CuGenDBv2

Gene ID	Spg039231
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Protease-associated RING/U-box zinc finger family protein
Genome location	scaffold10:46987614..46989441
RNA-Seq Expression	Spg039231
Synteny	Spg039231
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6602714.1 hypothetical protein SDJN03_07947, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-60

86.01

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL
        +LPGIPKKQSPARLR DSASPLTSLLPLPP STT PSSKRFGFHDWRKSNRQ  QRDPFFDAF+ECSKEPSAA AAEQ+P A+LW+S  G NGKAVSRSL
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL

Query:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG
        SDRFGFLN YSSCKRTCGVSESIVY PR  RSSFDLLNHR GG
Subjt:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG

KAG7033401.1 hypothetical protein SDJN02_07457, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-60

86.01

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL
        +LPGIPKKQSPARLR DSASPLTSLLPLPP STT PSSKRFGFHDWRKSNRQ  QRDPFFDAF+ECSKEPSAA AAEQ+P A+LW+S  G NGKAVSRSL
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL

Query:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG
        SDRFGFLN YSSCKRTCGVSESIVY PR  RSSFDLLNHR GG
Subjt:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG

XP_022953683.1 uncharacterized protein LOC111456137 [Cucurbita moschata]

5.8e-60

86.01

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL
        +LPGIPKKQSPARLR DSASPLTSLLPLPP STT PSSKRFGFHDWRKSNRQ SQRDPFFDAF+ECSKEPSAA AAEQ+P A+LW+S  G NGKAVSRSL
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL

Query:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG
        SDRFGFLN  SSCKRTCGVSESIVY PR  RSSFDLLNHR GG
Subjt:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG

XP_023528120.1 uncharacterized protein LOC111791129 [Cucurbita pepo subsp. pepo]

2.6e-60

86.01

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL
        +LPGIPKKQSPARLR DSASPLTSLLPLPP STT PSSKRFGFHDWRKSNRQ SQRDPFFDAF+ECSKEPSAA AAEQ+P A+LW+S  G NGKAVSRSL
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL

Query:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG
        SDR GFLN YSSCKRTCGVSESIVY PR  RSSFDLLNHR GG
Subjt:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG

XP_038885392.1 uncharacterized protein LOC120075791 [Benincasa hispida]

1.2e-60

84.62

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL
        HLPGIPKKQSPARLRR SASPL+SLLPLPPNS TPPSSKRFGF DWRKSNRQ SQRDPFFDAF+ECSKEPS AAA +    A+LWS  GG NGKA++RSL
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL

Query:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG
        SDRFGFLNLYSSCKRTCGVSESIVYLPRT RSSFDLLN R+GG
Subjt:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQP3 Uncharacterized protein

9.0e-59

83.22

Show/hide

Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL
        HLPGIPKKQSPARLRR SASPL+S LPLPPNSTTP SSKRFGF DWRKSNRQ +QRDPFFDAF+ECSKEP+ AAA +    A+LWS  GG NGKA++RSL
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL

Query:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG
        SDRFGFLNLYSSCKRTCGVSESIVYLPRT+RSSFDLLN RTGG
Subjt:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG

A0A1S3B2H5 uncharacterized protein LOC103485423

1.3e-54

80.42

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL
        HLPGIPKKQSPARLRR SASPL+SLLPLPPNSTT  SSKRFGF DWRKSNRQ  QRDPFFDAF+ECSKEP+ AA       A+LWS  G  NGKA++RSL
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL

Query:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG
        SDRFGFLNLYSSCKRTCGVSESIVYLPRT  SSFDLLN R+GG
Subjt:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG

A0A5D3C8I6 Trinucleotide repeat-containing gene 18 protein-like protein

1.3e-54

80.42

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL
        HLPGIPKKQSPARLRR SASPL+SLLPLPPNSTT  SSKRFGF DWRKSNRQ  QRDPFFDAF+ECSKEP+ AA       A+LWS  G  NGKA++RSL
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL

Query:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG
        SDRFGFLNLYSSCKRTCGVSESIVYLPRT  SSFDLLN R+GG
Subjt:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG

A0A6J1GNZ5 uncharacterized protein LOC111456137

2.8e-60

86.01

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL
        +LPGIPKKQSPARLR DSASPLTSLLPLPP STT PSSKRFGFHDWRKSNRQ SQRDPFFDAF+ECSKEPSAA AAEQ+P A+LW+S  G NGKAVSRSL
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL

Query:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG
        SDRFGFLN  SSCKRTCGVSESIVY PR  RSSFDLLNHR GG
Subjt:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG

A0A6J1JTM6 uncharacterized protein LOC111487739

1.8e-59

84.62

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL
        +LPGIPKKQSPARLR DSASPLT LLPLPP ST  PSSKRFGFHDWRKSNRQ SQRDPFFDAF+ECSKEPSAA AAEQ+P A+LW+S  G NGKAVSRSL
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSL

Query:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG
        SDRFGFLN YSSCKRTC VSESIVY PR  RSSFDLLNHR+GG
Subjt:  SDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G22680.1 unknown protein

7.4e-13

39.44

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Query:  LPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSLS
        LPG PK+ S  R        L++LLPLPP+ +    + R      +K+    + RDPF  A +ECSK     A  + E         GG + K + +S S
Subjt:  LPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIECSKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSLS

Query:  DRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG
           G LNLYSSC+R C VSESIVYLP++  +S+D L+  T G
Subjt:  DRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG

AT1G71970.1 unknown protein

2.1e-15

38.36

Show/hide

Query:  LPGIPKKQSPARLRRDSASPLTSLLPLPP--NSTTPPSSKRFGFHDWRKSNR-QISQRDPFFDAFIECSKEPSAAAAAEQ-----EPAADLWSSAGGGNG
        LPG PK  S     R +      LLPLPP  N + P + K+   ++  K N   ++ +DPF  A +ECSK+    +  +      E     +    GG+ 
Subjt:  LPGIPKKQSPARLRRDSASPLTSLLPLPP--NSTTPPSSKRFGFHDWRKSNR-QISQRDPFFDAFIECSKEPSAAAAAEQ-----EPAADLWSSAGGGNG

Query:  KAVSR-SLSDRFGFLNLYSSCKRTCGVSESIVYLPRTQR-SSFDLL
        K +S+ S+ DRFG +NLY SC+RTC V+ESIVYLPR ++ +S+D L
Subjt:  KAVSR-SLSDRFGFLNLYSSCKRTCGVSESIVYLPRTQR-SSFDLL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTTCCGACCGGCTACCGGCTGAGCCGAGCCTCGAGAGAAGTGCAATGTTACCGGAAGCTAGGGCGAGAAAACCATGGCTTAACCACATGATCGATACGGATCTGCT
CTGCAGCGTTACAGGCCAGACGCATTTGCCTGGAATCCCCAAGAAACAGTCTCCGGCGAGGCTCCGCCGAGACTCCGCCTCTCCTCTGACCTCTCTCCTCCCCTTGCCTC
CCAATTCCACCACTCCGCCGTCCTCCAAGCGCTTCGGATTTCACGACTGGAGGAAATCGAACCGCCAAATTTCGCAGCGAGATCCTTTCTTCGACGCCTTCATCGAGTGC
TCTAAAGAACCTTCCGCCGCCGCCGCCGCCGAGCAAGAGCCGGCCGCCGACCTCTGGAGCAGCGCCGGCGGCGGCAATGGCAAGGCGGTTTCGAGAAGCCTGAGCGACCG
ATTCGGATTCTTGAATCTGTACTCTTCTTGCAAACGGACCTGCGGCGTTTCGGAATCCATAGTGTATCTTCCGAGAACGCAGAGGAGTTCGTTCGATCTGCTAAACCACC
GCACCGGCGGCTGA

mRNA sequence

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Protein sequence

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MASDRLPAEPSLERSAMLPEARARKPWLNHMIDTDLLCSVTGQTHLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQISQRDPFFDAFIEC
SKEPSAAAAAEQEPAADLWSSAGGGNGKAVSRSLSDRFGFLNLYSSCKRTCGVSESIVYLPRTQRSSFDLLNHRTGG

Spg039231 (gene) of Sponge gourd (cylindrica) v1 genome