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Spg039112 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039112
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMitochondrial transcription factor 1
Genome locationscaffold13:22828728..22836779
RNA-Seq ExpressionSpg039112
SyntenySpg039112
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB3468399.1 unnamed protein product [Digitaria exilis]6.4e-1052.75Show/hide
Query:  SLVYFPRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTWKFL-LSR
        S +Y PRLPM MP PG  VT V LI +LP P EMQSSP A+   +I+ P + PM MPSVLGL  GA  +T +    L   T  WK L LSR
Subjt:  SLVYFPRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTWKFL-LSR

GER48275.1 mitochondrial transcription factor 1 [Striga asiatica]3.5e-0858.21Show/hide
Query:  YFPRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLT
        YFPRLPML+PCPG H T VT   + PSP + QSSPV I + VI +  +R M  PSVLGL  GA M T
Subjt:  YFPRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLT

GER53395.1 pleiotropic drug resistance 1 [Striga asiatica]5.6e-0643.04Show/hide
Query:  PRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTW
        PRLP LMP PG   T       +P   +MQSSPV I++  + +  + PM MPSVLGL +GA++ + V + L+Q + L W
Subjt:  PRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTW

KAB8082535.1 hypothetical protein EE612_004442, partial [Oryza sativa]1.6e-0544.57Show/hide
Query:  SLVYFPRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTWKFLLSRDV
        SL+ FPRLPMLMP PG  +T  T    +P P EMQSSPV +   V+V   D    MPSVLGL  GA +          P   TW   L  D+
Subjt:  SLVYFPRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTWKFLLSRDV

KAE8645717.1 hypothetical protein Csa_020484 [Cucumis sativus]3.0e-1264.29Show/hide
Query:  SPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTWKFLLSRDVILFIVEL
        S  EMQ + V I+DF I IP DR MC+PSV G  SGAIMLT  NVR   PR LTWKFLLS DVIL  +EL
Subjt:  SPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTWKFLLSRDVILFIVEL

TrEMBL top hitse value%identityAlignment
A0A0A0K1V8 Uncharacterized protein6.6e-1365.71Show/hide
Query:  SPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTWKFLLSRDVILFIVEL
        S  EMQ S V I+DF I IP DR MC+PSV G  SGAIMLT  NVR   PR LTWKFLLS DVIL  +EL
Subjt:  SPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTWKFLLSRDVILFIVEL

A0A0P0VBN4 Os01g0891066 protein3.9e-0544.32Show/hide
Query:  FPRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTWKFLLSRDV
        FPRLPMLMP PG H T       LP P E QSSPV +         D  MC+PSV GL +GA  +T   V      T TW   L  D+
Subjt:  FPRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTWKFLLSRDV

A0A0P0Y0T9 Os11g0249700 protein3.9e-0544.44Show/hide
Query:  PRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTWKFLLSRDVILF
        PRLPML+PCPG H  L      +P P E QSSPV           D    MPSVLGL +GA + T  +V   Q +  T  FLLS  V  F
Subjt:  PRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTWKFLLSRDVILF

A0A5A7QSC8 Mitochondrial transcription factor 11.7e-0858.21Show/hide
Query:  YFPRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLT
        YFPRLPML+PCPG H T VT   + PSP + QSSPV I + VI +  +R M  PSVLGL  GA M T
Subjt:  YFPRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLT

A0A5A7R6T0 Pleiotropic drug resistance 12.7e-0643.04Show/hide
Query:  PRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTW
        PRLP LMP PG   T       +P   +MQSSPV I++  + +  + PM MPSVLGL +GA++ + V + L+Q + L W
Subjt:  PRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPMCMPSVLGLFSGAIMLTLVNVRLLQPRTLTW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAGTGTGCTTGGATGGGTTCTCCTCTCAACTTGAGATTGATGTTCTAAATGGCATTGCATGGGATAGCGACAAGAGTATCTTCACCAGGTGCCTTTCCTCAAT
TGTGAATGAAGGTTGTGTTATGGGTTTAGAAGTGCATATTCCTGTTTTTTCAGGTTCTTCATTAGTGTATTTCCCAAGACTTCCAATGCTTATGCCATGTCCTGGCCTGC
ATGTCACGTTGGTGACTTTGATTCGTTTGCTTCCATCTCCAAGGGAAATGCAATCATCTCCTGTTGCGATTCAGGACTTTGTGATTGTGATCCCATTTGATCGACCAATG
TGTATGCCATCCGTGTTGGGGCTATTTTCTGGTGCAATTATGTTAACACTAGTGAATGTGAGGTTGTTGCAGCCTAGGACATTGACATGGAAGTTCTTGCTATCAAGAGA
TGTAATTCTCTTTATAGTTGAATTGGGAAAACAACATGAGATCGAGCCTCAACAGTTACTCGAGTATTGGAGGCTTCGGGAGTGGATTATACGAATTGCCACTAATTCGG
AGGATTTAGAGAACGCTGGAATTACATGTAGTGTCGAGATGCTACGCTTAGCGTCTCGATGCTACCCCGATAAAGAGCCAGAGGCGGGCGAACAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAAGTGTGCTTGGATGGGTTCTCCTCTCAACTTGAGATTGATGTTCTAAATGGCATTGCATGGGATAGCGACAAGAGTATCTTCACCAGGTGCCTTTCCTCAAT
TGTGAATGAAGGTTGTGTTATGGGTTTAGAAGTGCATATTCCTGTTTTTTCAGGTTCTTCATTAGTGTATTTCCCAAGACTTCCAATGCTTATGCCATGTCCTGGCCTGC
ATGTCACGTTGGTGACTTTGATTCGTTTGCTTCCATCTCCAAGGGAAATGCAATCATCTCCTGTTGCGATTCAGGACTTTGTGATTGTGATCCCATTTGATCGACCAATG
TGTATGCCATCCGTGTTGGGGCTATTTTCTGGTGCAATTATGTTAACACTAGTGAATGTGAGGTTGTTGCAGCCTAGGACATTGACATGGAAGTTCTTGCTATCAAGAGA
TGTAATTCTCTTTATAGTTGAATTGGGAAAACAACATGAGATCGAGCCTCAACAGTTACTCGAGTATTGGAGGCTTCGGGAGTGGATTATACGAATTGCCACTAATTCGG
AGGATTTAGAGAACGCTGGAATTACATGTAGTGTCGAGATGCTACGCTTAGCGTCTCGATGCTACCCCGATAAAGAGCCAGAGGCGGGCGAACAAAAGTAG
Protein sequenceShow/hide protein sequence
MMEVCLDGFSSQLEIDVLNGIAWDSDKSIFTRCLSSIVNEGCVMGLEVHIPVFSGSSLVYFPRLPMLMPCPGLHVTLVTLIRLLPSPREMQSSPVAIQDFVIVIPFDRPM
CMPSVLGLFSGAIMLTLVNVRLLQPRTLTWKFLLSRDVILFIVELGKQHEIEPQQLLEYWRLREWIIRIATNSEDLENAGITCSVEMLRLASRCYPDKEPEAGEQK