; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039090 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039090
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold13:22397800..22412969
RNA-Seq ExpressionSpg039090
SyntenySpg039090
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]2.0e-2239.83Show/hide
Query:  VYKLNPKLYLVSC----RVFE---NEEFDVYFINFGSVLRKLWVLEVR---------PEAIWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHR
        V+K N KLYL+      R+     + +F + ++       +LWVLEVR         P      + T  I      PL  LSVL DNDAVVSAG+APL +
Subjt:  VYKLNPKLYLVSC----RVFE---NEEFDVYFINFGSVLRKLWVLEVR---------PEAIWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHR

Query:  RTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHI---VNVLFNVQEGQRVS
        R       W C T                 P T+  +     + +T  VEIELPVPD LPTSAESS S+SSTW+ELY ESVH+     V+   +  Q   
Subjt:  RTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHI---VNVLFNVQEGQRVS

Query:  L------EEDDVRWLHTIFRAKLVGGPGGAL
        L        DDV WLH IFRAK  GGPGG +
Subjt:  L------EEDDVRWLHTIFRAKLVGGPGGAL

KAA0053207.1 hypothetical protein E6C27_scaffold1192G00340 [Cucumis melo var. makuwa]1.7e-2141.75Show/hide
Query:  VYKLNPKLYLVSCRVFENEEFDVYFINFGSVLRKLWVLEVR---------PEAIWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHRRTSKRWL
        +YKLN KLYLVSC VFENEEF VYFINFG VLRKLWVLEVR         P      + TG +      PL  LSVLRDNDAV                 
Subjt:  VYKLNPKLYLVSCRVFENEEFDVYFINFGSVLRKLWVLEVR---------PEAIWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHRRTSKRWL

Query:  YWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHI-------------VNVLFNVQEGQ
                                                 VEIELP P+ LPTSAESS S+SSTW+ELY E VH+             +++LF V +GQ
Subjt:  YWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHI-------------VNVLFNVQEGQ

Query:  RVSLEE
        + SLEE
Subjt:  RVSLEE

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]1.1e-2249.68Show/hide
Query:  LLMLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAES
        L  LSVLRDNDAVVSAG            RAPLHRRTSKRWLYWACPT RRS+ML +    V  +P                 VEIEL VPDTLPTSAES
Subjt:  LLMLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAES

Query:  SSSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHTIFRAKLVGGPGGAL
        S S+S         S  IV                DDV WLH +FRAK  GGPGG++
Subjt:  SSSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHTIFRAKLVGGPGGAL

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]1.1e-2249.68Show/hide
Query:  LLMLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAES
        L  LSVLRDNDAVVSAG            RAPLHRRTSKRWLYWACPT RRS+ML +    V  +P                 VEIEL VPDTLPTSAES
Subjt:  LLMLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAES

Query:  SSSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHTIFRAKLVGGPGGAL
        S S+S         S  IV                DDV WLH +FRAK  GGPGG++
Subjt:  SSSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHTIFRAKLVGGPGGAL

TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa]2.0e-2239.83Show/hide
Query:  VYKLNPKLYLVSC----RVFE---NEEFDVYFINFGSVLRKLWVLEVR---------PEAIWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHR
        V+K N KLYL+      R+     + +F + ++       +LWVLEVR         P      + T  I      PL  LSVL DNDAVVSAG+APL +
Subjt:  VYKLNPKLYLVSC----RVFE---NEEFDVYFINFGSVLRKLWVLEVR---------PEAIWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHR

Query:  RTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHI---VNVLFNVQEGQRVS
        R       W C T                 P T+  +     + +T  VEIELPVPD LPTSAESS S+SSTW+ELY ESVH+     V+   +  Q   
Subjt:  RTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHI---VNVLFNVQEGQRVS

Query:  L------EEDDVRWLHTIFRAKLVGGPGGAL
        L        DDV WLH IFRAK  GGPGG +
Subjt:  L------EEDDVRWLHTIFRAKLVGGPGGAL

TrEMBL top hitse value%identityAlignment
A0A5A7T7M6 Reverse transcriptase9.5e-2339.83Show/hide
Query:  VYKLNPKLYLVSC----RVFE---NEEFDVYFINFGSVLRKLWVLEVR---------PEAIWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHR
        V+K N KLYL+      R+     + +F + ++       +LWVLEVR         P      + T  I      PL  LSVL DNDAVVSAG+APL +
Subjt:  VYKLNPKLYLVSC----RVFE---NEEFDVYFINFGSVLRKLWVLEVR---------PEAIWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHR

Query:  RTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHI---VNVLFNVQEGQRVS
        R       W C T                 P T+  +     + +T  VEIELPVPD LPTSAESS S+SSTW+ELY ESVH+     V+   +  Q   
Subjt:  RTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHI---VNVLFNVQEGQRVS

Query:  L------EEDDVRWLHTIFRAKLVGGPGGAL
        L        DDV WLH IFRAK  GGPGG +
Subjt:  L------EEDDVRWLHTIFRAKLVGGPGGAL

A0A5A7UFD2 Uncharacterized protein8.0e-2241.75Show/hide
Query:  VYKLNPKLYLVSCRVFENEEFDVYFINFGSVLRKLWVLEVR---------PEAIWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHRRTSKRWL
        +YKLN KLYLVSC VFENEEF VYFINFG VLRKLWVLEVR         P      + TG +      PL  LSVLRDNDAV                 
Subjt:  VYKLNPKLYLVSCRVFENEEFDVYFINFGSVLRKLWVLEVR---------PEAIWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHRRTSKRWL

Query:  YWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHI-------------VNVLFNVQEGQ
                                                 VEIELP P+ LPTSAESS S+SSTW+ELY E VH+             +++LF V +GQ
Subjt:  YWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHI-------------VNVLFNVQEGQ

Query:  RVSLEE
        + SLEE
Subjt:  RVSLEE

A0A5A7VGQ5 Uncharacterized protein5.6e-2349.68Show/hide
Query:  LLMLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAES
        L  LSVLRDNDAVVSAG            RAPLHRRTSKRWLYWACPT RRS+ML +    V  +P                 VEIEL VPDTLPTSAES
Subjt:  LLMLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAES

Query:  SSSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHTIFRAKLVGGPGGAL
        S S+S         S  IV                DDV WLH +FRAK  GGPGG++
Subjt:  SSSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHTIFRAKLVGGPGGAL

A0A5D3BG85 Uncharacterized protein5.6e-2349.68Show/hide
Query:  LLMLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAES
        L  LSVLRDNDAVVSAG            RAPLHRRTSKRWLYWACPT RRS+ML +    V  +P                 VEIEL VPDTLPTSAES
Subjt:  LLMLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAES

Query:  SSSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHTIFRAKLVGGPGGAL
        S S+S         S  IV                DDV WLH +FRAK  GGPGG++
Subjt:  SSSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHTIFRAKLVGGPGGAL

A0A5D3BTP3 Reverse transcriptase9.5e-2339.83Show/hide
Query:  VYKLNPKLYLVSC----RVFE---NEEFDVYFINFGSVLRKLWVLEVR---------PEAIWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHR
        V+K N KLYL+      R+     + +F + ++       +LWVLEVR         P      + T  I      PL  LSVL DNDAVVSAG+APL +
Subjt:  VYKLNPKLYLVSC----RVFE---NEEFDVYFINFGSVLRKLWVLEVR---------PEAIWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHR

Query:  RTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHI---VNVLFNVQEGQRVS
        R       W C T                 P T+  +     + +T  VEIELPVPD LPTSAESS S+SSTW+ELY ESVH+     V+   +  Q   
Subjt:  RTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHI---VNVLFNVQEGQRVS

Query:  L------EEDDVRWLHTIFRAKLVGGPGGAL
        L        DDV WLH IFRAK  GGPGG +
Subjt:  L------EEDDVRWLHTIFRAKLVGGPGGAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCCAACTTTGCTCCGTTTTGAGTTTTTCAGAGTTTGGAACACAAAGTTCGGTCCAATGAGAGATCTTTACGTGGTTTGGACGAGCAGGTCCAAACTTTTCTCCGT
TCAAGTTTTGGAGATTTTGGAACAGAAAGTTCAACCCTATGAGAGGTCTTCAGGTGGTGTGGAGGACACATGGTCCAAACTTTGCTCCGTTTCTGTTTTTGAGAGCTCGG
AACCCAAAGTTCGTCCCAATGAGAGTTTTTCATCTTGTTTGGAGGAACTTGGTCCAAAGTTTGCTCCGTTGGAGTTTTGGAGAGTTTGGAACTCAAAGTTCGGCCAAATG
AGAGTTCTTCAGGTGGTGTGGACAACACATGGTCCAAACTTTGCTCCAAGTTGGTCCAAACTTGGCTCCGTCGGAGTTTTGGAGAGTTTGGAACTCAAAGTTCGGCCGAA
TGAGAGTTCTTTAGGTGGTTTGGACAAAGATGGTCCAAATTTTGCTCTGTTTGAGTTTTGGAGAGATGATGGAAGAGATTGTCGAGCGTCACGACGCTATGCCTTTGGAT
ATGGAATGAATCTCTCGGATCAACATAGCGTCGAGACGCTATGGGTGCAGCGTCGAGACGCTGCAGCTTCAACTTGGCGTCCACGAAAGCACAGGATTTTCGAGCAAACC
AGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCTGGGGTGTACAAGTTGAATCCGAAGCTCTATTTGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGT
GTATTTCATTAATTTTGGTTCAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGATGTTGA
GTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGATC
ATGTTAGCCCGGATTGGGGGTAGCGTCGCGACGCTACCTTGCACAGCGTCGCGACGCTGCAACGCACGCGGCTTGGGCAACACGAAAAGGGTAGAGATCGAGCTCCCGGT
GCCTGATACACTGCCAACATCTGCTGAAAGCTCCAGCTCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAACGTTCAGG
AGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACACCATCTTTCGGGCTAAGCTAGTAGGTGGTCCGGGAGGGGCGTTGCGACGCTATGCCTTCAGA
TATGGAATGAATCTCTCGGATCAACATAGCGTCGAGACGCTGCAGCTTCAGCTTGGCGCCCACGAAGAGAGCTTGAAACACAAAGTTCGATTGAATGAGAGATCTTTAGG
TGGTTTGGACAAAGAAGGTCCAAACTTTGCTCCGGGGTTGAGTGTTGTGGCTAGTGCGGTGGGGAAGCTAGTTTGCCTGGATAACGCAGCTGAGGAGCGTCATCGGTTGT
CCTTCGCTGGGGTTTGCGTTGAGATTGGGGTTGAGGATGTGTTGCCTTCCTCTATTACAGTACGTTGTAGAGGAGTGGATTTTGAGCTCCTGGTGGAATATGCTTGGAGG
TCAAAACAGTGTTTGACTTGTAGGGTGTTTGGCCACTTAGGGTCAAACTGTCCCAAAGAAGCTCGGTCTGCCCCTCAGGTCCCTTCTCAGCCTTCGTCTTCTTTGGGTAC
TAATCAGTTGAGGGCTCACAAGCGATCTCCACAGAAGGCTCCTCTGAAGTCTCCCCCTAGGGGGTCGGGGTGCTTGCCAGTTATTCCCTTTACGGCTCTAGGAGGTGATG
ACGAGTCTAAGGCTCTTGCGTTGATTAAGGAGAATGTGGATCCTCCACCATTAGCTTTGGACTCTCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCCCAACTTTGCTCCGTTTTGAGTTTTTCAGAGTTTGGAACACAAAGTTCGGTCCAATGAGAGATCTTTACGTGGTTTGGACGAGCAGGTCCAAACTTTTCTCCGT
TCAAGTTTTGGAGATTTTGGAACAGAAAGTTCAACCCTATGAGAGGTCTTCAGGTGGTGTGGAGGACACATGGTCCAAACTTTGCTCCGTTTCTGTTTTTGAGAGCTCGG
AACCCAAAGTTCGTCCCAATGAGAGTTTTTCATCTTGTTTGGAGGAACTTGGTCCAAAGTTTGCTCCGTTGGAGTTTTGGAGAGTTTGGAACTCAAAGTTCGGCCAAATG
AGAGTTCTTCAGGTGGTGTGGACAACACATGGTCCAAACTTTGCTCCAAGTTGGTCCAAACTTGGCTCCGTCGGAGTTTTGGAGAGTTTGGAACTCAAAGTTCGGCCGAA
TGAGAGTTCTTTAGGTGGTTTGGACAAAGATGGTCCAAATTTTGCTCTGTTTGAGTTTTGGAGAGATGATGGAAGAGATTGTCGAGCGTCACGACGCTATGCCTTTGGAT
ATGGAATGAATCTCTCGGATCAACATAGCGTCGAGACGCTATGGGTGCAGCGTCGAGACGCTGCAGCTTCAACTTGGCGTCCACGAAAGCACAGGATTTTCGAGCAAACC
AGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCTGGGGTGTACAAGTTGAATCCGAAGCTCTATTTGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGT
GTATTTCATTAATTTTGGTTCAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGATGTTGA
GTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGATC
ATGTTAGCCCGGATTGGGGGTAGCGTCGCGACGCTACCTTGCACAGCGTCGCGACGCTGCAACGCACGCGGCTTGGGCAACACGAAAAGGGTAGAGATCGAGCTCCCGGT
GCCTGATACACTGCCAACATCTGCTGAAAGCTCCAGCTCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAACGTTCAGG
AGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACACCATCTTTCGGGCTAAGCTAGTAGGTGGTCCGGGAGGGGCGTTGCGACGCTATGCCTTCAGA
TATGGAATGAATCTCTCGGATCAACATAGCGTCGAGACGCTGCAGCTTCAGCTTGGCGCCCACGAAGAGAGCTTGAAACACAAAGTTCGATTGAATGAGAGATCTTTAGG
TGGTTTGGACAAAGAAGGTCCAAACTTTGCTCCGGGGTTGAGTGTTGTGGCTAGTGCGGTGGGGAAGCTAGTTTGCCTGGATAACGCAGCTGAGGAGCGTCATCGGTTGT
CCTTCGCTGGGGTTTGCGTTGAGATTGGGGTTGAGGATGTGTTGCCTTCCTCTATTACAGTACGTTGTAGAGGAGTGGATTTTGAGCTCCTGGTGGAATATGCTTGGAGG
TCAAAACAGTGTTTGACTTGTAGGGTGTTTGGCCACTTAGGGTCAAACTGTCCCAAAGAAGCTCGGTCTGCCCCTCAGGTCCCTTCTCAGCCTTCGTCTTCTTTGGGTAC
TAATCAGTTGAGGGCTCACAAGCGATCTCCACAGAAGGCTCCTCTGAAGTCTCCCCCTAGGGGGTCGGGGTGCTTGCCAGTTATTCCCTTTACGGCTCTAGGAGGTGATG
ACGAGTCTAAGGCTCTTGCGTTGATTAAGGAGAATGTGGATCCTCCACCATTAGCTTTGGACTCTCCCTAG
Protein sequenceShow/hide protein sequence
MVPTLLRFEFFRVWNTKFGPMRDLYVVWTSRSKLFSVQVLEILEQKVQPYERSSGGVEDTWSKLCSVSVFESSEPKVRPNESFSSCLEELGPKFAPLEFWRVWNSKFGQM
RVLQVVWTTHGPNFAPSWSKLGSVGVLESLELKVRPNESSLGGLDKDGPNFALFEFWRDDGRDCRASRRYAFGYGMNLSDQHSVETLWVQRRDAAASTWRPRKHRIFEQT
RRISGVLWCFEHSGVYKLNPKLYLVSCRVFENEEFDVYFINFGSVLRKLWVLEVRPEAIWYRVHTGYIPLLMLSVLRDNDAVVSAGRAPLHRRTSKRWLYWACPTQRRSI
MLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHTIFRAKLVGGPGGALRRYAFR
YGMNLSDQHSVETLQLQLGAHEESLKHKVRLNERSLGGLDKEGPNFAPGLSVVASAVGKLVCLDNAAEERHRLSFAGVCVEIGVEDVLPSSITVRCRGVDFELLVEYAWR
SKQCLTCRVFGHLGSNCPKEARSAPQVPSQPSSSLGTNQLRAHKRSPQKAPLKSPPRGSGCLPVIPFTALGGDDESKALALIKENVDPPPLALDSP