEEFL + PF+D+G F +    CA + G FG R   E     RG+ +RF
Subjt:  AEEDLHHILWSCNFATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIWG-FGVRETIELLEGWRGTQLRF

KAA0066908.1 mitochondrial phosphate carrier protein 3 [Cucumis melo var. makuwa]2.7e-1048Show/hide
Query:  FATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIWGFGVRETIELLEGWRGTQLRFV
        FA  VW  FF  F   FA  R +R MIEEFL + PF+D+G FLW AG+CA +W    +    +L G RG  +RFV
Subjt:  FATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIWGFGVRETIELLEGWRGTQLRFV

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]4.6e-1047.76Show/hide
Query:  EEDLHHILWSCNFATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIWGF
        EEDL H+LW C   + VWD+F   F L +ARHR +R  +EEFL   P  ++G FLW A + A++ GF
Subjt:  EEDLHHILWSCNFATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIWGF

XP_016900613.1 PREDICTED: uncharacterized protein LOC107990976 [Cucumis melo]1.1e-0848.44Show/hide
Query:  EDLHHILWSCNFATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIW
        EDL H+L     A+ +WD F   F L +ARHR +R MIEEFL   P  ++G+FLW+A +CA +W
Subjt:  EDLHHILWSCNFATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIW

TrEMBL top hitse value%identityAlignment
A0A1S4DXB1 uncharacterized protein LOC1079909765.4e-0948.44Show/hide
Query:  EDLHHILWSCNFATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIW
        EDL H+L     A+ +WD F   F L +ARHR +R MIEEFL   P  ++G+FLW+A +CA +W
Subjt:  EDLHHILWSCNFATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIW

A0A5A7SW87 Gypsy/ty3 element polyprotein1.3e-0739.45Show/hide
Query:  EEIKETELNRLKKGRGGDRCKFKKLEMPIFVGVHPDSRLFRAERH---------------------RPSQEGSLCARLLVVKHEGIVAEFRKNYEIYSAL
        +E  ET L+ L+ G G DR KFKKLEMP+F G  PD  ++RAE +                     +  + G+ CAR L +K EG V E+ + +E  SA 
Subjt:  EEIKETELNRLKKGRGGDRCKFKKLEMPIFVGVHPDSRLFRAERH---------------------RPSQEGSLCARLLVVKHEGIVAEFRKNYEIYSAL

Query:  LLEMSEDSL
        L EM+ED L
Subjt:  LLEMSEDSL

A0A5A7UUK8 Uncharacterized protein3.2e-0943.18Show/hide
Query:  AEEDLHHILWSCNFATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIWG-FGVRETIELLEGWRGTQLRF
        AEEDL H+ W C++A  VW  F   F + FA  R +R  IEEFL + PF+D+G F +    CA + G FG R   E     RG+ +RF
Subjt:  AEEDLHHILWSCNFATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIWG-FGVRETIELLEGWRGTQLRF

A0A5A7VGR5 Mitochondrial phosphate carrier protein 31.3e-1048Show/hide
Query:  FATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIWGFGVRETIELLEGWRGTQLRFV
        FA  VW  FF  F   FA  R +R MIEEFL + PF+D+G FLW AG+CA +W    +    +L G RG  +RFV
Subjt:  FATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIWGFGVRETIELLEGWRGTQLRFV

A0A5D3CI74 Calpain-type cysteine protease DEK12.2e-1047.76Show/hide
Query:  EEDLHHILWSCNFATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIWGF
        EEDL H+LW C   + VWD+F   F L +ARHR +R  +EEFL   P  ++G FLW A + A++ GF
Subjt:  EEDLHHILWSCNFATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIWGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGGAAGACCTTCACCACATTTTGTGGAGCTGCAATTTTGCTACTGCTGTTTGGGACGAGTTCTTTGGCTTGTTCAGCTTGCAGTTTGCCAGACACAGAGGCCT
TAGAGAGATGATTGAGGAGTTCCTTCCCTATCCTCCTTTTCAGGATCAGGGAAAGTTTTTGTGGCAAGCTGGGATCTGCGCTAATATTTGGGGCTTTGGGGTGAGAGAAA
CAATAGAACTTTTAGAGGGCTGGAGAGGGACTCAGTTGAGGTTTGTCGATGCACAAACAGAAGAAGAAGGTGGACTCGGAAGTCAAGGGAACACTGAAGAAATAAAGGAA
ACAGAGCTCAACCGATTGAAGAAGGGACGAGGAGGAGATCGTTGTAAGTTCAAGAAACTTGAAATGCCAATTTTCGTGGGGGTTCATCCAGACTCTAGGCTTTTTCGAGC
GGAAAGACATCGACCATCACAGGAGGGTAGCCTCTGTGCGAGACTTTTGGTGGTGAAACACGAAGGAATCGTTGCAGAATTCAGGAAAAACTATGAGATATATTCAGCGT
TGCTGCTGGAGATGTCTGAGGATTCATTGAAACCACCTTCCTCAATAGCCTCAACCCTGCGATTAAGGAAGAAGTTTTGTGACGAGAAGTACATCGCAAATCATCGCTAC
AAGATTCGCGAGGCTAGAAAGCTATTTGTTTTAAAAGGCACGCGCCCGGGCGCGGCTAGGCGCAACCTTAGCGCCTCGCATCAAAGAAGCGAGGCTCTTCTTGGATCTAA
AAATATCCTAGATATTTCTATCCTTATCCTTTTCTCAAGGAATTCTAGAATTCCTTTGGAGCCTAAAGCCGTCAGCCACCACAACCGCCATCGTCGTCGTCTTCCGCCTG
CGAGTGCGCCACCGTCCGACCTAGACCCTAGAAGTTTCGGCTCCGAGCAGCGCTGTTCGTGCCAAGAAGCCGCACCAGTTTGTGACCCGCGACTACAGGTGCTCGCGACT
CGATCTGCTGAGTTCGCGTTGCCGCCCACTCGCGTCCGCCACTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGGAAGACCTTCACCACATTTTGTGGAGCTGCAATTTTGCTACTGCTGTTTGGGACGAGTTCTTTGGCTTGTTCAGCTTGCAGTTTGCCAGACACAGAGGCCT
TAGAGAGATGATTGAGGAGTTCCTTCCCTATCCTCCTTTTCAGGATCAGGGAAAGTTTTTGTGGCAAGCTGGGATCTGCGCTAATATTTGGGGCTTTGGGGTGAGAGAAA
CAATAGAACTTTTAGAGGGCTGGAGAGGGACTCAGTTGAGGTTTGTCGATGCACAAACAGAAGAAGAAGGTGGACTCGGAAGTCAAGGGAACACTGAAGAAATAAAGGAA
ACAGAGCTCAACCGATTGAAGAAGGGACGAGGAGGAGATCGTTGTAAGTTCAAGAAACTTGAAATGCCAATTTTCGTGGGGGTTCATCCAGACTCTAGGCTTTTTCGAGC
GGAAAGACATCGACCATCACAGGAGGGTAGCCTCTGTGCGAGACTTTTGGTGGTGAAACACGAAGGAATCGTTGCAGAATTCAGGAAAAACTATGAGATATATTCAGCGT
TGCTGCTGGAGATGTCTGAGGATTCATTGAAACCACCTTCCTCAATAGCCTCAACCCTGCGATTAAGGAAGAAGTTTTGTGACGAGAAGTACATCGCAAATCATCGCTAC
AAGATTCGCGAGGCTAGAAAGCTATTTGTTTTAAAAGGCACGCGCCCGGGCGCGGCTAGGCGCAACCTTAGCGCCTCGCATCAAAGAAGCGAGGCTCTTCTTGGATCTAA
AAATATCCTAGATATTTCTATCCTTATCCTTTTCTCAAGGAATTCTAGAATTCCTTTGGAGCCTAAAGCCGTCAGCCACCACAACCGCCATCGTCGTCGTCTTCCGCCTG
CGAGTGCGCCACCGTCCGACCTAGACCCTAGAAGTTTCGGCTCCGAGCAGCGCTGTTCGTGCCAAGAAGCCGCACCAGTTTGTGACCCGCGACTACAGGTGCTCGCGACT
CGATCTGCTGAGTTCGCGTTGCCGCCCACTCGCGTCCGCCACTGCTGA
Protein sequenceShow/hide protein sequence
MAEEDLHHILWSCNFATAVWDEFFGLFSLQFARHRGLREMIEEFLPYPPFQDQGKFLWQAGICANIWGFGVRETIELLEGWRGTQLRFVDAQTEEEGGLGSQGNTEEIKE
TELNRLKKGRGGDRCKFKKLEMPIFVGVHPDSRLFRAERHRPSQEGSLCARLLVVKHEGIVAEFRKNYEIYSALLLEMSEDSLKPPSSIASTLRLRKKFCDEKYIANHRY
KIREARKLFVLKGTRPGAARRNLSASHQRSEALLGSKNILDISILILFSRNSRIPLEPKAVSHHNRHRRRLPPASAPPSDLDPRSFGSEQRCSCQEAAPVCDPRLQVLAT
RSAEFALPPTRVRHC