| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa] | 6.7e-18 | 53.92 | Show/hide |
Query: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFIS------------------MISIFIMFNVQEGQWVSLEEDDVRWLHAIFRAKLAGGPGGG
PLSTLSVLRDNDAV+EIELPVPDTLPTSAESS ++S ++ M + ++F+V G + DDV WLHA+FRAK GGPGGG
Subjt: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFIS------------------MISIFIMFNVQEGQWVSLEEDDVRWLHAIFRAKLAGGPGGG
Query: VT
VT
Subjt: VT
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| KAA0066851.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.6e-19 | 64.71 | Show/hide |
Query: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFISMISIFIMFNVQEGQWVS--LEEDDVRWLHAIFRAKLAGGPGGGV
PLSTLSVLRDNDAV+EIELPVPDTLPTSAESS ++S + + +++ F E W++ + EDDV WLHA+FRAK AGGPGGGV
Subjt: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFISMISIFIMFNVQEGQWVS--LEEDDVRWLHAIFRAKLAGGPGGGV
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| TYK25935.1 gag/pol protein [Cucumis melo var. makuwa] | 8.7e-18 | 45.51 | Show/hide |
Query: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESS-RTSSKW---FISMISIFIMFN-----------VQEGQWVSLEEDDVRWLHAIFRAKLAGGPGGGVTR
PLSTLSVLRDNDAV+EIELP+PDTLPTSAESS SS W + + + ++F EG + DDV WLHAIFRAK AGGPGGGVT
Subjt: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESS-RTSSKW---FISMISIFIMFN-----------VQEGQWVSLEEDDVRWLHAIFRAKLAGGPGGGVTR
Query: CSVSVFKNLEHKVRPNERSSGGLDNTWSIIRSVGVLASLENKLRPNERSERIGIPN
S SV + R + SS W VL + KL P + PN
Subjt: CSVSVFKNLEHKVRPNERSSGGLDNTWSIIRSVGVLASLENKLRPNERSERIGIPN
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| TYK26572.1 putative Retrotransposon protein [Cucumis melo var. makuwa] | 6.7e-18 | 53.92 | Show/hide |
Query: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFIS------------------MISIFIMFNVQEGQWVSLEEDDVRWLHAIFRAKLAGGPGGG
PLSTLSVLRDNDAV+EIELPVPDTLPTSAESS ++S ++ M + ++F+V G + DDV WLHA+FRAK GGPGGG
Subjt: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFIS------------------MISIFIMFNVQEGQWVSLEEDDVRWLHAIFRAKLAGGPGGG
Query: VT
VT
Subjt: VT
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| TYK27998.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.6e-19 | 64.71 | Show/hide |
Query: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFISMISIFIMFNVQEGQWVS--LEEDDVRWLHAIFRAKLAGGPGGGV
PLSTLSVLRDNDAV+EIELPVPDTLPTSAESS ++S + + +++ F E W++ + EDDV WLHA+FRAK AGGPGGGV
Subjt: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFISMISIFIMFNVQEGQWVS--LEEDDVRWLHAIFRAKLAGGPGGGV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9P7 Gag/pol protein | 4.2e-18 | 45.51 | Show/hide |
Query: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESS-RTSSKW---FISMISIFIMFN-----------VQEGQWVSLEEDDVRWLHAIFRAKLAGGPGGGVTR
PLSTLSVLRDNDAV+EIELP+PDTLPTSAESS SS W + + + ++F EG + DDV WLHAIFRAK AGGPGGGVT
Subjt: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESS-RTSSKW---FISMISIFIMFN-----------VQEGQWVSLEEDDVRWLHAIFRAKLAGGPGGGVTR
Query: CSVSVFKNLEHKVRPNERSSGGLDNTWSIIRSVGVLASLENKLRPNERSERIGIPN
S SV + R + SS W VL + KL P + PN
Subjt: CSVSVFKNLEHKVRPNERSSGGLDNTWSIIRSVGVLASLENKLRPNERSERIGIPN
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| A0A5A7V9N3 Reverse transcriptase | 3.2e-18 | 53.92 | Show/hide |
Query: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFIS------------------MISIFIMFNVQEGQWVSLEEDDVRWLHAIFRAKLAGGPGGG
PLSTLSVLRDNDAV+EIELPVPDTLPTSAESS ++S ++ M + ++F+V G + DDV WLHA+FRAK GGPGGG
Subjt: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFIS------------------MISIFIMFNVQEGQWVSLEEDDVRWLHAIFRAKLAGGPGGG
Query: VT
VT
Subjt: VT
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| A0A5A7VMG9 Reverse transcriptase | 7.7e-20 | 64.71 | Show/hide |
Query: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFISMISIFIMFNVQEGQWVS--LEEDDVRWLHAIFRAKLAGGPGGGV
PLSTLSVLRDNDAV+EIELPVPDTLPTSAESS ++S + + +++ F E W++ + EDDV WLHA+FRAK AGGPGGGV
Subjt: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFISMISIFIMFNVQEGQWVS--LEEDDVRWLHAIFRAKLAGGPGGGV
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| A0A5D3DSY7 Putative Retrotransposon protein | 3.2e-18 | 53.92 | Show/hide |
Query: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFIS------------------MISIFIMFNVQEGQWVSLEEDDVRWLHAIFRAKLAGGPGGG
PLSTLSVLRDNDAV+EIELPVPDTLPTSAESS ++S ++ M + ++F+V G + DDV WLHA+FRAK GGPGGG
Subjt: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFIS------------------MISIFIMFNVQEGQWVSLEEDDVRWLHAIFRAKLAGGPGGG
Query: VT
VT
Subjt: VT
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| A0A5D3DX39 Reverse transcriptase | 7.7e-20 | 64.71 | Show/hide |
Query: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFISMISIFIMFNVQEGQWVS--LEEDDVRWLHAIFRAKLAGGPGGGV
PLSTLSVLRDNDAV+EIELPVPDTLPTSAESS ++S + + +++ F E W++ + EDDV WLHA+FRAK AGGPGGGV
Subjt: PLSTLSVLRDNDAVIEIELPVPDTLPTSAESSRTSSKWFISMISIFIMFNVQEGQWVS--LEEDDVRWLHAIFRAKLAGGPGGGV
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