CuGenDBv2

Gene ID	Spg039221
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Genome location	scaffold10:41402576..41404319
RNA-Seq Expression	Spg039221
Synteny	Spg039221
Gene Ontology terms	GO:0009507 - chloroplast (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6578783.1 hypothetical protein SDJN03_23231, partial [Cucurbita argyrosperma subsp. sororia]

5.6e-54

81.82

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGG
        MSE+PKVIGM +DE+PK PFTWFSFLPKFD RLPLPIN GKKPPA  +DE  K  D +QKPEFVRFPKA LAV SVE EADVSGKTSNPAVIWQVYALGG
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGG

Query:  FLILSWAWARWKERRPQRRPDDED--EDSRDT
        FLILSWAWARWKERRP+RR DD+D  EDSRDT
Subjt:  FLILSWAWARWKERRPQRRPDDED--EDSRDT

XP_022938932.1 uncharacterized protein LOC111444995 [Cucurbita moschata]

3.7e-53

81.06

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGG
        MSE+PKVIGM +D +PK PFTWFSFLPKFD RLPLPIN GKKPPA  +DE  K  D +QKPEFVRFPKA LAV SVE EADVSGKTSNPAVIWQVYALGG
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGG

Query:  FLILSWAWARWKERRPQRRPDDED--EDSRDT
        FLILSWAWARWKERRP+RR DD+D  EDSRDT
Subjt:  FLILSWAWARWKERRPQRRPDDED--EDSRDT

XP_022993210.1 uncharacterized protein LOC111489298 [Cucurbita maxima]

9.6e-54

81.06

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGG
        MSESPKVIG+ ++E+PK PFTWFSFLPKFD RLPLPIN GKKPPA  +DE  K  +D+QKPEFVRFPKA LAV SVE EADVSGKTSNPAVIWQVYALGG
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGG

Query:  FLILSWAWARWKERRPQRRPDDED--EDSRDT
        FLILSWAWARWKERRP+RR DD+D  EDSRDT
Subjt:  FLILSWAWARWKERRPQRRPDDED--EDSRDT

XP_023550786.1 uncharacterized protein LOC111808822 isoform X1 [Cucurbita pepo subsp. pepo]

8.7e-55

82.58

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGG
        MSE+PKVIGM +DE+PK PFTWFSFLPKFD RLPLPIN GKKPPA  +DE  K  DD+QKPEFVRFPKA LAV SVE EADVSGKTSNPAVIWQVYALGG
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGG

Query:  FLILSWAWARWKERRPQRRPDDED--EDSRDT
        FLILSWAWARWKERRP+RR DD+D  EDSRDT
Subjt:  FLILSWAWARWKERRPQRRPDDED--EDSRDT

XP_023550789.1 uncharacterized protein LOC111808822 isoform X3 [Cucurbita pepo subsp. pepo]

8.7e-55

82.58

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGG
        MSE+PKVIGM +DE+PK PFTWFSFLPKFD RLPLPIN GKKPPA  +DE  K  DD+QKPEFVRFPKA LAV SVE EADVSGKTSNPAVIWQVYALGG
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGG

Query:  FLILSWAWARWKERRPQRRPDDED--EDSRDT
        FLILSWAWARWKERRP+RR DD+D  EDSRDT
Subjt:  FLILSWAWARWKERRPQRRPDDED--EDSRDT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSR5 Uncharacterized protein

9.7e-52

76.69

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Query:  MSESPKVIGMNDDE-TPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALG
        M ++PK + + +DE  PKSPF WFSFLPKFDFRLP P+N GKKPP   VDE+RK  +D+QKPEFVRFPKAEL V+SVEAEADVSGKTSNPAV+WQVYALG
Subjt:  MSESPKVIGMNDDE-TPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALG

Query:  GFLILSWAWARWKERRPQRR--PDDEDEDSRDT
        GFLILSWAWARWKERRPQRR   DDEDEDS D+
Subjt:  GFLILSWAWARWKERRPQRR--PDDEDEDSRDT

A0A1S3C3J3 uncharacterized protein LOC103496485

1.4e-50

76.52

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Query:  MSESPKVIGMNDDE-TPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALG
        M ++PK + M +DE  PKSPF WFSFLPKFDFRLP P+N GKK P   VDE RK  +D+QKPEFVRFPKAEL V+SVEAEADVSGKTSNPAV+WQVYALG
Subjt:  MSESPKVIGMNDDE-TPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALG

Query:  GFLILSWAWARWKERRPQRRPDDEDE-DSRDT
        GFLILSWAWARWKERRPQRR +D+DE DS DT
Subjt:  GFLILSWAWARWKERRPQRRPDDEDE-DSRDT

A0A5D3CKR2 Uncharacterized protein

1.4e-50

76.52

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Query:  MSESPKVIGMNDDE-TPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALG
        M ++PK + M +DE  PKSPF WFSFLPKFDFRLP P+N GKK P   VDE RK  +D+QKPEFVRFPKAEL V+SVEAEADVSGKTSNPAV+WQVYALG
Subjt:  MSESPKVIGMNDDE-TPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALG

Query:  GFLILSWAWARWKERRPQRRPDDEDE-DSRDT
        GFLILSWAWARWKERRPQRR +D+DE DS DT
Subjt:  GFLILSWAWARWKERRPQRRPDDEDE-DSRDT

A0A6J1FFF8 uncharacterized protein LOC111444995

1.8e-53

81.06

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGG
        MSE+PKVIGM +D +PK PFTWFSFLPKFD RLPLPIN GKKPPA  +DE  K  D +QKPEFVRFPKA LAV SVE EADVSGKTSNPAVIWQVYALGG
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGG

Query:  FLILSWAWARWKERRPQRRPDDED--EDSRDT
        FLILSWAWARWKERRP+RR DD+D  EDSRDT
Subjt:  FLILSWAWARWKERRPQRRPDDED--EDSRDT

A0A6J1JVP7 uncharacterized protein LOC111489298

4.7e-54

81.06

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGG
        MSESPKVIG+ ++E+PK PFTWFSFLPKFD RLPLPIN GKKPPA  +DE  K  +D+QKPEFVRFPKA LAV SVE EADVSGKTSNPAVIWQVYALGG
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGG

Query:  FLILSWAWARWKERRPQRRPDDED--EDSRDT
        FLILSWAWARWKERRP+RR DD+D  EDSRDT
Subjt:  FLILSWAWARWKERRPQRRPDDED--EDSRDT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G52230.1 unknown protein

4.7e-14

35.14

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Query:  MSESPKVIGMNDDETPKSPFTWFSFLPK-FDFRLPLPINDGKKPPAAAVDENRKVGDDSQKP-----EFVRFP-KAELAVSSVEAEAD-VSGKTSNPAVI
        M+E  +V   N  ++   P     F+   F F  P       KPP A +D N       ++P     E V FP     +   ++ EA+  SG+TSN  ++
Subjt:  MSESPKVIGMNDDETPKSPFTWFSFLPK-FDFRLPLPINDGKKPPAAAVDENRKVGDDSQKP-----EFVRFP-KAELAVSSVEAEAD-VSGKTSNPAVI

Query:  WQVYALGGFLILSWAWARWKERRPQ-----------RRPDDEDEDSRD
        WQVYALGGFL+L WAWARW ER  +           ++ DDED+ S D
Subjt:  WQVYALGGFLILSWAWARWKERRPQ-----------RRPDDEDEDSRD

Sequences

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CDS sequence

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ATGTCAGAGTCCCCAAAAGTTATTGGGATGAACGACGACGAGACCCCGAAATCCCCTTTCACTTGGTTCTCTTTCCTTCCCAAGTTCGACTTCCGATTGCCTCTTCCGAT
CAACGACGGCAAGAAACCACCGGCTGCGGCGGTTGATGAAAACCGGAAGGTTGGCGACGACTCGCAGAAGCCCGAGTTTGTCAGGTTTCCTAAAGCAGAGTTGGCCGTCT
CTTCGGTGGAGGCTGAAGCCGATGTCTCCGGCAAGACTTCCAATCCGGCGGTTATCTGGCAGGTATATGCTCTTGGTGGGTTTCTAATTTTGAGTTGGGCATGGGCAAGA
TGGAAGGAGAGAAGGCCCCAAAGACGTCCAGATGATGAGGATGAGGATTCCAGGGACACATAG

mRNA sequence

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Protein sequence

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MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGGFLILSWAWAR
WKERRPQRRPDDEDEDSRDT

Spg039221 (gene) of Sponge gourd (cylindrica) v1 genome