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Spg039273 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039273
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold10:46537327..46538096
RNA-Seq ExpressionSpg039273
SyntenySpg039273
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5516234.1 hypothetical protein DKX38_026882 [Salix brachista]7.8e-0855.56Show/hide
Query:  STTDNGGLGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLL
        S  ++ GLGAGV GGGA+ + N R A S AR  P+ RI Q PDQW+ HSGS H L    LHLL
Subjt:  STTDNGGLGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLL

KAB5520928.1 hypothetical protein DKX38_025247 [Salix brachista]3.1e-0441.18Show/hide
Query:  STTDNGGLGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLLVGRRC
        S  ++ GLG G+ GGGA+ + N R A SD     +  + Q  DQW++H+GS   L C +LH LV   C
Subjt:  STTDNGGLGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLLVGRRC

KAF4390554.1 hypothetical protein F8388_006051 [Cannabis sativa]4.0e-0447.06Show/hide
Query:  LGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLLVGRRCSCLYGLL
        LG  VRG GA+R+ NPR A   +R   +  +RQ PDQW  HS SF SL    LHLL   + S L+ L+
Subjt:  LGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLLVGRRCSCLYGLL

PON95392.1 hypothetical protein TorRG33x02_089140, partial [Trema orientale]3.9e-0750Show/hide
Query:  GLGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLLVGR
        GLGA  RGGG + +PN     SD+RQ  +RR+ Q  ++W+ HSGSF  LFC +L+L V R
Subjt:  GLGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLLVGR

TrEMBL top hitse value%identityAlignment
A0A2P5FC85 Uncharacterized protein (Fragment)1.9e-0750Show/hide
Query:  GLGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLLVGR
        GLGA  RGGG + +PN     SD+RQ  +RR+ Q  ++W+ HSGSF  LFC +L+L V R
Subjt:  GLGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLLVGR

A0A5N5JE92 Uncharacterized protein3.8e-0855.56Show/hide
Query:  STTDNGGLGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLL
        S  ++ GLGAGV GGGA+ + N R A S AR  P+ RI Q PDQW+ HSGS H L    LHLL
Subjt:  STTDNGGLGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLL

A0A5N5JNH3 Uncharacterized protein1.5e-0441.18Show/hide
Query:  STTDNGGLGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLLVGRRC
        S  ++ GLG G+ GGGA+ + N R A SD     +  + Q  DQW++H+GS   L C +LH LV   C
Subjt:  STTDNGGLGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLLVGRRC

A0A7J6H5N7 Uncharacterized protein1.9e-0447.06Show/hide
Query:  LGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLLVGRRCSCLYGLL
        LG  VRG GA+R+ NPR A   +R   +  +RQ PDQW  HS SF SL    LHLL   + S L+ L+
Subjt:  LGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLLVGRRCSCLYGLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATTGTCATCCAAGATATAAGTAAGCTTGGCCTTTCCAACTCATCCATCCACCATGCCTTTGTCCTTTTCTCAACCACTATAAGCCCAGCCCTTGAAGCCTTTCG
TCTTCCTCAATTCATTTCCACAACCGACAATGGCGGATTGGGGGCCGGTGTTCGTGGCGGTGGTGCTCTTCGTTCTCCTAACCCCCGGCCTGCTGGTTCAGATGCCCGGC
AAGACCCGCTTCGTCGAATTCGGCAATTTCCAGACCAGTGGACTCTCCATTCTGGTTCATTCCATTCTCTATTTTGCCCTAATCTGCATCTTCTTGTTGGCCGTCGGTGT
TCATGTCTATATGGGCTCTTGATTTCTACATCTATTCTATCTTCTCTTCACCTAATCGTGTTTCTTTCATCTGGGTTTTCATTTTATAGCTCTGTATCAAAGGGAGATTC
GTTTCATCTGTATGCTCTGTTTTCCAATCTGTTGTCTCAATTTGACGAATTTGATTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGATTGTCATCCAAGATATAAGTAAGCTTGGCCTTTCCAACTCATCCATCCACCATGCCTTTGTCCTTTTCTCAACCACTATAAGCCCAGCCCTTGAAGCCTTTCG
TCTTCCTCAATTCATTTCCACAACCGACAATGGCGGATTGGGGGCCGGTGTTCGTGGCGGTGGTGCTCTTCGTTCTCCTAACCCCCGGCCTGCTGGTTCAGATGCCCGGC
AAGACCCGCTTCGTCGAATTCGGCAATTTCCAGACCAGTGGACTCTCCATTCTGGTTCATTCCATTCTCTATTTTGCCCTAATCTGCATCTTCTTGTTGGCCGTCGGTGT
TCATGTCTATATGGGCTCTTGATTTCTACATCTATTCTATCTTCTCTTCACCTAATCGTGTTTCTTTCATCTGGGTTTTCATTTTATAGCTCTGTATCAAAGGGAGATTC
GTTTCATCTGTATGCTCTGTTTTCCAATCTGTTGTCTCAATTTGACGAATTTGATTCCTGA
Protein sequenceShow/hide protein sequence
MMIVIQDISKLGLSNSSIHHAFVLFSTTISPALEAFRLPQFISTTDNGGLGAGVRGGGALRSPNPRPAGSDARQDPLRRIRQFPDQWTLHSGSFHSLFCPNLHLLVGRRC
SCLYGLLISTSILSSLHLIVFLSSGFSFYSSVSKGDSFHLYALFSNLLSQFDEFDS