CuGenDBv2

Gene ID	Spg039030
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Acidic endochitinase-like
Genome location	scaffold12:1223734..1224972
RNA-Seq Expression	Spg039030
Synteny	Spg039030
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process) GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domains	IPR001223 - Glycoside hydrolase family 18, catalytic domain IPR017853 - Glycoside hydrolase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

CAB4271531.1 unnamed protein product [Prunus armeniaca]

2.3e-25

51.61

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP
        ++ AP C +PD +L  AI+ GLFDYVWVQFYN+  C+F D   +        W +W    AK+VFL G+PAAPE AAP+  FI   +L S+VLP IK  P
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP

Query:  LYGGVMLWSREFDHGYGNDIKDYV
         YGGVMLWS+++D+GY   IKD V
Subjt:  LYGGVMLWSREFDHGYGNDIKDYV

CAB4271535.1 unnamed protein product [Prunus armeniaca]

1.0e-25

51.61

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP
        ++ AP C +PD +L  AI+ GLFDYVWVQFYN+  C+F D   +        W +W    AK+VFL G+PAAPE AAP+  FI   +L S+VLP IK  P
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP

Query:  LYGGVMLWSREFDHGYGNDIKDYV
         YGGVMLWS+++D+GY + IKD V
Subjt:  LYGGVMLWSREFDHGYGNDIKDYV

KAB2598725.1 acidic endochitinase-like [Pyrus ussuriensis x Pyrus communis]

8.0e-26

50.81

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP
        ++ AP C  PD +L  AI+ GLFDYVWVQFYN+  C++ D      D     W++W  +PA +VFL G+PAAPE AAP+  FI   +L S+VLP IK  P
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP

Query:  LYGGVMLWSREFDHGYGNDIKDYV
         YGGVMLWSR++D+GY   I D +
Subjt:  LYGGVMLWSREFDHGYGNDIKDYV

QEE82233.1 basic endochitinase [Siraitia grosvenorii]

1.4e-25

53.66

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNSSCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDPL
        ++ AP C +PD +L AAI  GLFDYVWVQFYN+    Y S    N      WRRW  +PAK++FL G+PAAP  AAP+  FI    LIS++LP IK  P 
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNSSCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDPL

Query:  YGGVMLWSREFDHGYGNDIKDYV
        YGGVMLWS+ FD+GY + IK  V
Subjt:  YGGVMLWSREFDHGYGNDIKDYV

XP_008362796.3 acidic endochitinase-like [Malus domestica]

8.0e-26

51.61

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP
        ++ AP C  PD +L AAI+ GLFDYVWVQFYN+  C++ D      D     W +W  +PA +VF+ G+PAAPE AAP+  FI   +L S+VLP IK  P
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP

Query:  LYGGVMLWSREFDHGYGNDIKDYV
         YGGVMLWSR +D+GY   IKD +
Subjt:  LYGGVMLWSREFDHGYGNDIKDYV

TrEMBL top hits

e value

%identity

Alignment

A0A498KPG4 Glyco_hydro_18 domain-containing protein

3.9e-26

51.61

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP
        ++ AP C  PD +L AAI+ GLFDYVWVQFYN+  C++ D      D     W +W  +PA +VF+ G+PAAPE AAP+  FI   +L S+VLP IK  P
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP

Query:  LYGGVMLWSREFDHGYGNDIKDYV
         YGGVMLWSR +D+GY   IKD +
Subjt:  LYGGVMLWSREFDHGYGNDIKDYV

A0A5B9G8T4 Basic endochitinase

6.6e-26

53.66

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNSSCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDPL
        ++ AP C +PD +L AAI  GLFDYVWVQFYN+    Y S    N      WRRW  +PAK++FL G+PAAP  AAP+  FI    LIS++LP IK  P 
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNSSCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDPL

Query:  YGGVMLWSREFDHGYGNDIKDYV
        YGGVMLWS+ FD+GY + IK  V
Subjt:  YGGVMLWSREFDHGYGNDIKDYV

A0A5N5F6U0 Acidic endochitinase-like

3.9e-26

50.81

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP
        ++ AP C  PD +L  AI+ GLFDYVWVQFYN+  C++ D      D     W++W  +PA +VFL G+PAAPE AAP+  FI   +L S+VLP IK  P
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP

Query:  LYGGVMLWSREFDHGYGNDIKDYV
         YGGVMLWSR++D+GY   I D +
Subjt:  LYGGVMLWSREFDHGYGNDIKDYV

A0A6J5U5I3 Glyco_hydro_18 domain-containing protein

1.1e-25

51.61

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP
        ++ AP C +PD +L  AI+ GLFDYVWVQFYN+  C+F D   +        W +W    AK+VFL G+PAAPE AAP+  FI   +L S+VLP IK  P
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP

Query:  LYGGVMLWSREFDHGYGNDIKDYV
         YGGVMLWS+++D+GY   IKD V
Subjt:  LYGGVMLWSREFDHGYGNDIKDYV

A0A6J5U8Y3 Glyco_hydro_18 domain-containing protein

5.1e-26

51.61

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP
        ++ AP C +PD +L  AI+ GLFDYVWVQFYN+  C+F D   +        W +W    AK+VFL G+PAAPE AAP+  FI   +L S+VLP IK  P
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP

Query:  LYGGVMLWSREFDHGYGNDIKDYV
         YGGVMLWS+++D+GY + IKD V
Subjt:  LYGGVMLWSREFDHGYGNDIKDYV

SwissProt top hits

e value

%identity

Alignment

P17541 Acidic endochitinase

3.2e-25

50.41

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP
        +S AP C  PD +L AAI+ GLFD VWVQFYN+  C F D+     D     W +W   P  K+++ G+PAA E AAP+  FI    LIS+VLP IK   
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP

Query:  LYGGVMLWSREFDHGYGNDIK
         YGGVMLWS+ FD+GY + IK
Subjt:  LYGGVMLWSREFDHGYGNDIK

P23472 Hevamine-A

7.8e-24

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNSSCRFYDSRFDRNDGFFFEWRRW-QHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP
        ++ AP C +PD YL  A+  GLFDYVWVQFYN+    Y S    N      W RW   I A K+FL G+PAAPEAA     ++    LISR+LP IKK P
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNSSCRFYDSRFDRNDGFFFEWRRW-QHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP

Query:  LYGGVMLWSREFD--HGYGNDIKDYV
         YGGVMLWS+ +D  +GY + I D V
Subjt:  LYGGVMLWSREFD--HGYGNDIKDYV

P29060 Acidic endochitinase

1.5e-22

46.28

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP
        ++ AP C +PD +L  A+  GLFDYVWVQFYN+  C++     D    +   W +W  I A K+FL G+PAA  AA     FI    L+S+VLP I   P
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP

Query:  LYGGVMLWSREFDHGYGNDIK
         YGGVMLWS+ +D+GY + IK
Subjt:  LYGGVMLWSREFDHGYGNDIK

P36908 Acidic endochitinase

1.1e-22

46.83

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP
        +S AP C YPD +L +AI+ GLFDYVWVQFYN+  C++ +      +     W +W    AK+VFL G+PA+ +AAAP+   I    L S+VLP IK  P
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNS-SCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDP

Query:  LYGGVMLWSR--EFDHGYGNDIKDYV
         YGGVM+W R  +   GY N IK  V
Subjt:  LYGGVMLWSR--EFDHGYGNDIKDYV

P36910 Acidic endochitinase SE2

6.6e-23

46.34

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Query:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNSSCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDPL
        +S AP C  PD  L  AI  GLFDYVWVQFYN+    YD+     D     W +W  + A ++FL G+PA+ +AA     FI   +L S+VLP IK    
Subjt:  MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNSSCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDPL

Query:  YGGVMLWSREFDHGYGNDIKDYV
        YGGVMLWS+ +D GY + IK  V
Subjt:  YGGVMLWSREFDHGYGNDIKDYV

Arabidopsis top hits

e value

%identity

Alignment

AT5G24090.1 chitinase A

7.0e-20

42.37

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Query:  APGCQYPDGYLMAAIRAGLFDYVWVQFYNSSCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDPLYGG
        AP C +PD  + +A+    FDYVW+QFYN+    Y S   +N   F  W +W    A + F  G+PAAPEAA     +I    L S++LP +KK   YGG
Subjt:  APGCQYPDGYLMAAIRAGLFDYVWVQFYNSSCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDPLYGG

Query:  VMLWSREFD--HGYGNDI
        VMLWS+ +D  +GY + I
Subjt:  VMLWSREFD--HGYGNDI

Sequences

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CDS sequence

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ATGAGTTATGCTCCGGGATGCCAATATCCTGACGGTTACTTGATGGCTGCCATAAGGGCTGGTTTGTTTGATTATGTTTGGGTTCAATTCTACAACAGTTCATGTCGATT
CTACGACAGTAGGTTCGATCGAAATGACGGCTTCTTTTTTGAATGGCGTCGTTGGCAACATATTCCAGCTAAGAAAGTGTTCTTAGCTGGAATACCGGCAGCTCCTGAAG
CAGCAGCGCCAAATGATGCATTTATTGAAGTAGGATCGCTTATTTCAAGAGTTCTTCCCCGAATTAAGAAGGATCCCTTGTATGGAGGAGTTATGCTTTGGAGTAGGGAA
TTTGACCATGGATATGGTAATGATATTAAGGACTACGTCTAG

mRNA sequence

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Protein sequence

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MSYAPGCQYPDGYLMAAIRAGLFDYVWVQFYNSSCRFYDSRFDRNDGFFFEWRRWQHIPAKKVFLAGIPAAPEAAAPNDAFIEVGSLISRVLPRIKKDPLYGGVMLWSRE
FDHGYGNDIKDYV

Spg039030 (gene) of Sponge gourd (cylindrica) v1 genome