; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039278 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039278
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDefective in cullin neddylation protein
Genome locationscaffold10:41195211..41200386
RNA-Seq ExpressionSpg039278
SyntenySpg039278
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR014764 - Defective-in-cullin neddylation protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602497.1 DCN1-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2250.34Show/hide
Query:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD---------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSS
        QI  +   IRSQNG CHGN   GHVETQMAKS KQALA+LLIYVQSSL  G   +H +          +D SEFSRFYEFVFFVCRENGQKNI    +  
Subjt:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD---------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSS

Query:  LFSSWGWIVSDGVC-----WVSF------SSCSDDTTVKVWDFARCQEE
           +W  +V DG       W  F       + S+DT ++V  F+RC  E
Subjt:  LFSSWGWIVSDGVC-----WVSF------SSCSDDTTVKVWDFARCQEE
XP_022955115.1 uncharacterized protein LOC111457165 isoform X3 [Cucurbita moschata]2.8e-2250.34Show/hide
Query:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD---------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSS
        QI  +   IRSQNG CHGN   GHVETQMAKS KQALA+LLIYVQSSL  G   +H +          +D SEFSRFYEFVFFVCRENGQKNI    +  
Subjt:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD---------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSS

Query:  LFSSWGWIVSDGVC-----WVSF------SSCSDDTTVKVWDFARCQEE
           +W  +V DG       W  F       + S+DT ++V  F+RC  E
Subjt:  LFSSWGWIVSDGVC-----WVSF------SSCSDDTTVKVWDFARCQEE
XP_038890437.1 uncharacterized protein LOC120080000 isoform X1 [Benincasa hispida]1.7e-2451.68Show/hide
Query:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG------------YIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLS
        QI  +  +IRSQNGFCHGNE+SG VETQMAKS KQALA+LLIYVQSSLQMG            Y++ + +D SEFSRFYEFVFFVCRENGQKNI    +S
Subjt:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG------------YIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLS

Query:  SLFSSWGWIVSDGV----CWVSF------SSCSDDTTVKVWDFARCQEE
            +W  +++        W  F       + S+DT  +V  F+RC  E
Subjt:  SLFSSWGWIVSDGV----CWVSF------SSCSDDTTVKVWDFARCQEE
XP_038890438.1 uncharacterized protein LOC120080000 isoform X2 [Benincasa hispida]1.0e-2453.52Show/hide
Query:  NIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG------------YIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWG
        NIRSQNGFCHGNE+SG VETQMAKS KQALA+LLIYVQSSLQMG            Y++ + +D SEFSRFYEFVFFVCRENGQKNI    +S    +W 
Subjt:  NIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG------------YIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWG

Query:  WIVSDGV----CWVSF------SSCSDDTTVKVWDFARCQEE
         +++        W  F       + S+DT  +V  F+RC  E
Subjt:  WIVSDGV----CWVSF------SSCSDDTTVKVWDFARCQEE
XP_038890439.1 DCN1-like protein 2 isoform X3 [Benincasa hispida]1.7e-2451.68Show/hide
Query:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG------------YIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLS
        QI  +  +IRSQNGFCHGNE+SG VETQMAKS KQALA+LLIYVQSSLQMG            Y++ + +D SEFSRFYEFVFFVCRENGQKNI    +S
Subjt:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG------------YIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLS

Query:  SLFSSWGWIVSDGV----CWVSF------SSCSDDTTVKVWDFARCQEE
            +W  +++        W  F       + S+DT  +V  F+RC  E
Subjt:  SLFSSWGWIVSDGV----CWVSF------SSCSDDTTVKVWDFARCQEE
TrEMBL top hitse value%identityAlignment
A0A0A0KU82 Defective in cullin neddylation protein5.1e-2251.33Show/hide
Query:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG------------YIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLS
        QI  +  +IRSQNG+ HGNEDSG+ ETQM KS KQALA+LLIYVQSSLQMG            Y++ + +D SEFSRFYEFVFFVCRENGQKNI    +S
Subjt:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG------------YIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLS

Query:  SLFSSWGWIVSDGVC-----WVSF------SSCSDDTTVKVWDFARCQEE
            +W  +V DG       W  F       + S+DT  +V  F+RC  E
Subjt:  SLFSSWGWIVSDGVC-----WVSF------SSCSDDTTVKVWDFARCQEE
A0A6J1BYJ7 Defective in cullin neddylation protein6.7e-2250.67Show/hide
Query:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG------------YIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLS
        QI  +  +IRSQNGFC GNEDS HVETQ+AKS K+ALA LL YVQSSLQMG            Y++ + +D SEFSRFYEFVFFVCRENGQKNI    + 
Subjt:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG------------YIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLS

Query:  SLFSSWGWIVSDGVC-----WVSF------SSCSDDTTVKVWDFARCQEE
            +W  +V DG       W +F       + S+DT  +V  F+RC  E
Subjt:  SLFSSWGWIVSDGVC-----WVSF------SSCSDDTTVKVWDFARCQEE
A0A6J1GSP1 Defective in cullin neddylation protein1.3e-2250.34Show/hide
Query:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD---------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSS
        QI  +   IRSQNG CHGN   GHVETQMAKS KQALA+LLIYVQSSL  G   +H +          +D SEFSRFYEFVFFVCRENGQKNI    +  
Subjt:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD---------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSS

Query:  LFSSWGWIVSDGVC-----WVSF------SSCSDDTTVKVWDFARCQEE
           +W  +V DG       W  F       + S+DT ++V  F+RC  E
Subjt:  LFSSWGWIVSDGVC-----WVSF------SSCSDDTTVKVWDFARCQEE
A0A6J1GU86 Defective in cullin neddylation protein1.3e-2250.34Show/hide
Query:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD---------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSS
        QI  +   IRSQNG CHGN   GHVETQMAKS KQALA+LLIYVQSSL  G   +H +          +D SEFSRFYEFVFFVCRENGQKNI    +  
Subjt:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD---------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSS

Query:  LFSSWGWIVSDGVC-----WVSF------SSCSDDTTVKVWDFARCQEE
           +W  +V DG       W  F       + S+DT ++V  F+RC  E
Subjt:  LFSSWGWIVSDGVC-----WVSF------SSCSDDTTVKVWDFARCQEE
A0A6J1GUA1 Defective in cullin neddylation protein1.3e-2250.34Show/hide
Query:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD---------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSS
        QI  +   IRSQNG CHGN   GHVETQMAKS KQALA+LLIYVQSSL  G   +H +          +D SEFSRFYEFVFFVCRENGQKNI    +  
Subjt:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD---------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSS

Query:  LFSSWGWIVSDGVC-----WVSF------SSCSDDTTVKVWDFARCQEE
           +W  +V DG       W  F       + S+DT ++V  F+RC  E
Subjt:  LFSSWGWIVSDGVC-----WVSF------SSCSDDTTVKVWDFARCQEE
SwissProt top hitse value%identityAlignment
Q6NLV4 Flowering time control protein FY2.1e-0465.52Show/hide
Query:  VSFSSCSDDTTVKVWDFARCQEERSLSGN
        + F SCSDDTTVKVWDF +C +E SL+G+
Subjt:  VSFSSCSDDTTVKVWDFARCQEERSLSGN
Q9MBG8 Defective in cullin neddylation protein AAR34.5e-0731.08Show/hide
Query:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQ---------MGYIHSVD--IDLSEFSRFYEFVFFVCRENGQKNINGDCLSS
        +I  R   IRS    C+     G  E+Q     K+A+  LL  V++  Q            +  +D  +D +EF+ FY+FVFF+CRENGQKNI    +S 
Subjt:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQ---------MGYIHSVD--IDLSEFSRFYEFVFFVCRENGQKNINGDCLSS

Query:  LFSSWGWIVSDGV----CWVSF------SSCSDDTTVKVWDFARCQEE
          ++W  +++        W  F       + S+DT  +V  F+RC  E
Subjt:  LFSSWGWIVSDGV----CWVSF------SSCSDDTTVKVWDFARCQEE
Arabidopsis top hitse value%identityAlignment
AT3G28970.1 Domain of unknown function (DUF298)3.2e-0831.08Show/hide
Query:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQ---------MGYIHSVD--IDLSEFSRFYEFVFFVCRENGQKNINGDCLSS
        +I  R   IRS    C+     G  E+Q     K+A+  LL  V++  Q            +  +D  +D +EF+ FY+FVFF+CRENGQKNI    +S 
Subjt:  QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQ---------MGYIHSVD--IDLSEFSRFYEFVFFVCRENGQKNINGDCLSS

Query:  LFSSWGWIVSDGV----CWVSF------SSCSDDTTVKVWDFARCQEE
          ++W  +++        W  F       + S+DT  +V  F+RC  E
Subjt:  LFSSWGWIVSDGV----CWVSF------SSCSDDTTVKVWDFARCQEE
AT5G13480.1 Transducin/WD40 repeat-like superfamily protein1.5e-0565.52Show/hide
Query:  VSFSSCSDDTTVKVWDFARCQEERSLSGN
        + F SCSDDTTVKVWDF +C +E SL+G+
Subjt:  VSFSSCSDDTTVKVWDFARCQEERSLSGN
AT5G13480.2 Transducin/WD40 repeat-like superfamily protein1.5e-0565.52Show/hide
Query:  VSFSSCSDDTTVKVWDFARCQEERSLSGN
        + F SCSDDTTVKVWDF +C +E SL+G+
Subjt:  VSFSSCSDDTTVKVWDFARCQEERSLSGN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAATTTAGTAACCGCAATGGATGATCTAAAGAAATCGTTGGATGAATTGTTGAGACTGTACCACACACTTCAACAACCATTATTGTCGGATGAATTTTTGAGAGT
GTACCACACATTTCAACAACGATTAGAAACGGTGCAATCCGCCGATGATTTCCTGAATGACCCGATCACATTTCAACAAATATTAGAAACGGTGCAATCCGCCAATGGTT
TCCTGAATGACCCGATCCAAGGTGGTGGTGGTGGTGGTGGTGGTGGCCAAACTTCTTCAGTACGCCCAGATGATCAAGAAATCCAAGATGGTGGCGGTGGCCAGATCCGT
TGCAGACTGCGAAATATTCGATCTCAAAATGGCTTTTGTCATGGGAATGAAGACTCTGGACATGTTGAAACACAAATGGCTAAAAGTTTAAAGCAAGCACTTGCAGATCT
ATTAATATATGTGCAATCATCACTGCAGATGGGGTATATTCACTCTGTAGACATAGACTTGTCTGAATTTTCACGCTTCTACGAGTTTGTTTTCTTTGTGTGCCGTGAAA
ATGGTCAAAAGAATATCAATGGTGATTGTCTTTCATCATTATTTTCTTCGTGGGGCTGGATTGTATCTGATGGTGTTTGTTGGGTGTCATTTTCTTCCTGCTCTGATGAT
ACTACTGTCAAAGTTTGGGACTTTGCTCGGTGCCAAGAAGAGCGTTCTTTGTCTGGTAATGTGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATAATTTAGTAACCGCAATGGATGATCTAAAGAAATCGTTGGATGAATTGTTGAGACTGTACCACACACTTCAACAACCATTATTGTCGGATGAATTTTTGAGAGT
GTACCACACATTTCAACAACGATTAGAAACGGTGCAATCCGCCGATGATTTCCTGAATGACCCGATCACATTTCAACAAATATTAGAAACGGTGCAATCCGCCAATGGTT
TCCTGAATGACCCGATCCAAGGTGGTGGTGGTGGTGGTGGTGGTGGCCAAACTTCTTCAGTACGCCCAGATGATCAAGAAATCCAAGATGGTGGCGGTGGCCAGATCCGT
TGCAGACTGCGAAATATTCGATCTCAAAATGGCTTTTGTCATGGGAATGAAGACTCTGGACATGTTGAAACACAAATGGCTAAAAGTTTAAAGCAAGCACTTGCAGATCT
ATTAATATATGTGCAATCATCACTGCAGATGGGGTATATTCACTCTGTAGACATAGACTTGTCTGAATTTTCACGCTTCTACGAGTTTGTTTTCTTTGTGTGCCGTGAAA
ATGGTCAAAAGAATATCAATGGTGATTGTCTTTCATCATTATTTTCTTCGTGGGGCTGGATTGTATCTGATGGTGTTTGTTGGGTGTCATTTTCTTCCTGCTCTGATGAT
ACTACTGTCAAAGTTTGGGACTTTGCTCGGTGCCAAGAAGAGCGTTCTTTGTCTGGTAATGTGCTTTGA
Protein sequenceShow/hide protein sequence
MNNLVTAMDDLKKSLDELLRLYHTLQQPLLSDEFLRVYHTFQQRLETVQSADDFLNDPITFQQILETVQSANGFLNDPIQGGGGGGGGGQTSSVRPDDQEIQDGGGGQIR
CRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMGYIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWGWIVSDGVCWVSFSSCSDD
TTVKVWDFARCQEERSLSGNVL