; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039092 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039092
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold13:23023282..23024718
RNA-Seq ExpressionSpg039092
SyntenySpg039092
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY08849.1 Uncharacterized protein TCM_024087 [Theobroma cacao]1.7e-1935.11Show/hide
Query:  RFINALARTKYQ-EMLRRDFLFERGFGDDLPHF--LRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVPLNAAVREVGIEGSQWRLLK
        +FI+  A T+Y   ++ +  + ERG    +  +  +   I +  W QFC +PD     +VRE YAN+   E   G+              + G+QW+   
Subjt:  RFINALARTKYQ-EMLRRDFLFERGFGDDLPHF--LRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVPLNAAVREVGIEGSQWRLLK

Query:  TEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGV
         E  +F+ + +K E   WL F+  RLL +TH S V++D  +LI+AI+   SIDVGK+IS+ I +  R K   + FP+ IT LC RAGV
Subjt:  TEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGV

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]5.3e-2129.88Show/hide
Query:  IRFINALARTKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVPLN-----------
        ++F    A T+Y+  ++ R    E+GF  D       LP F+   I    W QFC  P+     +VRE YAN+ +  E    VRGV ++           
Subjt:  IRFINALARTKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVPLN-----------

Query:  ---------------------AAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEI
                               +  V + G++W +      T   + L   A  W  F+K  LLPTTH  TVS+D ++L+ ++L   SI+VG++I +EI
Subjt:  ---------------------AAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEI

Query:  FNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKGIVDTPNLAHFSE
          C  +K G LFFP+ IT LCR A  P +  +  L + G +D   +A  ++
Subjt:  FNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKGIVDTPNLAHFSE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.1e-2130.68Show/hide
Query:  IRFINALARTKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVPLN-----------
        ++F    A T+Y+  ++ R    E+GF  D       LP F+   I    W QFC  P+     +VRE YAN+ + EE    VRGV ++           
Subjt:  IRFINALARTKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVPLN-----------

Query:  ---------------------AAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEI
                               +  V   G++W +      T   + L   A  W  F+K RLLPTTH  TVS+D ++L+ ++L   SI+VG++I +EI
Subjt:  ---------------------AAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEI

Query:  FNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKGIVDTPNLAHFSE
          C  +K G LFFP+ IT LCR A  P +  +  L + G +D   +A  ++
Subjt:  FNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKGIVDTPNLAHFSE

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]2.2e-1928.15Show/hide
Query:  IRFINALARTKYQEMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRG--VPLNA---------
        ++F +  A  +Y+E ++       ++F+++     + P F+   I    W  FC  P+     +VRE Y N+ N ++    +RG  VPL+          
Subjt:  IRFINALARTKYQEMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRG--VPLNA---------

Query:  ---------------------AVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIF
                              +  V I G++W +      T   + L   A  W  F+K RLLPTTH  TVS++ V L++++L   SI+VG++I  EI 
Subjt:  ---------------------AVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIF

Query:  NCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKG
         C  +K G LFFP+ IT +CR    P +  +  L + G
Subjt:  NCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKG

TYG52543.1 hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]8.5e-1935.64Show/hide
Query:  KYQEMLRRDFLFERGFG---DDL---PHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVP------LNAAVREVGIEGSQWRLLK
        K+Q M+      E+GFG   +DL   P  +R  I  L W +FC      +  +VRE YA++   +  + IVR         L   +  V   GSQW +  
Subjt:  KYQEMLRRDFLFERGFG---DDL---PHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVP------LNAAVREVGIEGSQWRLLK

Query:  TEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGV
            + Q  YLK  A  W  F++   +P +H ST+S + ++L++AIL   SI+VGKII  EI NC +KK    +FP+ IT LC +A V
Subjt:  TEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGV

TrEMBL top hitse value%identityAlignment
A0A061F2U9 Uncharacterized protein8.2e-2035.11Show/hide
Query:  RFINALARTKYQ-EMLRRDFLFERGFGDDLPHF--LRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVPLNAAVREVGIEGSQWRLLK
        +FI+  A T+Y   ++ +  + ERG    +  +  +   I +  W QFC +PD     +VRE YAN+   E   G+              + G+QW+   
Subjt:  RFINALARTKYQ-EMLRRDFLFERGFGDDLPHF--LRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVPLNAAVREVGIEGSQWRLLK

Query:  TEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGV
         E  +F+ + +K E   WL F+  RLL +TH S V++D  +LI+AI+   SIDVGK+IS+ I +  R K   + FP+ IT LC RAGV
Subjt:  TEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGV

A0A2P5AGA5 Uncharacterized protein (Fragment)2.6e-2129.88Show/hide
Query:  IRFINALARTKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVPLN-----------
        ++F    A T+Y+  ++ R    E+GF  D       LP F+   I    W QFC  P+     +VRE YAN+ +  E    VRGV ++           
Subjt:  IRFINALARTKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVPLN-----------

Query:  ---------------------AAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEI
                               +  V + G++W +      T   + L   A  W  F+K  LLPTTH  TVS+D ++L+ ++L   SI+VG++I +EI
Subjt:  ---------------------AAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEI

Query:  FNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKGIVDTPNLAHFSE
          C  +K G LFFP+ IT LCR A  P +  +  L + G +D   +A  ++
Subjt:  FNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKGIVDTPNLAHFSE

A0A2P5BCG4 Uncharacterized protein (Fragment)5.2e-2230.68Show/hide
Query:  IRFINALARTKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVPLN-----------
        ++F    A T+Y+  ++ R    E+GF  D       LP F+   I    W QFC  P+     +VRE YAN+ + EE    VRGV ++           
Subjt:  IRFINALARTKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVPLN-----------

Query:  ---------------------AAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEI
                               +  V   G++W +      T   + L   A  W  F+K RLLPTTH  TVS+D ++L+ ++L   SI+VG++I +EI
Subjt:  ---------------------AAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEI

Query:  FNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKGIVDTPNLAHFSE
          C  +K G LFFP+ IT LCR A  P +  +  L + G +D   +A  ++
Subjt:  FNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKGIVDTPNLAHFSE

A0A2P5DAQ2 Uncharacterized protein1.1e-1928.15Show/hide
Query:  IRFINALARTKYQEMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRG--VPLNA---------
        ++F +  A  +Y+E ++       ++F+++     + P F+   I    W  FC  P+     +VRE Y N+ N ++    +RG  VPL+          
Subjt:  IRFINALARTKYQEMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRG--VPLNA---------

Query:  ---------------------AVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIF
                              +  V I G++W +      T   + L   A  W  F+K RLLPTTH  TVS++ V L++++L   SI+VG++I  EI 
Subjt:  ---------------------AVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIF

Query:  NCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKG
         C  +K G LFFP+ IT +CR    P +  +  L + G
Subjt:  NCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKG

A0A5D2B8V0 Uncharacterized protein4.1e-1935.64Show/hide
Query:  KYQEMLRRDFLFERGFG---DDL---PHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVP------LNAAVREVGIEGSQWRLLK
        K+Q M+      E+GFG   +DL   P  +R  I  L W +FC      +  +VRE YA++   +  + IVR         L   +  V   GSQW +  
Subjt:  KYQEMLRRDFLFERGFG---DDL---PHFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVP------LNAAVREVGIEGSQWRLLK

Query:  TEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGV
            + Q  YLK  A  W  F++   +P +H ST+S + ++L++AIL   SI+VGKII  EI NC +KK    +FP+ IT LC +A V
Subjt:  TEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILIFAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAAACAAGAGCAAGAAAAGAGAGGGATAATGAGGAAGAAGAGGTGCCTGTCACTCCTGAGGTTCAGAAAGTAAAAGCAAAGAAGAAGAAAACACCGGAGGAAAA
AGAAGCTAAAAGAAGACGAAGACAACAACGGGCTAAGGAGCAAGAAGCTGTCCAAAAGGAGACAGACGAGGTTACTACTACAGTGGAAGAAGGAAATCCGAAAGAACCTG
AGGTGCAGAACCCAGAGGCGGTCGAACTAATAGTCGCAGATACGGAAGGAGTTCAAGAAGAGAATACTGAGGAGATTCAAGAAAAGCAGACTGATGAGATGCAAGAAGAA
CAGGCAGAGCGAAAGGCTGGACGCGTCCAAGTAATTCGAACTGATACCCCATCACCACCATCGTCGGATTCTGAGAAAGAGAAGGCAGAACGAGAGGAACGAGAGAAGAA
GGAAGCTGAGGACAGAGAGAGAGAAGAAGCAGCAGAAGAAACTTTGAGAAAGCTTAGAGAAGACAGAGGCAAAGGAATTGCTGAAGCATCGGATGAACCTGAAGAGGAAG
CAAGGGAAGGACCTTTCATCCGCTTCATCAATGCGCTTGCTCGAACAAAATACCAAGAGATGCTAAGAAGAGATTTCTTATTCGAAAGAGGGTTTGGTGACGATCTACCA
CATTTCTTGAGAGCAGGAATCGCAAATCTTGGGTGGAGTCAGTTCTGTACGAAGCCAGACCCAGTGAATTCGAATATTGTTCGAGAAGTTTACGCAAATATTGATAATGC
AGAGGAATTTCAGGGCATAGTTCGAGGAGTACCTTTGAATGCGGCGGTCCGGGAGGTGGGAATTGAAGGGTCTCAATGGAGGCTATTAAAGACAGAGAAACGCACGTTTC
AAGCGGCTTATCTAAAGAGTGAAGCCAATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTGCCGACTACGCATGATTCGACAGTGTCTCGCGACTGTGTGATTCTGATA
TTCGCAATTCTTCGAGCCTTAAGTATTGATGTTGGAAAAATAATTTCGAATGAGATCTTTAATTGCTGGCGCAAAAAGGTGGGGAAGCTGTTTTTCCCGAACACGATCAC
GATGCTATGCAGAAGGGCAGGAGTGCCCACGGTTCCAGAGGATGTGGTTTTGCTTGACAAGGGAATCGTCGATACGCCTAATCTGGCGCACTTCAGCGAACGCAAGAGGC
ACGCCAGGGTGGGCTTGTGTGTGGAATTCATCAAATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAAACAAGAGCAAGAAAAGAGAGGGATAATGAGGAAGAAGAGGTGCCTGTCACTCCTGAGGTTCAGAAAGTAAAAGCAAAGAAGAAGAAAACACCGGAGGAAAA
AGAAGCTAAAAGAAGACGAAGACAACAACGGGCTAAGGAGCAAGAAGCTGTCCAAAAGGAGACAGACGAGGTTACTACTACAGTGGAAGAAGGAAATCCGAAAGAACCTG
AGGTGCAGAACCCAGAGGCGGTCGAACTAATAGTCGCAGATACGGAAGGAGTTCAAGAAGAGAATACTGAGGAGATTCAAGAAAAGCAGACTGATGAGATGCAAGAAGAA
CAGGCAGAGCGAAAGGCTGGACGCGTCCAAGTAATTCGAACTGATACCCCATCACCACCATCGTCGGATTCTGAGAAAGAGAAGGCAGAACGAGAGGAACGAGAGAAGAA
GGAAGCTGAGGACAGAGAGAGAGAAGAAGCAGCAGAAGAAACTTTGAGAAAGCTTAGAGAAGACAGAGGCAAAGGAATTGCTGAAGCATCGGATGAACCTGAAGAGGAAG
CAAGGGAAGGACCTTTCATCCGCTTCATCAATGCGCTTGCTCGAACAAAATACCAAGAGATGCTAAGAAGAGATTTCTTATTCGAAAGAGGGTTTGGTGACGATCTACCA
CATTTCTTGAGAGCAGGAATCGCAAATCTTGGGTGGAGTCAGTTCTGTACGAAGCCAGACCCAGTGAATTCGAATATTGTTCGAGAAGTTTACGCAAATATTGATAATGC
AGAGGAATTTCAGGGCATAGTTCGAGGAGTACCTTTGAATGCGGCGGTCCGGGAGGTGGGAATTGAAGGGTCTCAATGGAGGCTATTAAAGACAGAGAAACGCACGTTTC
AAGCGGCTTATCTAAAGAGTGAAGCCAATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTGCCGACTACGCATGATTCGACAGTGTCTCGCGACTGTGTGATTCTGATA
TTCGCAATTCTTCGAGCCTTAAGTATTGATGTTGGAAAAATAATTTCGAATGAGATCTTTAATTGCTGGCGCAAAAAGGTGGGGAAGCTGTTTTTCCCGAACACGATCAC
GATGCTATGCAGAAGGGCAGGAGTGCCCACGGTTCCAGAGGATGTGGTTTTGCTTGACAAGGGAATCGTCGATACGCCTAATCTGGCGCACTTCAGCGAACGCAAGAGGC
ACGCCAGGGTGGGCTTGTGTGTGGAATTCATCAAATCTTAG
Protein sequenceShow/hide protein sequence
MEKTRARKERDNEEEEVPVTPEVQKVKAKKKKTPEEKEAKRRRRQQRAKEQEAVQKETDEVTTTVEEGNPKEPEVQNPEAVELIVADTEGVQEENTEEIQEKQTDEMQEE
QAERKAGRVQVIRTDTPSPPSSDSEKEKAEREEREKKEAEDREREEAAEETLRKLREDRGKGIAEASDEPEEEAREGPFIRFINALARTKYQEMLRRDFLFERGFGDDLP
HFLRAGIANLGWSQFCTKPDPVNSNIVREVYANIDNAEEFQGIVRGVPLNAAVREVGIEGSQWRLLKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDCVILI
FAILRALSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCRRAGVPTVPEDVVLLDKGIVDTPNLAHFSERKRHARVGLCVEFIKS