; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039098 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039098
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold13:22960246..22962935
RNA-Seq ExpressionSpg039098
SyntenySpg039098
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE1178059.1 unnamed protein product [Sepia pharaonis]3.2e-0436.73Show/hide
Query:  LASGSDQPLIQAEFRMVSRPSHLASGSDQPLIQAEFRMVSRPSHLASGSDQPLIQAEFRMVPRPSHLASDSDQPLIQAEFRMITCPSHLVLGSDQPLI
        L S S  P I         P HL S SD P I         P HL S    P I       P PSHL S SD P I         PSHL+  S  P I
Subjt:  LASGSDQPLIQAEFRMVSRPSHLASGSDQPLIQAEFRMVSRPSHLASGSDQPLIQAEFRMVPRPSHLASDSDQPLIQAEFRMITCPSHLVLGSDQPLI
CAE1322405.1 unnamed protein product [Sepia pharaonis]6.8e-0740Show/hide
Query:  TSLASGSDQPLIQAEFRMVSRPSHLASGSDQPLIQAEFRMVSRPSHLASGSDQPLIQAEFRMVPRPSHLASDSDQPLIQAEFRMITCPSHLVLGSDQPLI
        T L S S  P I         PSHL S SD P I         P+HL S SD P I       P PSHL S S  P I         PSHL+  SD P I
Subjt:  TSLASGSDQPLIQAEFRMVSRPSHLASGSDQPLIQAEFRMVSRPSHLASGSDQPLIQAEFRMVPRPSHLASDSDQPLIQAEFRMITCPSHLVLGSDQPLI
TrEMBL top hitse value%identityAlignment
A0A7S4AVG6 Hypothetical protein4.6e-0933.53Show/hide
Query:  FDEDLSFDLQFCRRSFNPRFLLRAFSSSFLSAPLKWKRTPLFIEFSLDGSRGGHSFTSLASGSDQPLIQAEFRMVS--RPSHLASGSDQPLIQAEFRMVS
        FD+D +   +  R S +P+   RAF   F S       TP              S  S  SG D PL++ EF  VS   PSH  +G    L++ EF  VS
Subjt:  FDEDLSFDLQFCRRSFNPRFLLRAFSSSFLSAPLKWKRTPLFIEFSLDGSRGGHSFTSLASGSDQPLIQAEFRMVS--RPSHLASGSDQPLIQAEFRMVS

Query:  --RPSHLASGSDQPLIQAEFRMV--PRPSHLASDSDQPLIQAEFRMIT--CPSHLVLGSDQPLIQVE
           PSH  +G   PL++ EF  V  P PS+       PL++ EF  ++   PSH   G   PL  V+
Subjt:  --RPSHLASGSDQPLIQAEFRMV--PRPSHLASDSDQPLIQAEFRMIT--CPSHLVLGSDQPLIQVE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTCACTCGAGGGCTGGAGCGCTTGTTCTCGAATTTGAAGTCGTCTCAAGGGCTTTGCAGCTTGTTCTTGAGATTGAAGTTGTCTCAAGGGTTTTGCAGCTTGTT
CTTGAGATTGAAGTTGTCTCAAGGGCTTTGTAGCTTGTTCTTAAGATTGAAGTTGTTCGCAGGAGATTCTGAGCTTCAGTCTTCGGTTTTGCAGGAGGATTTGGATGATC
TGAGCTTCGATTTTCAGTTCTGCGGATCAGAACTTCGTTCTTCAGTTCTGCGTCGGTATTTGAAGATGATCAGAGCCTTGTTCTTCAGTTCTGCAGCTGGGTTTGATGAG
GATCTGAGCTTTGATCTTCAATTCTGCAGAAGGAGCTTCAATCCTCGGTTTCTTCTAAGAGCTTTCTCTTCTTCCTTTCTTTCTGCTCCCCTCAAGTGGAAGAGAACCCC
TCTATTTATAGAGTTCTCGCTGGATGGGTCCCGGGGTGGTCATTCTTTCACTTCTCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCAGAATTCAGGATGGTCTCTC
GCCCTTCTCATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGGTCTCTCGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAG
GCGGAATTCAGGATGGTCCCTCGCCCTTCACATCTTGCCTCAGACAGTGATCAACCCTTGATTCAGGCGGAATTCAGGATGATCACTTGCCCTTCACATCTTGTCTTAGG
TAGTGATCAACCCTTGATTCAGGTGGAATGCAGGCTGGTCACTCGTCCACTTGCCCCGCCAACCTTTGAAGATGAAGCGAGGTTGAAGCTGTCAACCACCAACATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTCACTCGAGGGCTGGAGCGCTTGTTCTCGAATTTGAAGTCGTCTCAAGGGCTTTGCAGCTTGTTCTTGAGATTGAAGTTGTCTCAAGGGTTTTGCAGCTTGTT
CTTGAGATTGAAGTTGTCTCAAGGGCTTTGTAGCTTGTTCTTAAGATTGAAGTTGTTCGCAGGAGATTCTGAGCTTCAGTCTTCGGTTTTGCAGGAGGATTTGGATGATC
TGAGCTTCGATTTTCAGTTCTGCGGATCAGAACTTCGTTCTTCAGTTCTGCGTCGGTATTTGAAGATGATCAGAGCCTTGTTCTTCAGTTCTGCAGCTGGGTTTGATGAG
GATCTGAGCTTTGATCTTCAATTCTGCAGAAGGAGCTTCAATCCTCGGTTTCTTCTAAGAGCTTTCTCTTCTTCCTTTCTTTCTGCTCCCCTCAAGTGGAAGAGAACCCC
TCTATTTATAGAGTTCTCGCTGGATGGGTCCCGGGGTGGTCATTCTTTCACTTCTCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCAGAATTCAGGATGGTCTCTC
GCCCTTCTCATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGGTCTCTCGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTCAG
GCGGAATTCAGGATGGTCCCTCGCCCTTCACATCTTGCCTCAGACAGTGATCAACCCTTGATTCAGGCGGAATTCAGGATGATCACTTGCCCTTCACATCTTGTCTTAGG
TAGTGATCAACCCTTGATTCAGGTGGAATGCAGGCTGGTCACTCGTCCACTTGCCCCGCCAACCTTTGAAGATGAAGCGAGGTTGAAGCTGTCAACCACCAACATTTGA
Protein sequenceShow/hide protein sequence
MCFTRGLERLFSNLKSSQGLCSLFLRLKLSQGFCSLFLRLKLSQGLCSLFLRLKLFAGDSELQSSVLQEDLDDLSFDFQFCGSELRSSVLRRYLKMIRALFFSSAAGFDE
DLSFDLQFCRRSFNPRFLLRAFSSSFLSAPLKWKRTPLFIEFSLDGSRGGHSFTSLASGSDQPLIQAEFRMVSRPSHLASGSDQPLIQAEFRMVSRPSHLASGSDQPLIQ
AEFRMVPRPSHLASDSDQPLIQAEFRMITCPSHLVLGSDQPLIQVECRLVTRPLAPPTFEDEARLKLSTTNI